Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120600.Seq
(728 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P32651 Cluster: Structural glycoprotein gp41; n=34; Nuc... 168 1e-40
UniRef50_Q06692 Cluster: UPF0213 protein in VLF1-GP41 intergenic... 130 3e-29
UniRef50_A0EYW6 Cluster: Gp41; n=1; Ecotropis obliqua NPV|Rep: G... 77 3e-13
UniRef50_Q06VJ4 Cluster: Putative uncharacterized protein; n=1; ... 71 2e-11
UniRef50_Q80LJ7 Cluster: Putative uncharacterized protein; n=1; ... 66 1e-09
UniRef50_Q8JMD7 Cluster: Putative uncharacterized protein; n=2; ... 59 1e-07
UniRef50_Q0E564 Cluster: 13 kDa GIY-YIG-like endonuclease; n=1; ... 56 9e-07
UniRef50_Q1JZM0 Cluster: Excinuclease ABC, C subunit-like; n=2; ... 55 2e-06
UniRef50_Q6D994 Cluster: UPF0213 protein ECA0725; n=6; Enterobac... 54 3e-06
UniRef50_A4CD43 Cluster: Putative uncharacterized protein; n=1; ... 53 6e-06
UniRef50_Q91FT0 Cluster: 242L; n=1; Invertebrate iridescent viru... 52 2e-05
UniRef50_Q2SQ04 Cluster: Predicted endonuclease containing a URI... 49 1e-04
UniRef50_Q725W6 Cluster: UPF0213 protein DVU_3309; n=2; Desulfov... 49 1e-04
UniRef50_Q9PYW8 Cluster: ORF75; n=1; Xestia c-nigrum granuloviru... 49 1e-04
UniRef50_Q9KLK4 Cluster: UPF0213 protein VC_A0739; n=29; Gammapr... 49 1e-04
UniRef50_A0YDW5 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_Q1PZH5 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_Q0F3H4 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_P67349 Cluster: UPF0213 protein yhbQ; n=22; Enterobacte... 48 2e-04
UniRef50_Q6AJN1 Cluster: UPF0213 protein DP2720; n=3; cellular o... 48 3e-04
UniRef50_A7HV75 Cluster: Excinuclease ABC C subunit domain prote... 47 4e-04
UniRef50_A6F7V2 Cluster: Excinuclease ABC, C subunit, N-terminal... 47 4e-04
UniRef50_A0EYZ1 Cluster: Endonuclease; n=1; Ecotropis obliqua NP... 47 5e-04
UniRef50_A4LZS0 Cluster: Excinuclease ABC, C subunit domain prot... 47 5e-04
UniRef50_Q6LJI0 Cluster: Putative uncharacterized protein C3908;... 46 7e-04
UniRef50_A3Y6M7 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_UPI0000E87E36 Cluster: hypothetical protein MB2181_0086... 46 0.001
UniRef50_A6VVA2 Cluster: Excinuclease ABC C subunit domain prote... 46 0.001
UniRef50_A1S1V1 Cluster: Endonuclease containing a URI domain; n... 46 0.001
UniRef50_Q87GU3 Cluster: UPF0213 protein VPA1222; n=11; Vibriona... 46 0.001
UniRef50_Q0I0G8 Cluster: Excinuclease ABC, C subunit domain prot... 45 0.002
UniRef50_Q0HNZ9 Cluster: Excinuclease ABC, C subunit domain prot... 45 0.002
UniRef50_Q9HXF2 Cluster: UPF0213 protein PA3854; n=15; Pseudomon... 45 0.002
UniRef50_A0KPI3 Cluster: Endo/excinuclease domain protein; n=2; ... 44 0.003
UniRef50_Q9KGL3 Cluster: UPF0213 protein BH0048; n=11; Bacteria|... 44 0.003
UniRef50_A6BH73 Cluster: Putative uncharacterized protein; n=1; ... 44 0.004
UniRef50_A1FNL2 Cluster: Excinuclease ABC, C subunit-like; n=4; ... 44 0.004
UniRef50_Q6QXL5 Cluster: ORF95; n=9; Granulovirus|Rep: ORF95 - A... 44 0.005
UniRef50_Q91EZ0 Cluster: ORF65 similar to AcMNPV ORF79; n=1; Cyd... 43 0.007
UniRef50_Q3IE32 Cluster: Putative uncharacterized protein; n=2; ... 43 0.007
UniRef50_Q089V4 Cluster: Excinuclease ABC, C subunit domain prot... 43 0.007
UniRef50_A4J4G2 Cluster: Excinuclease ABC, C subunit domain prot... 43 0.007
UniRef50_Q6JKB3 Cluster: Glycoprotein 41; n=3; Nucleopolyhedrovi... 43 0.009
UniRef50_Q21GK3 Cluster: Excinuclease ABC, C subunit-like protei... 43 0.009
UniRef50_Q1LH87 Cluster: Excinuclease ABC, C subunit-like protei... 42 0.012
UniRef50_Q2ILJ9 Cluster: Excinuclease ABC, C subunit-like; n=2; ... 42 0.015
UniRef50_Q2C4T8 Cluster: Putative uncharacterized protein; n=2; ... 42 0.015
UniRef50_A4B511 Cluster: Hypothetical URI domain endonuclease; n... 42 0.015
UniRef50_Q5QZJ7 Cluster: Predicted endonuclease containing a URI... 41 0.027
UniRef50_Q8E0F5 Cluster: UPF0213 protein SAG0778; n=8; Streptoco... 41 0.027
UniRef50_Q1QV31 Cluster: Excinuclease ABC, C subunit-like protei... 41 0.036
UniRef50_Q06693 Cluster: Uncharacterized 12.5 kDa protein in VLF... 40 0.047
UniRef50_Q3CK93 Cluster: Excinuclease ABC, C subunit, N-terminal... 40 0.062
UniRef50_UPI0000E0E642 Cluster: hypothetical protein OM2255_2012... 40 0.082
UniRef50_A6GJZ6 Cluster: Excinuclease ABC, C subunit-like protei... 39 0.11
UniRef50_A5FNC4 Cluster: Excinuclease ABC, C subunit domain prot... 39 0.11
UniRef50_Q9RHE8 Cluster: Putative uncharacterized protein; n=1; ... 38 0.19
UniRef50_Q97PR7 Cluster: UPF0213 protein SP_1535; n=73; Bacilli|... 38 0.19
UniRef50_Q0IKZ8 Cluster: ORF121; n=1; Leucania separata nuclear ... 38 0.25
UniRef50_A6T193 Cluster: Uncharacterized conserved protein; n=1;... 38 0.25
UniRef50_A0NJ82 Cluster: Methyltransferase; n=2; Oenococcus oeni... 38 0.25
UniRef50_Q8P698 Cluster: UPF0213 protein XCC3072; n=7; Proteobac... 38 0.25
UniRef50_Q4L3E5 Cluster: UPF0213 protein SH2523; n=25; cellular ... 38 0.25
UniRef50_Q7NMN4 Cluster: Gll0731 protein; n=1; Gloeobacter viola... 38 0.33
UniRef50_Q2G9Y5 Cluster: Excinuclease ABC, C subunit-like protei... 38 0.33
UniRef50_Q88VJ1 Cluster: UPF0213 protein lp_2058; n=6; Lactobaci... 38 0.33
UniRef50_Q193D5 Cluster: Excinuclease ABC, C subunit-like; n=2; ... 37 0.44
UniRef50_Q07QY7 Cluster: Excinuclease ABC, C subunit domain prot... 37 0.44
UniRef50_A4B9D9 Cluster: Excinuclease ABC, C subunit-like protei... 37 0.44
UniRef50_Q15PT6 Cluster: Excinuclease ABC, C subunit-like; n=1; ... 37 0.58
UniRef50_A7NLC7 Cluster: Excinuclease ABC C subunit domain prote... 37 0.58
UniRef50_Q5UPY6 Cluster: Uncharacterized protein L300; n=1; Acan... 37 0.58
UniRef50_Q4UJM5 Cluster: Endo/excinuclease amino terminal domain... 36 0.77
UniRef50_Q2S0D1 Cluster: GIY-YIG catalytic domain, putative; n=3... 36 0.77
UniRef50_Q1PYT5 Cluster: Predicted orf; n=1; Candidatus Kuenenia... 36 0.77
UniRef50_A3WNM7 Cluster: Predicted endonuclease containing a URI... 36 0.77
UniRef50_Q84LK0 Cluster: DNA mismatch repair protein; n=7; core ... 36 0.77
UniRef50_Q30TF2 Cluster: Excinuclease ABC, C subunit-like; n=2; ... 36 1.0
UniRef50_Q0LV83 Cluster: Excinuclease ABC, C subunit-like; n=1; ... 36 1.3
UniRef50_Q81W06 Cluster: UPF0213 protein BA_0032/GBAA0032/BAS003... 36 1.3
UniRef50_Q51440 Cluster: UPF0213 protein in ldhD 5'region; n=3; ... 35 1.8
UniRef50_UPI00003839BD Cluster: COG2827: Predicted endonuclease ... 35 2.3
UniRef50_Q62LB3 Cluster: Endo/excinuclease domain protein; n=20;... 35 2.3
UniRef50_Q2G9S1 Cluster: Excinuclease ABC, C subunit-like protei... 35 2.3
