Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120615.seq
(694 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC003357-1|AAH03357.2| 218|Homo sapiens HDDC2 protein protein. 103 5e-22
AF529363-1|AAQ09597.1| 204|Homo sapiens NS5ATP2 protein. 103 5e-22
BC066332-1|AAH66332.1| 204|Homo sapiens HD domain containing 2 ... 102 1e-21
AF151888-1|AAD34125.1| 170|Homo sapiens CGI-130 protein protein. 59 2e-08
AL121938-2|CAI19646.1| 170|Homo sapiens HD domain containing 2 ... 58 2e-08
BC001671-1|AAH01671.1| 71|Homo sapiens HDDC2 protein protein. 40 0.008
X14298-1|CAA32479.1| 3685|Homo sapiens protein ( Human mRNA for ... 34 0.55
AL451144-4|CAI39566.1| 3685|Homo sapiens dystrophin (muscular dy... 34 0.55
AL139278-1|CAI42991.1| 3685|Homo sapiens dystrophin (muscular dy... 34 0.55
AL109609-3|CAI42950.1| 3685|Homo sapiens dystrophin (muscular dy... 34 0.55
AL096699-2|CAI42225.1| 3685|Homo sapiens dystrophin (muscular dy... 34 0.55
AL031643-3|CAI43058.1| 3685|Homo sapiens dystrophin (muscular dy... 34 0.55
AL031542-2|CAI42229.1| 3685|Homo sapiens dystrophin (muscular dy... 34 0.55
BC038515-1|AAH38515.1| 796|Homo sapiens CCDC110 protein protein. 30 9.0
>BC003357-1|AAH03357.2| 218|Homo sapiens HDDC2 protein protein.
Length = 218
Score = 103 bits (248), Expect = 5e-22
Identities = 49/94 (52%), Positives = 70/94 (74%), Gaps = 1/94 (1%)
Frame = +1
Query: 238 IGQNKILQIALIHDLAECIVGDLTPHCGVSPEEKHRREDEAMKTISG-LTGIAGDRMYEL 414
+ +++ +++AL+HD+AECIVGD+ P + EEKHRRE+EAMK I+ L +YEL
Sbjct: 79 LNKDRCVRLALVHDMAECIVGDIAPADNIPKEEKHRREEEAMKQITQLLPEDLRKELYEL 138
Query: 415 YKEYEDQSSPEAKFAKDLDRYDMILQAFEYENVK 516
++EYE QSS EAKF K LD+ +MILQA EYE+++
Sbjct: 139 WEEYETQSSAEAKFVKQLDQCEMILQASEYEDLE 172
Score = 39.9 bits (89), Expect = 0.008
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +2
Query: 74 SRIKLLFITQYFSKKHVKRTGWILCDINDCETIAGHMYRMGIMTFLLTEE 223
+R L F+ K V RTGW+ ++ E+++ HMYRM +M ++ ++
Sbjct: 28 ARSLLQFLRLVGQLKRVPRTGWVYRNVQRPESVSDHMYRMAVMAMVIKDD 77
Score = 37.9 bits (84), Expect = 0.034
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 513 ENTPKKCQEFFTATEGKFDHPFIQDLVKELYLQR 614
E+ P + Q+F+ +T GKF+HP I LV EL +R
Sbjct: 172 EHKPGRLQDFYDSTAGKFNHPEIVQLVSELEAER 205
>AF529363-1|AAQ09597.1| 204|Homo sapiens NS5ATP2 protein.
Length = 204
Score = 103 bits (248), Expect = 5e-22
Identities = 49/94 (52%), Positives = 70/94 (74%), Gaps = 1/94 (1%)
Frame = +1
Query: 238 IGQNKILQIALIHDLAECIVGDLTPHCGVSPEEKHRREDEAMKTISG-LTGIAGDRMYEL 414
+ +++ +++AL+HD+AECIVGD+ P + EEKHRRE+EAMK I+ L +YEL
Sbjct: 65 LNKDRCVRLALVHDMAECIVGDIAPADNIPKEEKHRREEEAMKQITQLLPEDLRKELYEL 124
Query: 415 YKEYEDQSSPEAKFAKDLDRYDMILQAFEYENVK 516
++EYE QSS EAKF K LD+ +MILQA EYE+++
Sbjct: 125 WEEYETQSSAEAKFVKQLDQCEMILQASEYEDLE 158
Score = 39.9 bits (89), Expect = 0.008
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +2
Query: 74 SRIKLLFITQYFSKKHVKRTGWILCDINDCETIAGHMYRMGIMTFLLTEE 223
+R L F+ K V RTGW+ ++ E+++ HMYRM +M ++ ++
Sbjct: 14 ARSLLQFLRLVGQLKRVPRTGWVYRNVQRPESVSDHMYRMAVMAMVIKDD 63
Score = 37.9 bits (84), Expect = 0.034
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 513 ENTPKKCQEFFTATEGKFDHPFIQDLVKELYLQR 614
E+ P + Q+F+ +T GKF+HP I LV EL +R
Sbjct: 158 EHKPGRLQDFYDSTAGKFNHPEIVQLVSELEAER 191
>BC066332-1|AAH66332.1| 204|Homo sapiens HD domain containing 2
protein.
