Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120611.seq
         (641 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    25   0.53 
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   4.9  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   6.5  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   6.5  
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    21   6.5  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   6.5  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   6.5  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   8.6  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   8.6  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   8.6  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   8.6  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = -1

Query: 206 CVQFLGGIVVVYLF*SGVEKVLQLPIIETLL 114
           CV FLG I++ ++F   +  ++ + I +TL+
Sbjct: 235 CVFFLGSILIFFIFPLAILIIVYILIAKTLM 265


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +1

Query: 430 KRIARLLGIKKIYHQDTSGSF 492
           +++A + G+KK+Y     G F
Sbjct: 262 EKVANIWGLKKVYAPVVDGEF 282


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 229 CLTRSEIQAWFREAINTLK 285
           CLT  +I+ WF+     LK
Sbjct: 44  CLTERQIKIWFQNRRMKLK 62


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 229 CLTRSEIQAWFREAINTLK 285
           CLT  +I+ WF+     LK
Sbjct: 261 CLTERQIKIWFQNRRMKLK 279


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
           protein.
          Length = 96

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 229 CLTRSEIQAWFREAINTLK 285
           CLT  +I+ WF+     LK
Sbjct: 43  CLTERQIKIWFQNRRMKLK 61


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 229 CLTRSEIQAWFREAINTLK 285
           CLT  +I+ WF+     LK
Sbjct: 195 CLTERQIKIWFQNRRMKLK 213


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 229 CLTRSEIQAWFREAINTLK 285
           CLT  +I+ WF+     LK
Sbjct: 254 CLTERQIKIWFQNRRMKLK 272


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -1

Query: 299 VFIVCLSVLMASLNQACISLRVK 231
           VF+VC  +LM S      S R K
Sbjct: 4   VFVVCCLLLMFSYTDNVSSTRTK 26


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +2

Query: 425 ITNELPGCWALKKYIIKIXAGRF 493
           I+ E+   W LKK    +  G F
Sbjct: 262 ISEEVANIWGLKKVYAPVVDGEF 284


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +2

Query: 425 ITNELPGCWALKKYIIKIXAGRF 493
           I+ E+   W LKK    +  G F
Sbjct: 260 ISEEVANIWGLKKVYAPVVDGEF 282


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +2

Query: 425 ITNELPGCWALKKYIIKIXAGRF 493
           I+ E+   W LKK    +  G F
Sbjct: 262 ISEEVANIWGLKKVYAPVVDGEF 284


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,003
Number of Sequences: 336
Number of extensions: 3248
Number of successful extensions: 27
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)