UniRef50_A5VFF5 Cluster: Excinuclease ABC, C subunit domain prot... 34 3.1
UniRef50_A5FFT3 Cluster: Excinuclease ABC, C subunit domain prot... 34 3.1
UniRef50_A1RI21 Cluster: Excinuclease ABC, C subunit domain prot... 34 3.1
UniRef50_Q8RIL3 Cluster: UPF0213 protein FN1575; n=3; Fusobacter... 34 3.1
UniRef50_Q5WYF4 Cluster: Putative uncharacterized protein; n=3; ... 34 4.1
UniRef50_Q39DX9 Cluster: Excinuclease ABC, C subunit-like; n=9; ... 34 4.1
UniRef50_A5VJC3 Cluster: Excinuclease ABC, C subunit domain prot... 34 4.1
UniRef50_A4JGU7 Cluster: Excinuclease ABC, C subunit domain prot... 34 4.1
UniRef50_A3J1S6 Cluster: Predicted endonuclease containing a URI... 34 4.1
UniRef50_A0W851 Cluster: Excinuclease ABC, C subunit-like; n=2; ... 34 4.1
UniRef50_P95364 Cluster: UPF0213 protein in glnA 3'region; n=5; ... 34 4.1
UniRef50_Q0LU34 Cluster: Excinuclease ABC, C subunit-like; n=4; ... 33 5.4
UniRef50_A4G800 Cluster: Putative uncharacterized protein; n=3; ... 33 5.4
UniRef50_A1G1C7 Cluster: Excinuclease ABC, C subunit-like; n=2; ... 33 5.4
UniRef50_Q9FHS4 Cluster: Emb|CAB76036.1; n=1; Arabidopsis thalia... 33 5.4
UniRef50_O31414 Cluster: UPF0213 protein yazA; n=4; Bacillus|Rep... 33 5.4
UniRef50_Q4AQ38 Cluster: Excinuclease ABC, C subunit, N-terminal... 33 7.2
UniRef50_Q1QAA0 Cluster: Putative uncharacterized protein; n=1; ... 33 7.2
UniRef50_Q0UAL6 Cluster: Putative uncharacterized protein; n=1; ... 33 7.2
UniRef50_Q186F2 Cluster: Putative endonuclease; n=1; Clostridium... 33 9.5
UniRef50_Q9CEL6 Cluster: UPF0213 protein ysiG; n=3; Lactococcus ... 33 9.5
>UniRef50_P32651 Cluster: Structural glycoprotein gp41; n=34;
Nucleopolyhedrovirus|Rep: Structural glycoprotein gp41 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 409
Score = 168 bits (409), Expect = 1e-40
Identities = 81/84 (96%), Positives = 84/84 (100%)
Frame = +3
Query: 3 KENVAFLAPLSASANIFNYMAELATRAGKQPSMFQNATFLTSAANAVNSPAAHLTKNACK 182
KENVAFLAPLSASANIFNYMAELATRAGKQPSMFQNATFLTSAANAVNSPAAHLTK+AC+
Sbjct: 302 KENVAFLAPLSASANIFNYMAELATRAGKQPSMFQNATFLTSAANAVNSPAAHLTKSACQ 361
Query: 183 DSLTELAFQNETLRRFIFQQINYN 254
+SLTELAFQNETLRRFIFQQINYN
Sbjct: 362 ESLTELAFQNETLRRFIFQQINYN 385
>UniRef50_Q06692 Cluster: UPF0213 protein in VLF1-GP41 intergenic
region; n=12; Nucleopolyhedrovirus|Rep: UPF0213 protein
in VLF1-GP41 intergenic region - Autographa californica
nuclear polyhedrosis virus (AcMNPV)
Length = 104
Score = 130 bits (315), Expect = 3e-29
Identities = 59/59 (100%), Positives = 59/59 (100%)
Frame = +1
Query: 331 MATTLYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHS 507
MATTLYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHS
Sbjct: 1 MATTLYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHS 59
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = +2
Query: 503 TAEAYDYKTAARMEYNLKRKCSKYFKLRLI 592
+A AYDY TAARMEYNLKRKCSKYFKLRLI
Sbjct: 59 SASAYDYNTAARMEYNLKRKCSKYFKLRLI 88
>UniRef50_A0EYW6 Cluster: Gp41; n=1; Ecotropis obliqua NPV|Rep: Gp41
- Ecotropis obliqua NPV
Length = 338
Score = 77.4 bits (182), Expect = 3e-13
Identities = 40/92 (43%), Positives = 59/92 (64%), Gaps = 9/92 (9%)
Frame = +3
Query: 3 KENVAFLAPLSASANIFNYMAELATRAGKQPSMFQNATFLTSAA---------NAVNSPA 155
KEN+ +L LS + NIF ++AE+ATR GKQP +F++A +T+++ + + A
Sbjct: 238 KENLTYLGALSETTNIFEFIAEMATRRGKQPGLFRDAYSITNSSTPPQRKSQPKSASVNA 297
Query: 156 AHLTKNACKDSLTELAFQNETLRRFIFQQINY 251
+ SLTE+AFQNE LRRFIFQQ++Y
Sbjct: 298 EETLHEQYRRSLTEMAFQNEALRRFIFQQLSY 329
>UniRef50_Q06VJ4 Cluster: Putative uncharacterized protein; n=1;
Trichoplusia ni ascovirus 2c|Rep: Putative
uncharacterized protein - Trichoplusia ni ascovirus 2c
Length = 135
Score = 71.3 bits (167), Expect = 2e-11
Identities = 29/56 (51%), Positives = 41/56 (73%)
Frame = +1
Query: 340 TLYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHS 507
++YT +WC+Y++R G +YTGITSN+++R KQH + GAKCLR+ T L VY S
Sbjct: 9 SVYTKNIWCLYMIRMPCGSIYTGITSNVDKRFKQHCDGTGAKCLRSKTPLVKVYSS 64
Score = 34.3 bits (75), Expect = 3.1
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +2
Query: 515 YDYKTAARMEYNLKRKCSKYFKLRLI 592
YD+KT AR+EY +K + +K FK +LI
Sbjct: 68 YDHKTVARIEYEIKHRRNKSFKEKLI 93
>UniRef50_Q80LJ7 Cluster: Putative uncharacterized protein; n=1;
Adoxophyes honmai NPV|Rep: Putative uncharacterized
protein - Adoxophyes honmai nucleopolyhedrovirus
Length = 96
Score = 65.7 bits (153), Expect = 1e-09
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +1
Query: 343 LYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVY 501
++ + WCVYI+R NG+LYTG+++ + R + H N +GAKCLR T L LVY
Sbjct: 1 MFKSNSWCVYIIRMPNGRLYTGMSNRVLNRFRDHCNGRGAKCLRGKTPLALVY 53
>UniRef50_Q8JMD7 Cluster: Putative uncharacterized protein; n=2;
Nucleopolyhedrovirus|Rep: Putative uncharacterized
protein - Mamestra configurata NPV-B
Length = 98
Score = 59.3 bits (137), Expect = 1e-07
Identities = 25/49 (51%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = +1
Query: 358 VWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATN-LRLVY 501
+WC+Y++R LYTGIT N++RR QH+ +GAKCLR + N L+L Y
Sbjct: 1 MWCLYLIRAKGDMLYTGITKNISRRFYQHNKGRGAKCLRASKNALQLAY 49
>UniRef50_Q0E564 Cluster: 13 kDa GIY-YIG-like endonuclease; n=1;
Spodoptera frugiperda ascovirus 1a|Rep: 13 kDa
GIY-YIG-like endonuclease - Spodoptera frugiperda
ascovirus 1a
Length = 112
Score = 56.0 bits (129), Expect = 9e-07
Identities = 22/49 (44%), Positives = 34/49 (69%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHS 507
W +Y+++ NG +YTG + ++ RR K H + +GAKCLR A LRL++ S
Sbjct: 7 WKLYMIQMVNGNIYTGASKDVERRFKMHCSGRGAKCLRGAQGLRLIWTS 55
>UniRef50_Q1JZM0 Cluster: Excinuclease ABC, C subunit-like; n=2;
Bacteria|Rep: Excinuclease ABC, C subunit-like -
Desulfuromonas acetoxidans DSM 684
Length = 86
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSGG 513
W VYI+R + LYTGIT++L RR QH++ +GA+ R + +VYH G
Sbjct: 6 WLVYIIRCRDNSLYTGITTDLERRFAQHASGRGARYFRGHEPIEVVYHESG 56
>UniRef50_Q6D994 Cluster: UPF0213 protein ECA0725; n=6;
Enterobacteriaceae|Rep: UPF0213 protein ECA0725 -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 103
Score = 54.4 bits (125), Expect = 3e-06
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYH 504
W +Y+LR G LYTGIT++++RR+ QH +GAK LR L LV+H
Sbjct: 10 WYLYMLRTVAGALYTGITTDVSRRMNQHQAGKGAKALRGKGELTLVFH 57
>UniRef50_A4CD43 Cluster: Putative uncharacterized protein; n=1;
Pseudoalteromonas tunicata D2|Rep: Putative
uncharacterized protein - Pseudoalteromonas tunicata D2
Length = 105
Score = 53.2 bits (122), Expect = 6e-06
