Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120611.seq
         (641 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001326-1|AAN71081.1|  687|Drosophila melanogaster AT17065p pro...    28   9.4  
AE014298-2800|AAF48917.3|  380|Drosophila melanogaster CG7440-PA...    28   9.4  
AE014297-1810|AAN13597.1|  861|Drosophila melanogaster CG31327-P...    28   9.4  

>BT001326-1|AAN71081.1|  687|Drosophila melanogaster AT17065p
           protein.
          Length = 687

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = -1

Query: 344 RSNDTMSNMCAQTSSVFIVCLSVLMASLNQACISLRVKQSEL 219
           RSN  + N+C +   +F+   ++    + Q  I+ R+ +SEL
Sbjct: 434 RSNQPILNICKKDGVIFVTLRALPTLGMKQRPITFRIVKSEL 475


>AE014298-2800|AAF48917.3|  380|Drosophila melanogaster CG7440-PA,
           isoform A protein.
          Length = 380

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +3

Query: 33  FNYMNDKQLITYDYSNY 83
           F+Y++ KQL  YDY NY
Sbjct: 331 FHYVHSKQLYVYDYFNY 347


>AE014297-1810|AAN13597.1|  861|Drosophila melanogaster CG31327-PA
           protein.
          Length = 861

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = -1

Query: 344 RSNDTMSNMCAQTSSVFIVCLSVLMASLNQACISLRVKQSEL 219
           RSN  + N+C +   +F+   ++    + Q  I+ R+ +SEL
Sbjct: 608 RSNQPILNICKKDGVIFVTLRALPTLGMKQRPITFRIVKSEL 649


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,980,368
Number of Sequences: 53049
Number of extensions: 604862
Number of successful extensions: 1512
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1509
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)