Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120607.seq
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   4.1  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   5.5  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   5.5  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.2  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.2  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   9.6  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -3

Query: 260  EHVLDLVGMLKRRFVL 213
            +H ++LV M+K RFV+
Sbjct: 1256 QHCVELVSMIKARFVV 1271


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/18 (44%), Positives = 12/18 (66%), Gaps = 1/18 (5%)
 Frame = +1

Query: 109 TCSVMSSQSDLWPR-TSP 159
           TCS++   + LWP+ T P
Sbjct: 81  TCSMLCGSTQLWPQPTGP 98


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 521 PNXRCHRQFLRQIVN 477
           PN R H +FLR  V+
Sbjct: 57  PNRRLHEEFLRSSVD 71


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 307 HSAHYQIWRDSTDNE 351
           H   Y IW D +DN+
Sbjct: 30  HQQIYGIWADDSDND 44


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 527 LPPNXRCHRQFLRQIVNFGNNII 459
           L P  R  ++ L+ + +F NN+I
Sbjct: 227 LTPQGRKEQKVLKSLHSFSNNVI 249


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 527 LPPNXRCHRQFLRQIVNFGNNII 459
           L P  R  ++ L+ + +F NN+I
Sbjct: 227 LTPQGRKEQKVLKSLHSFSNNVI 249


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = +1

Query: 109 TCSVMSSQSDLWPR 150
           TC+++ S+  +WP+
Sbjct: 67  TCNMLCSEPAIWPK 80


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,799
Number of Sequences: 336
Number of extensions: 3399
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)