Identities = 22/48 (45%), Positives = 33/48 (68%)
Frame = +1
Query: 358 VWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVY 501
+W +Y++ G YTGIT+++ RR KQH + +GAK LR T L+LV+
Sbjct: 3 IWFIYLIETPIGHWYTGITTDVERRFKQHQSGKGAKNLRGKTPLKLVF 50
>UniRef50_Q91FT0 Cluster: 242L; n=1; Invertebrate iridescent virus
6|Rep: 242L - Chilo iridescent virus (CIV) (Insect
iridescent virus type 6)
Length = 99
Score = 51.6 bits (118), Expect = 2e-05
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHS 507
W +Y++ NG +YTGI++N+ +R H N +GAKCLR L+L + S
Sbjct: 7 WNIYMVTMKNGNIYTGISNNVLKRFDTHCNGKGAKCLRGKGPLKLSWFS 55
>UniRef50_Q2SQ04 Cluster: Predicted endonuclease containing a URI
domain; n=1; Hahella chejuensis KCTC 2396|Rep: Predicted
endonuclease containing a URI domain - Hahella
chejuensis (strain KCTC 2396)
Length = 105
Score = 49.2 bits (112), Expect = 1e-04
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSGG 513
WCVY+L + LYTGIT+N +R + H GAK R +RL+Y G
Sbjct: 11 WCVYMLLVSDNSLYTGITNNPAKRFRDHLQGSGAKYFRGRKPVRLLYAEVG 61
>UniRef50_Q725W6 Cluster: UPF0213 protein DVU_3309; n=2;
Desulfovibrio vulgaris subsp. vulgaris|Rep: UPF0213
protein DVU_3309 - Desulfovibrio vulgaris (strain
Hildenborough / ATCC 29579 / NCIMB8303)
Length = 110
Score = 49.2 bits (112), Expect = 1e-04
Identities = 21/52 (40%), Positives = 33/52 (63%)
Frame = +1
Query: 352 NKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHS 507
++VW VY+LR +G LY G+T+N+ RR+ QH +GA+ R L+ H+
Sbjct: 7 DEVWFVYLLRCADGTLYCGVTNNIERRLTQHHRGRGARYTRGRAPFILLGHA 58
>UniRef50_Q9PYW8 Cluster: ORF75; n=1; Xestia c-nigrum
granulovirus|Rep: ORF75 - Xestia c-nigrum granulosis
virus (XnGV) (Xestia c-nigrumgranulovirus)
Length = 97
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/53 (39%), Positives = 37/53 (69%)
Frame = +1
Query: 349 TNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHS 507
++K W +Y+++ + LYTG++ +++RR + H + +GAK LRN L+LVY S
Sbjct: 4 SDKSWELYMVQTPHQMLYTGVSVDVDRRFRLHCSGRGAKFLRNKQPLQLVYRS 56
>UniRef50_Q9KLK4 Cluster: UPF0213 protein VC_A0739; n=29;
Gammaproteobacteria|Rep: UPF0213 protein VC_A0739 -
Vibrio cholerae
Length = 101
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVY 501
W VY++R N LY GIT++++RR QH +GAK LR L LV+
Sbjct: 11 WFVYLVRCANNALYCGITTDVSRRFAQHQKGRGAKALRGKGPLELVW 57
>UniRef50_A0YDW5 Cluster: Putative uncharacterized protein; n=1;
marine gamma proteobacterium HTCC2143|Rep: Putative
uncharacterized protein - marine gamma proteobacterium
HTCC2143
Length = 88
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Frame = +1
Query: 355 KVWCVYILRQDNGKLYTGITSNLNRRIKQH---SNKQGAKCLRNATNLRLVY 501
K W +YI+ ++GKLYTGIT++++RR +H +N +GAK R+ +VY
Sbjct: 5 KTWWLYIVETESGKLYTGITTDVDRRFHEHFDKNNSRGAKFFRSDPAKAVVY 56
>UniRef50_Q1PZH5 Cluster: Putative uncharacterized protein; n=1;
Candidatus Kuenenia stuttgartiensis|Rep: Putative
uncharacterized protein - Candidatus Kuenenia
stuttgartiensis
Length = 102
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/48 (45%), Positives = 34/48 (70%), Gaps = 2/48 (4%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQHS--NKQGAKCLRNATNLRLV 498
W +Y++R +G+LYTGIT+++ RR +HS +K+G+K LR L LV
Sbjct: 17 WFLYLIRCKHGRLYTGITTDVERRFAEHSSDDKKGSKYLRGKAPLTLV 64
>UniRef50_Q0F3H4 Cluster: Putative uncharacterized protein; n=1;
Mariprofundus ferrooxydans PV-1|Rep: Putative
uncharacterized protein - Mariprofundus ferrooxydans
PV-1
Length = 97
Score = 48.0 bits (109), Expect = 2e-04
Identities = 20/47 (42%), Positives = 32/47 (68%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVY 501
W +Y++R G+LYTGIT+++ RR+ +H + +GAK LR L L +
Sbjct: 12 WSLYMIRCKGGQLYTGITTHVERRLAEHQSGKGAKFLRGKGPLVLAF 58
>UniRef50_P67349 Cluster: UPF0213 protein yhbQ; n=22;
Enterobacteriaceae|Rep: UPF0213 protein yhbQ -
Salmonella typhimurium
Length = 100
Score = 48.0 bits (109), Expect = 2e-04
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVY 501
W +Y++R + LYTGIT+++ RR +QH +GAK LR L L +
Sbjct: 4 WYLYLIRTADNALYTGITTDVARRYRQHQTGKGAKALRGKGELTLAF 50
>UniRef50_Q6AJN1 Cluster: UPF0213 protein DP2720; n=3; cellular
organisms|Rep: UPF0213 protein DP2720 - Desulfotalea
psychrophila
Length = 110
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQH-SNKQGAKCLRNATNLRLVY 501
W VYI++ +G LYTGIT+N+ RRI +H S+ +GA+ R+ + LVY
Sbjct: 14 WFVYIVQCADGTLYTGITTNIARRITEHNSSAKGARYTRSRRPVMLVY 61
>UniRef50_A7HV75 Cluster: Excinuclease ABC C subunit domain protein;
n=1; Parvibaculum lavamentivorans DS-1|Rep: Excinuclease
ABC C subunit domain protein - Parvibaculum
lavamentivorans DS-1
Length = 96
Score = 47.2 bits (107), Expect = 4e-04
Identities = 24/54 (44%), Positives = 32/54 (59%)
Frame = +1
Query: 355 KVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSGGV 516
K W VYIL G+LYTGIT ++ R K H++ +GAK R+ RLV+ V
Sbjct: 7 KPWYVYILECTGGRLYTGITVDVPMRYKAHASGKGAKFTRSYRPERLVFQQAFV 60
>UniRef50_A6F7V2 Cluster: Excinuclease ABC, C subunit, N-terminal;
n=1; Moritella sp. PE36|Rep: Excinuclease ABC, C
subunit, N-terminal - Moritella sp. PE36
Length = 87
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +1
Query: 358 VWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVY 501
+W VY++ D G LY GIT+++ RR +QH GAK R A +R+ Y
Sbjct: 6 LWIVYLIETDAG-LYCGITTDMERRYQQHCKGTGAKFFRRAKPIRIAY 52
>UniRef50_A0EYZ1 Cluster: Endonuclease; n=1; Ecotropis obliqua
NPV|Rep: Endonuclease - Ecotropis obliqua NPV
Length = 109
Score = 46.8 bits (106), Expect = 5e-04
Identities = 19/53 (35%), Positives = 35/53 (66%)
Frame = +1
Query: 349 TNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHS 507
+ +++ +Y++ ++G+LY GI S++ +R +QH G+K LRN + LVY S
Sbjct: 3 SQRLYALYLIETEHGQLYAGIASDVKKRFRQHYRSAGSKFLRN-KQINLVYFS 54
>UniRef50_A4LZS0 Cluster: Excinuclease ABC, C subunit domain
protein; n=4; Proteobacteria|Rep: Excinuclease ABC, C
subunit domain protein - Geobacter bemidjiensis Bem
Length = 93
Score = 46.8 bits (106), Expect = 5e-04
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSGG 513
W VYI+ +G YTGIT+++ RR++QH+ GAK R +++ GG
Sbjct: 3 WQVYIILCSDGTFYTGITTDIARRLRQHATGSGAKYFRGRRPEEVLFLEGG 53
>UniRef50_Q6LJI0 Cluster: Putative uncharacterized protein C3908;
n=2; Photobacterium profundum|Rep: Putative
uncharacterized protein C3908 - Photobacterium profundum
(Photobacterium sp. (strain SS9))
Length = 116
Score = 46.4 bits (105), Expect = 7e-04
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +1
Query: 358 VWCVYILRQDNGKLYTGITSNLNRRIKQH-SNKQGAKCLRNATNLRLVYH 504
+W VY++R + LY G+T+++ RR +H S K+GAK L+ L L +H
Sbjct: 28 IWSVYLIRTVSNTLYCGVTTDVQRRYSEHQSGKKGAKYLKGKGPLTLAWH 77
