Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120613.seq
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.2  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   4.2  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   7.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.6  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   9.6  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -2

Query: 439 FVNVDGILENLELKSHNNILQMICSLH 359
           ++ ++G L  +E K+ +  L  IC+LH
Sbjct: 832 YIILNGRLIKMETKAQSVALGKICTLH 858



 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 628 SHYRLQKTXNLCTNVT 675
           +++RL KT   CT VT
Sbjct: 396 TYFRLSKTKTFCTLVT 411


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 607 VHESHXFSHYRLQKTXNLCTNV 672
           V+ +H  S++RL K  + CT V
Sbjct: 26  VNFNHRESYFRLSKAKSFCTFV 47


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 6/16 (37%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
 Frame = -1

Query: 611 WTLMVWIGIVS-VYSC 567
           W  ++W+GI+S ++ C
Sbjct: 157 WLFILWVGILSTIFLC 172


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +2

Query: 554 YSCLCNCIQILCLSKPSTSTNLTSSHITAF 643
           + C  N IQ  CL     +T +   HI+ +
Sbjct: 375 FDCDINSIQYFCLMARCLNTLIFYYHISTY 404


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/30 (23%), Positives = 17/30 (56%)
 Frame = +1

Query: 448 LWYVDAASFIDVDDDQWTFFKFLRNIKRVK 537
           ++ +D  +F  +    W+FF  L+N+  ++
Sbjct: 315 IFSLDLDTFKKIMQKAWSFFTALKNMHDIR 344


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,542
Number of Sequences: 336
Number of extensions: 3550
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)