Length = 204
Score = 102 bits (244), Expect = 1e-21
Identities = 48/94 (51%), Positives = 70/94 (74%), Gaps = 1/94 (1%)
Frame = +1
Query: 238 IGQNKILQIALIHDLAECIVGDLTPHCGVSPEEKHRREDEAMKTISG-LTGIAGDRMYEL 414
+ +++ +++AL+HD+AECIVGD+ P + EEKHRRE+EAMK I+ L +YEL
Sbjct: 65 LNKDRCVRLALVHDMAECIVGDIAPADNIPKEEKHRREEEAMKQITQLLPEDLRKELYEL 124
Query: 415 YKEYEDQSSPEAKFAKDLDRYDMILQAFEYENVK 516
++EYE +SS EAKF K LD+ +MILQA EYE+++
Sbjct: 125 WEEYETRSSAEAKFVKQLDQCEMILQASEYEDLE 158
Score = 39.9 bits (89), Expect = 0.008
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +2
Query: 74 SRIKLLFITQYFSKKHVKRTGWILCDINDCETIAGHMYRMGIMTFLLTEE 223
+R L F+ K V RTGW+ ++ E+++ HMYRM +M ++ ++
Sbjct: 14 ARSLLQFLRLVGQLKRVPRTGWVYRNVQRPESVSDHMYRMAVMAMVIKDD 63
Score = 37.9 bits (84), Expect = 0.034
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 513 ENTPKKCQEFFTATEGKFDHPFIQDLVKELYLQR 614
E+ P + Q+F+ +T GKF+HP I LV EL +R
Sbjct: 158 EHKPGRLQDFYDSTAGKFNHPEIVQLVSELEAER 191
>AF151888-1|AAD34125.1| 170|Homo sapiens CGI-130 protein protein.
Length = 170
Score = 58.8 bits (136), Expect = 2e-08
Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Frame = +1
Query: 322 VSPEEKHRREDEAMKTISGLTGI-AGDRMYELYKEYEDQSSPEAKFAKDLDRYDMILQAF 498
V +++ ++ EAMK I+ L +YEL++EYE QSS EAKF K LD+ +MILQA
Sbjct: 59 VIKDDRLNKDPEAMKQITQLLPEDLRKELYELWEEYETQSSAEAKFVKQLDQCEMILQAS 118
Query: 499 EYENVK 516
EYE+++
Sbjct: 119 EYEDLE 124
Score = 39.9 bits (89), Expect = 0.008
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +2
Query: 74 SRIKLLFITQYFSKKHVKRTGWILCDINDCETIAGHMYRMGIMTFLLTEE 223
+R L F+ K V RTGW+ ++ E+++ HMYRM +M ++ ++
Sbjct: 14 ARSLLQFLRLVGQLKRVPRTGWVYRNVQRPESVSDHMYRMAVMAMVIKDD 63
Score = 37.9 bits (84), Expect = 0.034
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 513 ENTPKKCQEFFTATEGKFDHPFIQDLVKELYLQR 614
E+ P + Q+F+ +T GKF+HP I LV EL +R
Sbjct: 124 EHKPGRLQDFYDSTAGKFNHPEIVQLVSELEAER 157
>AL121938-2|CAI19646.1| 170|Homo sapiens HD domain containing 2
protein.