>UniRef50_A3Y6M7 Cluster: Putative uncharacterized protein; n=1;
Marinomonas sp. MED121|Rep: Putative uncharacterized
protein - Marinomonas sp. MED121
Length = 120
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/51 (39%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Frame = +1
Query: 358 VWCVYILRQDNGKLYTGITSNLNRRIKQH--SNKQGAKCLRNATNLRLVYH 504
VW VY++R LY G+T++++RR ++H ++K+GA+ LR L L++H
Sbjct: 27 VWSVYLIRTRLNTLYAGVTTDVDRRFQEHASNSKKGARYLRGKGPLALMWH 77
>UniRef50_UPI0000E87E36 Cluster: hypothetical protein MB2181_00865;
n=1; Methylophilales bacterium HTCC2181|Rep:
hypothetical protein MB2181_00865 - Methylophilales
bacterium HTCC2181
Length = 102
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVY 501
W VYIL+ + LYTGIT+N+++RI+ H GAK + + +L++
Sbjct: 25 WFVYILKCSDDTLYTGITNNVSKRIEDHEKGVGAKYTKGRSPFQLLF 71
>UniRef50_A6VVA2 Cluster: Excinuclease ABC C subunit domain protein;
n=1; Marinomonas sp. MWYL1|Rep: Excinuclease ABC C
subunit domain protein - Marinomonas sp. MWYL1
Length = 112
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/50 (40%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQHS--NKQGAKCLRNATNLRLVYH 504
W +Y+++ LYTGI+++++RR K+HS +K+GA+ L+ L LV+H
Sbjct: 16 WSLYMIKTRLNTLYTGISTDVDRRFKEHSGVSKRGARYLKGKGPLELVWH 65
>UniRef50_A1S1V1 Cluster: Endonuclease containing a URI domain; n=1;
Shewanella amazonensis SB2B|Rep: Endonuclease containing
a URI domain - Shewanella amazonensis (strain ATCC
BAA-1098 / SB2B)
Length = 106
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Frame = +1
Query: 358 VWCVYILRQDNGKLYTGITSNLNRRIKQH--SNKQGAKCLRNATNLRLVY 501
+W +YI+R G+LYTG+T+N+ RR +H + AK LR L LVY
Sbjct: 4 IWQLYIIRCATGELYTGVTTNVARRFDEHQCGGARAAKYLRGRGPLTLVY 53
>UniRef50_Q87GU3 Cluster: UPF0213 protein VPA1222; n=11;
Vibrionales|Rep: UPF0213 protein VPA1222 - Vibrio
parahaemolyticus
Length = 106
Score = 45.6 bits (103), Expect = 0.001
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLR 474
W VY++R + LY G+T+++ RR KQH +GAK L+
Sbjct: 9 WSVYLIRNNRNALYCGVTNDIERRFKQHQLGKGAKALK 46
>UniRef50_Q0I0G8 Cluster: Excinuclease ABC, C subunit domain
protein; n=12; Shewanella|Rep: Excinuclease ABC, C
subunit domain protein - Shewanella sp. (strain MR-7)
Length = 141
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQH--SNKQGAKCLRNATNLRLVY 501
W +Y++R NG LYTGIT+++ RR +H S+ + AK LR L L+Y
Sbjct: 57 WYLYLIRCANGHLYTGITTDVARRFNEHQSSSPKAAKYLRGKGPLTLMY 105
>UniRef50_Q0HNZ9 Cluster: Excinuclease ABC, C subunit domain
protein; n=3; Shewanella|Rep: Excinuclease ABC, C
subunit domain protein - Shewanella sp. (strain MR-4)
Length = 139
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQH--SNKQGAKCLRNATNLRLVY 501
W +Y++R NG LYTGIT+++ RR +H S+ + AK LR L L+Y
Sbjct: 57 WYLYLIRCANGHLYTGITTDVARRFNEHQSSSPKAAKYLRGKGPLTLMY 105
>UniRef50_Q9HXF2 Cluster: UPF0213 protein PA3854; n=15;
Pseudomonas|Rep: UPF0213 protein PA3854 - Pseudomonas
aeruginosa
Length = 104
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/56 (37%), Positives = 31/56 (55%)
Frame = +1
Query: 334 ATTLYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVY 501
A T K W VY++R +NG LY GI+ + RR H + +GA+ ++ LVY
Sbjct: 6 AATAAIGKCWSVYLVRAENGALYCGISDDPLRRFDTHCSGKGARFFHSSPARALVY 61
>UniRef50_A0KPI3 Cluster: Endo/excinuclease domain protein; n=2;
Aeromonas|Rep: Endo/excinuclease domain protein -
Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966
/ NCIB 9240)
Length = 136
Score = 44.4 bits (100), Expect = 0.003
Identities = 18/47 (38%), Positives = 32/47 (68%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVY 501
W +Y++R +G LYTGI+++ RR++QH + +G++ LR L L +
Sbjct: 19 WFIYMVRTASGLLYTGISTDPLRRLRQHQSGKGSRALRGKGPLTLAW 65
>UniRef50_Q9KGL3 Cluster: UPF0213 protein BH0048; n=11;
Bacteria|Rep: UPF0213 protein BH0048 - Bacillus
halodurans
Length = 94
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = +1
Query: 367 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLV 498
VYIL +G YTG T++++RRIK+H++ +GAK R RLV
Sbjct: 5 VYILECKDGSWYTGYTTDVDRRIKKHASGKGAKYTRGRGPFRLV 48
>UniRef50_A6BH73 Cluster: Putative uncharacterized protein; n=1;
Dorea longicatena DSM 13814|Rep: Putative
uncharacterized protein - Dorea longicatena DSM 13814
Length = 114
Score = 44.0 bits (99), Expect = 0.004
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +1
Query: 370 YILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYH 504
YI++ + LYTG T++LN+RIK H++ +GAK + ++LVY+
Sbjct: 5 YIVKCADSTLYTGWTNDLNKRIKAHNSGKGAKYTKTRRPVKLVYY 49
>UniRef50_A1FNL2 Cluster: Excinuclease ABC, C subunit-like; n=4;
Pseudomonadaceae|Rep: Excinuclease ABC, C subunit-like -
Pseudomonas putida W619
Length = 94
Score = 44.0 bits (99), Expect = 0.004
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +1
Query: 355 KVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVY 501
K W VY++R NG LY GI+ + RR H QGA+ + + LVY
Sbjct: 11 KPWYVYLVRAANGSLYCGISDDPQRRFVAHQKGQGARYFKTSPAQALVY 59
>UniRef50_Q6QXL5 Cluster: ORF95; n=9; Granulovirus|Rep: ORF95 -
Agrotis segetum granulosis virus (AsGV) (Agrotis
segetumgranulovirus)
Length = 309
Score = 43.6 bits (98), Expect = 0.005
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Frame = +3
Query: 3 KENVAFL--APLSASANIFNYMAELATRAGKQPSMFQNATFLTSAANAVNSPAAHLTKNA 176
++N+A+L APL+ S N++ + + A AG + + S AH T
Sbjct: 227 RDNIAYLVNAPLTLSTNVYMLIEKAAINAGHHAAD-------EKMYEEIVSNTAHRT-TP 278
Query: 177 CKDSLTELAFQNETLRRFIFQQIN 248
++SLTELAF+NE LRR + Q +N
Sbjct: 279 IQESLTELAFENEALRRGLIQDLN 302
>UniRef50_Q91EZ0 Cluster: ORF65 similar to AcMNPV ORF79; n=1; Cydia
pomonella granulovirus|Rep: ORF65 similar to AcMNPV
ORF79 - Cydia pomonella granulosis virus (CpGV) (Cydia
pomonellagranulovirus)
Length = 79
Score = 43.2 bits (97), Expect = 0.007
Identities = 16/35 (45%), Positives = 26/35 (74%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAK 465
WCVY++R +G LYTG+++N++RR H +GA+
Sbjct: 7 WCVYMVRTPDGALYTGMSNNVHRRFVTHCIGRGAR 41
>UniRef50_Q3IE32 Cluster: Putative uncharacterized protein; n=2;
Alteromonadales|Rep: Putative uncharacterized protein -
Pseudoalteromonas haloplanktis (strain TAC 125)
Length = 104
Score = 43.2 bits (97), Expect = 0.007
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +1
Query: 358 VWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVY-HSGG 513
+W +YI++ G YTGIT+N+ +R+ H GAK L+ L L++ HS G
Sbjct: 22 IWYLYIVQTRYGHWYTGITTNVEQRLATHQAGNGAKNLKGKGPLLLIHQHSVG 74
>UniRef50_Q089V4 Cluster: Excinuclease ABC, C subunit domain
protein; n=2; Shewanella|Rep: Excinuclease ABC, C
subunit domain protein - Shewanella frigidimarina
(strain NCIMB 400)
Length = 107
Score = 43.2 bits (97), Expect = 0.007
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQH--SNKQGAKCLRNATNLRLVY 501
W +YI+R N LYTGIT+++ RR +H S + AK L+ L LVY
Sbjct: 19 WYLYIIRCANSHLYTGITTDIARRFAEHQASGPKAAKYLKGKGPLTLVY 67
>UniRef50_A4J4G2 Cluster: Excinuclease ABC, C subunit domain
protein; n=3; Clostridiales|Rep: Excinuclease ABC, C
subunit domain protein - Desulfotomaculum reducens MI-1
Length = 88
Score = 43.2 bits (97), Expect = 0.007
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSG 510
+ VYIL+ + LYTGIT++L RR++QH + +K R ++LVY G
Sbjct: 5 YVVYILKCSDSTLYTGITNDLKRRLQQHLLGKASKYTRCRLPVQLVYIEG 54
>UniRef50_Q6JKB3 Cluster: Glycoprotein 41; n=3;
Nucleopolyhedrovirus|Rep: Glycoprotein 41 - Neodiprion
sertifer NPV
Length = 312
Score = 42.7 bits (96), Expect = 0.009
Identities = 32/81 (39%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +3
Query: 3 KENVAFLAPLSAS--ANIFNYMAELATRAGKQPSMFQNATFLTSAANAVNSPAAHLTKNA 176
KENV + PL A IF + A+LAT AGK+ S F F + +LT++
Sbjct: 237 KENVNYFVPLGAKHRMTIFEWAAQLATSAGKKRSPFVLPDFKKN---------TNLTQSQ 287
Query: 177 CKDSLTELAFQNETLRRFIFQ 239
C L+E A NE LRR I Q
Sbjct: 288 CNSLLSESAQYNEILRRKIEQ 308
>UniRef50_Q21GK3 Cluster: Excinuclease ABC, C subunit-like protein;
n=1; Saccharophagus degradans 2-40|Rep: Excinuclease
ABC, C subunit-like protein - Saccharophagus degradans
(strain 2-40 / ATCC 43961 / DSM 17024)
Length = 106
Score = 42.7 bits (96), Expect = 0.009
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQHSN-KQGAKCLRNATNLRLVY 501
W VYIL+ +G YTG+T ++ RR+ +H++ K GAK R +++VY
Sbjct: 12 WQVYILQCADGSYYTGVTVDIARRVHEHNHAKLGAKYTRARRPVKVVY 59
>UniRef50_Q1LH87 Cluster: Excinuclease ABC, C subunit-like protein;
n=1; Ralstonia metallidurans CH34|Rep: Excinuclease ABC,
C subunit-like protein - Ralstonia metallidurans (strain
CH34 / ATCC 43123 / DSM 2839)
Length = 98
Score = 42.3 bits (95), Expect = 0.012
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLV 498
W +Y+L + +YTGIT+++ RR QH GAK R+ LRL+
Sbjct: 15 WFLYLLECEGESIYTGITTDVQRRYAQHRAGTGAKYTRSRRPLRLL 60
>UniRef50_Q2ILJ9 Cluster: Excinuclease ABC, C subunit-like; n=2;
Cystobacterineae|Rep: Excinuclease ABC, C subunit-like -
Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 103
Score = 41.9 bits (94), Expect = 0.015
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVY 501
W VY+LR +G LY G T++L R+ +H+ +GA+ R+ + LV+
Sbjct: 17 WWVYLLRCGDGSLYAGATNDLAARVARHAAGRGARYTRSRLPVELVW 63
>UniRef50_Q2C4T8 Cluster: Putative uncharacterized protein; n=2;
Vibrionaceae|Rep: Putative uncharacterized protein -
Photobacterium sp. SKA34
Length = 105
Score = 41.9 bits (94), Expect = 0.015
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQHS-NKQGAKCLRNATNLRLVY 501
W VY++R + LY G+T+++ RR +H +K+GAK L+ L L +
Sbjct: 12 WYVYLIRTSSNTLYCGVTTDIERRFAEHQHSKKGAKYLKGKGPLTLAW 59
>UniRef50_A4B511 Cluster: Hypothetical URI domain endonuclease; n=1;
Alteromonas macleodii 'Deep ecotype'|Rep: Hypothetical
URI domain endonuclease - Alteromonas macleodii 'Deep
ecotype'
Length = 118
Score = 41.9 bits (94), Expect = 0.015
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 352 NKVWCVYILRQDNGKLYTGITSNLNRRIKQHSN--KQGAKCLRNATNL 489
N W +Y++ G+LYTGIT+ RRI QH K GAK L+ + L
Sbjct: 21 NTQWYLYLIENKLGQLYTGITTEPKRRIAQHRGELKGGAKALKGKSPL 68
>UniRef50_Q5QZJ7 Cluster: Predicted endonuclease containing a URI
domain; n=2; Alteromonadales|Rep: Predicted endonuclease
containing a URI domain - Idiomarina loihiensis
Length = 83
Score = 41.1 bits (92), Expect = 0.027
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQHS--NKQGAKCLRNATNLRLVY 501
W VY+++ + YTG+T+++ RR+ +H+ +K+GAK R + LV+
Sbjct: 3 WAVYLIKCADNTFYTGVTTDIERRVNEHNTDDKKGAKYTRARRPVALVW 51
>UniRef50_Q8E0F5 Cluster: UPF0213 protein SAG0778; n=8;
Streptococcus agalactiae|Rep: UPF0213 protein SAG0778 -
Streptococcus agalactiae serotype V
Length = 88
Score = 41.1 bits (92), Expect = 0.027
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = +1
Query: 367 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVY 501
+Y+L +G LYTG T+++ RR+ H+ +GAK R ++L+Y
Sbjct: 8 MYVLECSDGTLYTGYTTDVKRRLNTHNTGKGAKYTRARLPVKLLY 52
>UniRef50_Q1QV31 Cluster: Excinuclease ABC, C subunit-like protein;
n=1; Chromohalobacter salexigens DSM 3043|Rep:
Excinuclease ABC, C subunit-like protein -
Chromohalobacter salexigens (strain DSM 3043 / ATCC
BAA-138 / NCIMB13768)
Length = 99
Score = 40.7 bits (91), Expect = 0.036
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQH-SNKQGAKCLRNATNLRL 495
W +Y++ G LYTG+T+++ RR ++H K+GA+ LR L L
Sbjct: 13 WYLYLVETAAGALYTGVTTDVARRFREHRDGKRGARALRGKGPLTL 58
>UniRef50_Q06693 Cluster: Uncharacterized 12.5 kDa protein in
VLF1-GP41 intergenic region; n=12;
Nucleopolyhedrovirus|Rep: Uncharacterized 12.5 kDa
protein in VLF1-GP41 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 109
Score = 40.3 bits (90), Expect = 0.047
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2
Query: 677 GNHEKVEYIPLKLALND 727
GNHEKVEYIPLKLALND
Sbjct: 11 GNHEKVEYIPLKLALND 27
>UniRef50_Q3CK93 Cluster: Excinuclease ABC, C subunit, N-terminal;
n=1; Thermoanaerobacter ethanolicus ATCC 33223|Rep:
Excinuclease ABC, C subunit, N-terminal -
Thermoanaerobacter ethanolicus ATCC 33223
Length = 107
Score = 39.9 bits (89), Expect = 0.062
Identities = 21/54 (38%), Positives = 29/54 (53%)
Frame = +1
Query: 343 LYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYH 504
L K++ VY+L + GK+Y G TSN+ R H K+ K R RLVY+
Sbjct: 18 LEEGKMYYVYVLANEKGKIYIGYTSNIKERYLAHQRKE-VKSTREG-KWRLVYY 69
>UniRef50_UPI0000E0E642 Cluster: hypothetical protein OM2255_20122;
n=1; alpha proteobacterium HTCC2255|Rep: hypothetical
protein OM2255_20122 - alpha proteobacterium HTCC2255
Length = 100
Score = 39.5 bits (88), Expect = 0.082
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +1
Query: 358 VWCVYILRQDNGKLYTGITSNLNRRIKQHS--NKQGAKCLRNATNLRLV 498
+W VYI+ G YTG+T ++ RR +HS +GAK L+ L L+
Sbjct: 4 IWSVYIIENKLGHWYTGVTVDVARRFAEHSAGGVKGAKALKGKGPLTLI 52
>UniRef50_A6GJZ6 Cluster: Excinuclease ABC, C subunit-like protein;
n=1; Plesiocystis pacifica SIR-1|Rep: Excinuclease ABC,
C subunit-like protein - Plesiocystis pacifica SIR-1
Length = 95
Score = 39.1 bits (87), Expect = 0.11
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQHSNK--QGAKCLR 474
W +Y+LR +G+ Y GIT +L RR+ QH+ + GAK R
Sbjct: 20 WWLYLLRSASGRSYVGITVDLERRLAQHNGELPGGAKSTR 59
>UniRef50_A5FNC4 Cluster: Excinuclease ABC, C subunit domain
protein; n=5; Flavobacteriales|Rep: Excinuclease ABC, C
subunit domain protein - Flavobacterium johnsoniae UW101