Length = 170
Score = 58.4 bits (135), Expect = 2e-08
Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Frame = +1
Query: 322 VSPEEKHRREDEAMKTISGLTGI-AGDRMYELYKEYEDQSSPEAKFAKDLDRYDMILQAF 498
V +++ ++ EAMK I+ L +YEL++EYE QSS EAKF K LD+ +MILQA
Sbjct: 59 VIKDDRLNKDREAMKQITQLLPEDLRKELYELWEEYETQSSAEAKFVKQLDQCEMILQAS 118
Query: 499 EYENVK 516
EYE+++
Sbjct: 119 EYEDLE 124
Score = 39.9 bits (89), Expect = 0.008
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +2
Query: 74 SRIKLLFITQYFSKKHVKRTGWILCDINDCETIAGHMYRMGIMTFLLTEE 223
+R L F+ K V RTGW+ ++ E+++ HMYRM +M ++ ++
Sbjct: 14 ARSLLQFLRLVGQLKRVPRTGWVYRNVQRPESVSDHMYRMAVMAMVIKDD 63
Score = 37.9 bits (84), Expect = 0.034
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 513 ENTPKKCQEFFTATEGKFDHPFIQDLVKELYLQR 614
E+ P + Q+F+ +T GKF+HP I LV EL +R
Sbjct: 124 EHKPGRLQDFYDSTAGKFNHPEIVQLVSELEAER 157
>BC001671-1|AAH01671.1| 71|Homo sapiens HDDC2 protein protein.
Length = 71
Score = 39.9 bits (89), Expect = 0.008
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +2
Query: 74 SRIKLLFITQYFSKKHVKRTGWILCDINDCETIAGHMYRMGIMTFLLTEE 223
+R L F+ K V RTGW+ ++ E+++ HMYRM +M ++ ++
Sbjct: 14 ARSLLQFLRLVGQLKRVPRTGWVYRNVQRPESVSDHMYRMAVMAMVIKDD 63
>X14298-1|CAA32479.1| 3685|Homo sapiens protein ( Human mRNA for
dystrophin. ).
Length = 3685
Score = 33.9 bits (74), Expect = 0.55
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +1
Query: 283 AECIVGDLTPHCGVSPEE--KHRREDEAMKTISGLTGIAGDRMYELYKEYEDQSSPEAKF 456
A+ I DLT H +S EE KH + EA + + +A ++ ++ ++ P A F
Sbjct: 1410 AQKIQSDLTSH-EISLEEMKKHNQGKEAAQRVLSQIDVAQKKLQDVSMKFRLFQKP-ANF 1467
Query: 457 AKDLDRYDMILQAFEYENVKILQRNVKSSLLQQRENLTTRLYK 585
+ L MIL + + ++V+ ++Q + N LYK
Sbjct: 1468 EQRLQESKMILDEVKMHLPALETKSVEQEVVQSQLNHCVNLYK 1510
>AL451144-4|CAI39566.1| 3685|Homo sapiens dystrophin (muscular
dystrophy, Duchenne and Becker types) protein.
Length = 3685
Score = 33.9 bits (74), Expect = 0.55
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +1
Query: 283 AECIVGDLTPHCGVSPEE--KHRREDEAMKTISGLTGIAGDRMYELYKEYEDQSSPEAKF 456
A+ I DLT H +S EE KH + EA + + +A ++ ++ ++ P A F
Sbjct: 1410 AQKIQSDLTSH-EISLEEMKKHNQGKEAAQRVLSQIDVAQKKLQDVSMKFRLFQKP-ANF 1467
Query: 457 AKDLDRYDMILQAFEYENVKILQRNVKSSLLQQRENLTTRLYK 585
+ L MIL + + ++V+ ++Q + N LYK
Sbjct: 1468 EQRLQESKMILDEVKMHLPALETKSVEQEVVQSQLNHCVNLYK 1510
>AL139278-1|CAI42991.1| 3685|Homo sapiens dystrophin (muscular
dystrophy, Duchenne and Becker types) protein.
Length = 3685
Score = 33.9 bits (74), Expect = 0.55
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +1
Query: 283 AECIVGDLTPHCGVSPEE--KHRREDEAMKTISGLTGIAGDRMYELYKEYEDQSSPEAKF 456
A+ I DLT H +S EE KH + EA + + +A ++ ++ ++ P A F
Sbjct: 1410 AQKIQSDLTSH-EISLEEMKKHNQGKEAAQRVLSQIDVAQKKLQDVSMKFRLFQKP-ANF 1467
Query: 457 AKDLDRYDMILQAFEYENVKILQRNVKSSLLQQRENLTTRLYK 585
+ L MIL + + ++V+ ++Q + N LYK
Sbjct: 1468 EQRLQESKMILDEVKMHLPALETKSVEQEVVQSQLNHCVNLYK 1510
>AL109609-3|CAI42950.1| 3685|Homo sapiens dystrophin (muscular
dystrophy, Duchenne and Becker types) protein.