Length = 107
Score = 39.1 bits (87), Expect = 0.11
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +1
Query: 355 KVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLR-NATNLRLVYHS 507
K + VYIL+ + YTG T+N+ RR+ +H++ +C N L LV+++
Sbjct: 2 KRYYVYILKCSDNSYYTGFTNNIERRLNEHNSGINKECYTFNKRPLELVFYA 53
>UniRef50_Q9RHE8 Cluster: Putative uncharacterized protein; n=1;
papaya bunchy top disease rickettsia|Rep: Putative
uncharacterized protein - papaya bunchy top disease
rickettsia
Length = 109
Score = 38.3 bits (85), Expect = 0.19
Identities = 20/34 (58%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +1
Query: 355 KVWCVYILRQ-DNGKLYTGITSNLNRRIKQHSNK 453
K + VYIL NG LY GITSN+ RRI +H NK
Sbjct: 44 KQYYVYILASIRNGTLYIGITSNIIRRICEHKNK 77
>UniRef50_Q97PR7 Cluster: UPF0213 protein SP_1535; n=73;
Bacilli|Rep: UPF0213 protein SP_1535 - Streptococcus
pneumoniae
Length = 99
Score = 38.3 bits (85), Expect = 0.19
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +1
Query: 367 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSG 510
+Y+L +G Y G T+++ RR+ H++ +GAK R ++L+Y G
Sbjct: 7 MYVLECRDGSYYIGYTTDMRRRLAIHNSGKGAKYTRARLPVKLIYAQG 54
>UniRef50_Q0IKZ8 Cluster: ORF121; n=1; Leucania separata nuclear
polyhedrosis virus|Rep: ORF121 - Leucania separata
nuclear polyhedrosis virus (LsNPV)
Length = 159
Score = 37.9 bits (84), Expect = 0.25
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +1
Query: 355 KVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHS 507
+++ +YI+R LYTG+++N+ RR++QH + + + L LVY S
Sbjct: 57 RLYALYIIRTSKNTLYTGVSTNVVRRLQQHRSGRASLNGGGKGPLLLVYQS 107
>UniRef50_A6T193 Cluster: Uncharacterized conserved protein; n=1;
Janthinobacterium sp. Marseille|Rep: Uncharacterized
conserved protein - Janthinobacterium sp. (strain
Marseille) (Minibacterium massiliensis)
Length = 130
Score = 37.9 bits (84), Expect = 0.25
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +1
Query: 328 IMATTLYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLV 498
+ ++ + W +Y+L NG +YTGI ++ R K H +GA+ R+ RL+
Sbjct: 20 VQKLSILSAMTWFLYLLECRNGSIYTGIAVDVQARYKAHMAGKGARYTRSNPPRRLL 76
>UniRef50_A0NJ82 Cluster: Methyltransferase; n=2; Oenococcus
oeni|Rep: Methyltransferase - Oenococcus oeni ATCC
BAA-1163
Length = 346
Score = 37.9 bits (84), Expect = 0.25
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +1
Query: 343 LYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATN--LRLVY 501
L+ NK + Y+++ + LY G + ++NRR H K+GAK R A L+LVY
Sbjct: 262 LHDNKYF-FYVIQTADNYLYAGTSDDVNRRFATHQAKKGAKFTRAAIRHPLKLVY 315
>UniRef50_Q8P698 Cluster: UPF0213 protein XCC3072; n=7;
Proteobacteria|Rep: UPF0213 protein XCC3072 -
Xanthomonas campestris pv. campestris
Length = 102
Score = 37.9 bits (84), Expect = 0.25
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +1
Query: 355 KVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLR 474
K W +Y+L NG Y GIT++L RR + H GA+ R
Sbjct: 5 KPWHLYLLLCRNGSYYAGITNDLERRFQAHLRGTGARYTR 44
>UniRef50_Q4L3E5 Cluster: UPF0213 protein SH2523; n=25; cellular
organisms|Rep: UPF0213 protein SH2523 - Staphylococcus
haemolyticus (strain JCSC1435)
Length = 82
Score = 37.9 bits (84), Expect = 0.25
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +1
Query: 367 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVY 501
VYI++ + LYTG T+N+ RI H+ +GAK + + LVY
Sbjct: 6 VYIVKCKDNSLYTGYTTNVEARIATHNAGKGAKYTKTRRPVVLVY 50
>UniRef50_Q7NMN4 Cluster: Gll0731 protein; n=1; Gloeobacter
violaceus|Rep: Gll0731 protein - Gloeobacter violaceus
Length = 118
Score = 37.5 bits (83), Expect = 0.33
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +1
Query: 367 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNA 480
VY++R NG LY G T++L R++ H++ +GA+ +R A
Sbjct: 5 VYLVRCRNGALYCGQTADLEARLRLHASGKGARSVRMA 42
>UniRef50_Q2G9Y5 Cluster: Excinuclease ABC, C subunit-like protein;
n=3; Sphingomonadales|Rep: Excinuclease ABC, C
subunit-like protein - Novosphingobium aromaticivorans
(strain DSM 12444)
Length = 99
Score = 37.5 bits (83), Expect = 0.33
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 367 VYILRQD-NGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSGGVRLQ 525
VYI+ G +Y G+TS+L RR+ QH N G+ + +RLV+ G ++
Sbjct: 10 VYIMADHYRGSMYVGVTSHLARRVFQHRNGTGSDYCARHSLVRLVWAERGENIE 63
>UniRef50_Q88VJ1 Cluster: UPF0213 protein lp_2058; n=6;
Lactobacillus|Rep: UPF0213 protein lp_2058 -
Lactobacillus plantarum
Length = 101
Score = 37.5 bits (83), Expect = 0.33
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +1
Query: 355 KVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKC--LRNATNLRLVYH 504
K + Y+L + LY G T NL RR+ H+ +GAK +R+ L+L+YH
Sbjct: 15 KKYYFYVLLCADQTLYGGFTDNLQRRLATHNAGKGAKYTRVRSRRPLQLIYH 66
>UniRef50_Q193D5 Cluster: Excinuclease ABC, C subunit-like; n=2;
Desulfitobacterium hafniense|Rep: Excinuclease ABC, C
subunit-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 103
Score = 37.1 bits (82), Expect = 0.44
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +1
Query: 358 VWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLR 474
++ VYIL + LYTG T L RRI++H+ GAK R
Sbjct: 1 MYWVYILHCADHTLYTGSTPRLERRIQEHNQGSGAKYTR 39
>UniRef50_Q07QY7 Cluster: Excinuclease ABC, C subunit domain
protein; n=3; Rhizobiales|Rep: Excinuclease ABC, C
subunit domain protein - Rhodopseudomonas palustris
(strain BisA53)
Length = 95
Score = 37.1 bits (82), Expect = 0.44
Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = +1
Query: 364 CVYIL-RQDNGKLYTGITSNLNRRIKQH 444
CVYI+ + NG LYTG+TSN+ RR +H
Sbjct: 5 CVYIVANRRNGTLYTGVTSNMPRRAHEH 32
>UniRef50_A4B9D9 Cluster: Excinuclease ABC, C subunit-like protein;
n=1; Reinekea sp. MED297|Rep: Excinuclease ABC, C
subunit-like protein - Reinekea sp. MED297
Length = 94
Score = 37.1 bits (82), Expect = 0.44
Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQHSNK--QGAKCLRNATNLRLVYH 504
W VY ++ +G YTGIT++ +RR++QH+ + GA+ + + LV++
Sbjct: 9 WWVYFVQCADGTFYTGITTDPHRRLRQHNGELVGGARYTASRRPVTLVFY 58
>UniRef50_Q15PT6 Cluster: Excinuclease ABC, C subunit-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: Excinuclease ABC, C
subunit-like - Pseudoalteromonas atlantica (strain T6c /
BAA-1087)
Length = 159
Score = 36.7 bits (81), Expect = 0.58
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQH--SNKQGAKCLRNATNLRLVY 501
W +YI+ YTGI +L++R QH S + AK LR L+++Y
Sbjct: 59 WFLYIIENKYQHYYTGICKDLSKRFAQHNSSGRLCAKALRGKGPLKMIY 107
>UniRef50_A7NLC7 Cluster: Excinuclease ABC C subunit domain protein;
n=14; Bacteria|Rep: Excinuclease ABC C subunit domain
protein - Roseiflexus castenholzii DSM 13941
Length = 107
Score = 36.7 bits (81), Expect = 0.58
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 367 VYILRQDNGK-LYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYH 504
VYIL N K +Y G+T+NL RRI +H NK + +LVY+
Sbjct: 8 VYILTNWNNKVMYIGMTNNLERRIYEHKNKMVDGFTKKYNVNKLVYY 54
>UniRef50_Q5UPY6 Cluster: Uncharacterized protein L300; n=1;
Acanthamoeba polyphaga mimivirus|Rep: Uncharacterized
protein L300 - Mimivirus
Length = 166
Score = 36.7 bits (81), Expect = 0.58
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Frame = +1
Query: 364 CVYILRQDNGKLYTGITSNLNRRIKQHSN----KQGAKCLRNATNLRLVYHSG 510
C I+ D+ + Y G T+N RR+ H+N ++GAK R T + ++Y SG
Sbjct: 6 CYLIMSLDSKETYIGSTNNRQRRLNDHNNLNPSRKGAKRTRGRTWIPILYISG 58
>UniRef50_Q4UJM5 Cluster: Endo/excinuclease amino terminal domain
protein; n=17; Proteobacteria|Rep: Endo/excinuclease
amino terminal domain protein - Rickettsia felis
(Rickettsia azadi)
Length = 144
Score = 36.3 bits (80), Expect = 0.77
Identities = 17/29 (58%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Frame = +1
Query: 367 VYIL-RQDNGKLYTGITSNLNRRIKQHSN 450
VYI+ + NG LYTG+TSNL +RI +H N
Sbjct: 54 VYIVTNKKNGILYTGVTSNLIKRIYEHKN 82
>UniRef50_Q2S0D1 Cluster: GIY-YIG catalytic domain, putative; n=3;
cellular organisms|Rep: GIY-YIG catalytic domain,
putative - Salinibacter ruber (strain DSM 13855)
Length = 100
Score = 36.3 bits (80), Expect = 0.77
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +1
Query: 367 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVY 501
VY++ +G YTG T+++ RR+++H+ AK R + LV+
Sbjct: 17 VYVIECRDGTYYTGYTTDVERRVEEHNEGTAAKYTRGRRPVTLVH 61
>UniRef50_Q1PYT5 Cluster: Predicted orf; n=1; Candidatus Kuenenia
stuttgartiensis|Rep: Predicted orf - Candidatus Kuenenia
stuttgartiensis
Length = 128
Score = 36.3 bits (80), Expect = 0.77
Identities = 15/36 (41%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Frame = +1
Query: 352 NKVWCVYIL-RQDNGKLYTGITSNLNRRIKQHSNKQ 456
+K++ +YI+ ++N LYTG+T+NL RR+ H K+
Sbjct: 50 DKLYSIYIMTNKNNTVLYTGVTNNLKRRVYWHREKR 85
>UniRef50_A3WNM7 Cluster: Predicted endonuclease containing a URI
domain; n=1; Idiomarina baltica OS145|Rep: Predicted
endonuclease containing a URI domain - Idiomarina
baltica OS145
Length = 101
Score = 36.3 bits (80), Expect = 0.77
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQHSNK 453
W VY++ + LYTG+T+ L RRI+QH+ +
Sbjct: 22 WYVYMVECGDRSLYTGVTTCLERRIRQHNGE 52
>UniRef50_Q84LK0 Cluster: DNA mismatch repair protein; n=7; core
eudicotyledons|Rep: DNA mismatch repair protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 1118
Score = 36.3 bits (80), Expect = 0.77
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 364 CVYILRQDNGKLYTGITSNLNRRIKQHSNKQG 459
CVY++R+ + +LY G T +L RI+ H K+G
Sbjct: 1026 CVYVMRRPDKRLYIGQTDDLEGRIRAHRAKEG 1057
>UniRef50_Q30TF2 Cluster: Excinuclease ABC, C subunit-like; n=2;
Proteobacteria|Rep: Excinuclease ABC, C subunit-like -
Thiomicrospira denitrificans (strain ATCC 33889 / DSM
1351)
Length = 79
Score = 35.9 bits (79), Expect = 1.0
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +1
Query: 373 ILRQDNGKLYTGITSNLNRRIKQH-SNKQGAKCLRNATNLRLVY 501
+L+ + LYTGIT +L+RR+ +H S+++ AK R L ++Y
Sbjct: 1 MLKCSDDTLYTGITIDLSRRLNEHNSSQKAAKYTRTRRPLEMIY 44
>UniRef50_Q0LV83 Cluster: Excinuclease ABC, C subunit-like; n=1;
Caulobacter sp. K31|Rep: Excinuclease ABC, C
subunit-like - Caulobacter sp. K31
Length = 122
Score = 35.5 bits (78), Expect = 1.3
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 367 VYILR-QDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYH 504
VYIL + G LY G+TS+L+RR+ +H G+ R RLVY+
Sbjct: 32 VYILASKPYGTLYIGVTSDLSRRVWEHREGLGSLFCRKYGVHRLVYY 78
>UniRef50_Q81W06 Cluster: UPF0213 protein BA_0032/GBAA0032/BAS0034;
n=9; Bacillus|Rep: UPF0213 protein
BA_0032/GBAA0032/BAS0034 - Bacillus anthracis
Length = 96
Score = 35.5 bits (78), Expect = 1.3
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 364 CVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVY 501
C Y++ +G Y G T+++ +RI H++ +GAK R + L Y
Sbjct: 7 CFYVVECSDGSYYAGYTNHIEKRIGTHNSGRGAKYTRARLPVVLKY 52
>UniRef50_Q51440 Cluster: UPF0213 protein in ldhD 5'region; n=3;
Lactobacillales|Rep: UPF0213 protein in ldhD 5'region -
Pediococcus acidilactici
Length = 98
Score = 35.1 bits (77), Expect = 1.8
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 370 YILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLR 474
Y+L + LYTG T NL +R+ +H++ QGAK R
Sbjct: 12 YVLWCADQTLYTGYTVNLKQRVARHNSGQGAKYTR 46
>UniRef50_UPI00003839BD Cluster: COG2827: Predicted endonuclease
containing a URI domain; n=1; Magnetospirillum
magnetotacticum MS-1|Rep: COG2827: Predicted
endonuclease containing a URI domain - Magnetospirillum
magnetotacticum MS-1
Length = 82
Score = 34.7 bits (76), Expect = 2.3
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +1
Query: 355 KVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSG 510
K W VY+L YTGI ++ R+ +H+ +GAK R RL + G
Sbjct: 2 KDWFVYVLLNGAHIAYTGIALDVEDRLARHNAGEGAKFTRGRGPWRLAHVEG 53
>UniRef50_Q62LB3 Cluster: Endo/excinuclease domain protein; n=20;
Betaproteobacteria|Rep: Endo/excinuclease domain protein
- Burkholderia mallei (Pseudomonas mallei)
Length = 298
Score = 34.7 bits (76), Expect = 2.3
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLR 474
W +Y++ +G +YTGIT+++ R +H+ GA+ R
Sbjct: 3 WYLYLIECADGSVYTGITTDVAARFDKHAQGAGARYTR 40
>UniRef50_Q2G9S1 Cluster: Excinuclease ABC, C subunit-like protein;
n=2; Novosphingobium aromaticivorans DSM 12444|Rep:
Excinuclease ABC, C subunit-like protein -
Novosphingobium aromaticivorans (strain DSM 12444)
Length = 118
Score = 34.7 bits (76), Expect = 2.3
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVY 501
W + + G +Y G+TS+L RR+ QH G+ + + RLVY
Sbjct: 16 WVYIMANRYRGGMYVGVTSDLVRRVWQHREGVGSSHVDDFGKTRLVY 62
>UniRef50_A5VFF5 Cluster: Excinuclease ABC, C subunit domain
protein; n=3; Alphaproteobacteria|Rep: Excinuclease ABC,
C subunit domain protein - Sphingomonas wittichii RW1
Length = 99
Score = 34.3 bits (75), Expect = 3.1
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 367 VYILRQD-NGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSGGVRLQN 528
VYI+ +G LY G+T++L R+ QH +G+ R +LVY R++N
Sbjct: 9 VYIMSNGVSGTLYLGVTADLAARVYQHRIGEGSAFCREHGLTKLVYAEPHDRIEN 63
>UniRef50_A5FFT3 Cluster: Excinuclease ABC, C subunit domain
protein; n=8; Bacteria|Rep: Excinuclease ABC, C subunit
domain protein - Flavobacterium johnsoniae UW101
Length = 101
Score = 34.3 bits (75), Expect = 3.1