Length = 3685
Score = 33.9 bits (74), Expect = 0.55
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +1
Query: 283 AECIVGDLTPHCGVSPEE--KHRREDEAMKTISGLTGIAGDRMYELYKEYEDQSSPEAKF 456
A+ I DLT H +S EE KH + EA + + +A ++ ++ ++ P A F
Sbjct: 1410 AQKIQSDLTSH-EISLEEMKKHNQGKEAAQRVLSQIDVAQKKLQDVSMKFRLFQKP-ANF 1467
Query: 457 AKDLDRYDMILQAFEYENVKILQRNVKSSLLQQRENLTTRLYK 585
+ L MIL + + ++V+ ++Q + N LYK
Sbjct: 1468 EQRLQESKMILDEVKMHLPALETKSVEQEVVQSQLNHCVNLYK 1510
>AL096699-2|CAI42225.1| 3685|Homo sapiens dystrophin (muscular
dystrophy, Duchenne and Becker types) protein.
Length = 3685
Score = 33.9 bits (74), Expect = 0.55
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +1
Query: 283 AECIVGDLTPHCGVSPEE--KHRREDEAMKTISGLTGIAGDRMYELYKEYEDQSSPEAKF 456
A+ I DLT H +S EE KH + EA + + +A ++ ++ ++ P A F
Sbjct: 1410 AQKIQSDLTSH-EISLEEMKKHNQGKEAAQRVLSQIDVAQKKLQDVSMKFRLFQKP-ANF 1467
Query: 457 AKDLDRYDMILQAFEYENVKILQRNVKSSLLQQRENLTTRLYK 585
+ L MIL + + ++V+ ++Q + N LYK
Sbjct: 1468 EQRLQESKMILDEVKMHLPALETKSVEQEVVQSQLNHCVNLYK 1510
>AL031643-3|CAI43058.1| 3685|Homo sapiens dystrophin (muscular
dystrophy, Duchenne and Becker types) protein.
Length = 3685
Score = 33.9 bits (74), Expect = 0.55
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +1
Query: 283 AECIVGDLTPHCGVSPEE--KHRREDEAMKTISGLTGIAGDRMYELYKEYEDQSSPEAKF 456
A+ I DLT H +S EE KH + EA + + +A ++ ++ ++ P A F
Sbjct: 1410 AQKIQSDLTSH-EISLEEMKKHNQGKEAAQRVLSQIDVAQKKLQDVSMKFRLFQKP-ANF 1467
Query: 457 AKDLDRYDMILQAFEYENVKILQRNVKSSLLQQRENLTTRLYK 585
+ L MIL + + ++V+ ++Q + N LYK
Sbjct: 1468 EQRLQESKMILDEVKMHLPALETKSVEQEVVQSQLNHCVNLYK 1510
>AL031542-2|CAI42229.1| 3685|Homo sapiens dystrophin (muscular
dystrophy, Duchenne and Becker types) protein.
Length = 3685
Score = 33.9 bits (74), Expect = 0.55
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +1
Query: 283 AECIVGDLTPHCGVSPEE--KHRREDEAMKTISGLTGIAGDRMYELYKEYEDQSSPEAKF 456
A+ I DLT H +S EE KH + EA + + +A ++ ++ ++ P A F
Sbjct: 1410 AQKIQSDLTSH-EISLEEMKKHNQGKEAAQRVLSQIDVAQKKLQDVSMKFRLFQKP-ANF 1467
Query: 457 AKDLDRYDMILQAFEYENVKILQRNVKSSLLQQRENLTTRLYK 585
+ L MIL + + ++V+ ++Q + N LYK
Sbjct: 1468 EQRLQESKMILDEVKMHLPALETKSVEQEVVQSQLNHCVNLYK 1510
>BC038515-1|AAH38515.1| 796|Homo sapiens CCDC110 protein protein.
Length = 796
Score = 29.9 bits (64), Expect = 9.0
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 11/94 (11%)
Frame = +1
Query: 322 VSPEEKHRREDE-------AMKTISGLTGI----AGDRMYELYKEYEDQSSPEAKFAKDL 468
+SPE++HR EDE A K ++ G+ D Y E E+Q P++ K L
Sbjct: 1 MSPEKQHREEDEVDSVLLSASKILNSSEGVKESGCSDTEYGCIAESENQIQPQSAL-KVL 59
Query: 469 DRYDMILQAFEYENVKILQRNVKSSLLQQRENLT 570
+ L++F+ ++ LQ NV Q ENL+
Sbjct: 60 QQQ---LESFQALRMQTLQ-NVSMPTENQEENLS 89
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,646,293
Number of Sequences: 237096
Number of extensions: 1838463
Number of successful extensions: 3912
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3909
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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