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 397 LYTGITSNLNRRIKQHSNKQGAKCLRNATNLR-LVYH 504
+Y G+TSNL +RI +H NK+ K NL LVY+
Sbjct: 17 VYVGVTSNLPKRILEHKNKKYPKSFSAKYNLNILVYY 53
>UniRef50_A1RI21 Cluster: Excinuclease ABC, C subunit domain
protein; n=8; Bacteria|Rep: Excinuclease ABC, C subunit
domain protein - Shewanella sp. (strain W3-18-1)
Length = 102
Score = 34.3 bits (75), Expect = 3.1
Identities = 16/29 (55%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +1
Query: 367 VYILR-QDNGKLYTGITSNLNRRIKQHSN 450
VYI+ Q NG LY G+TS L +R+ QH N
Sbjct: 5 VYIMASQFNGTLYIGVTSQLEQRVWQHKN 33
>UniRef50_Q8RIL3 Cluster: UPF0213 protein FN1575; n=3; Fusobacterium
nucleatum|Rep: UPF0213 protein FN1575 - Fusobacterium
nucleatum subsp. nucleatum
Length = 100
Score = 34.3 bits (75), Expect = 3.1
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +1
Query: 367 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAK 465
+Y+LR ++G +YTG+ + +R ++H + +GAK
Sbjct: 5 LYMLRCEDGSIYTGVAKDYLKRYEEHLSAKGAK 37
>UniRef50_Q5WYF4 Cluster: Putative uncharacterized protein; n=3;
Legionella pneumophila|Rep: Putative uncharacterized
protein - Legionella pneumophila (strain Lens)
Length = 93
Score = 33.9 bits (74), Expect = 4.1
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +1
Query: 367 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKC 468
VYIL+ + YTG T NL +R+ QH +K C
Sbjct: 4 VYILQCSDKSYYTGQTDNLEKRLTQHQDKMIPGC 37
>UniRef50_Q39DX9 Cluster: Excinuclease ABC, C subunit-like; n=9;
Burkholderiaceae|Rep: Excinuclease ABC, C subunit-like -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 289
Score = 33.9 bits (74), Expect = 4.1
Identities = 12/39 (30%), Positives = 26/39 (66%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRN 477
W +Y++ + +YTGIT+++ R +H++ +GA+ R+
Sbjct: 3 WFLYLIECADDSVYTGITTDVAARFDEHASGKGARYTRS 41
>UniRef50_A5VJC3 Cluster: Excinuclease ABC, C subunit domain
protein; n=6; Lactobacillales|Rep: Excinuclease ABC, C
subunit domain protein - Lactobacillus reuteri F275
Length = 96
Score = 33.9 bits (74), Expect = 4.1
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 367 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLR--NATNLRLVY 501
+Y+L + Y G T+N+ RR H QGAK R L+L+Y
Sbjct: 8 IYVLYCADNSFYCGFTNNVKRRFHTHQTYQGAKYTRVKKRHPLKLIY 54
>UniRef50_A4JGU7 Cluster: Excinuclease ABC, C subunit domain
protein; n=1; Burkholderia vietnamiensis G4|Rep:
Excinuclease ABC, C subunit domain protein -
Burkholderia vietnamiensis (strain G4 / LMG 22486)
(Burkholderiacepacia (strain R1808))
Length = 261
Score = 33.9 bits (74), Expect = 4.1
Identities = 12/39 (30%), Positives = 26/39 (66%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRN 477
W +Y++ + +YTGIT+++ R +H++ +GA+ R+
Sbjct: 3 WFLYLIECADDSVYTGITTDVAARFDEHASGKGARYTRS 41
>UniRef50_A3J1S6 Cluster: Predicted endonuclease containing a URI
domain; n=2; Flavobacteriales|Rep: Predicted
endonuclease containing a URI domain - Flavobacteria
bacterium BAL38
Length = 101
Score = 33.9 bits (74), Expect = 4.1
Identities = 13/31 (41%), Positives = 23/31 (74%)
Frame = +1
Query: 355 KVWCVYILRQDNGKLYTGITSNLNRRIKQHS 447
K++ VYIL+ + YTGIT+++ RR+ +H+
Sbjct: 2 KLFYVYILKCKDDSFYTGITNSIERRLYEHN 32
>UniRef50_A0W851 Cluster: Excinuclease ABC, C subunit-like; n=2;
Bacteria|Rep: Excinuclease ABC, C subunit-like -
Geobacter lovleyi SZ
Length = 151
Score = 33.9 bits (74), Expect = 4.1
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 367 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVY 501
+YIL +G YTG T NL +R+ +H GA+ ++L+Y
Sbjct: 4 MYILECADGSYYTGSTWNLEKRLWEHQQGIGARHTAKRLPVKLLY 48
>UniRef50_P95364 Cluster: UPF0213 protein in glnA 3'region; n=5;
Neisseria|Rep: UPF0213 protein in glnA 3'region -
Neisseria gonorrhoeae
Length = 91
Score = 33.9 bits (74), Expect = 4.1
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSGGV 516
W VY++ +N Y GI+ N +R+ H+ +GAK R + + +GG+
Sbjct: 6 WSVYLILCENSAFYCGISPNPQQRLAIHTAGKGAKYTRVFKPVAMRIVAGGM 57
>UniRef50_Q0LU34 Cluster: Excinuclease ABC, C subunit-like; n=4;
Proteobacteria|Rep: Excinuclease ABC, C subunit-like -
Caulobacter sp. K31
Length = 106
Score = 33.5 bits (73), Expect = 5.4
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 367 VYILR-QDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYH 504
VYI+ Q NG LY G T +L RR+ +H G++ R LV++
Sbjct: 16 VYIVASQRNGTLYIGSTDDLQRRVWEHKEADGSRFTRKHGCTILVWY 62
>UniRef50_A4G800 Cluster: Putative uncharacterized protein; n=3;
Burkholderiales|Rep: Putative uncharacterized protein -
Herminiimonas arsenicoxydans
Length = 100
Score = 33.5 bits (73), Expect = 5.4
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 361 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLV 498
W +Y+L +G +YTGI ++ R H +GA+ R+ RL+
Sbjct: 3 WFLYLLECRDGSIYTGIAVDVAARYAAHEKGKGARYTRSHPPRRLL 48
>UniRef50_A1G1C7 Cluster: Excinuclease ABC, C subunit-like; n=2;
Proteobacteria|Rep: Excinuclease ABC, C subunit-like -
Stenotrophomonas maltophilia R551-3
Length = 174
Score = 33.5 bits (73), Expect = 5.4
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +1
Query: 319 HCIIMATTLYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLV 498
H MA++L + W +Y+L +G Y GI+++++ R H +GA+ R LR++
Sbjct: 83 HNPAMASSL---RPWFLYLLECRDGSYYAGISTDVDARFAAHQAGKGARYTRARPPLRVL 139
>UniRef50_Q9FHS4 Cluster: Emb|CAB76036.1; n=1; Arabidopsis
thaliana|Rep: Emb|CAB76036.1 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 170
Score = 33.5 bits (73), Expect = 5.4
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Frame = +1
Query: 352 NKVWCVYILRQDNG--KLYTGITSNLNRRIKQHSN--KQGAK 465
+K W VY++ K Y GIT++ +RR+KQH+ + GAK
Sbjct: 51 SKSWSVYLILSTTEPIKTYVGITTDFSRRLKQHNGEIRGGAK 92
>UniRef50_O31414 Cluster: UPF0213 protein yazA; n=4; Bacillus|Rep:
UPF0213 protein yazA - Bacillus subtilis
Length = 99
Score = 33.5 bits (73), Expect = 5.4
Identities = 12/44 (27%), Positives = 28/44 (63%)
Frame = +1
Query: 370 YILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVY 501
Y+++ + Y G T++L++R+K H++ +GAK + + L++
Sbjct: 9 YVVKCKDNSWYAGYTNDLHKRVKTHNDGKGAKYTKVRRPVELIF 52
>UniRef50_Q4AQ38 Cluster: Excinuclease ABC, C subunit, N-terminal;
n=1; Chlorobium phaeobacteroides BS1|Rep: Excinuclease
ABC, C subunit, N-terminal - Chlorobium phaeobacteroides
BS1
Length = 84
Score = 33.1 bits (72), Expect = 7.2
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 358 VWCVYILRQDNGK-LYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYH 504
++ VY+LR + Y G TS+L+RRI +H N+ +K + L LVY+
Sbjct: 1 MYYVYVLRSKKDEHYYIGYTSDLDRRIDEH-NQGFSKSTAHRRPLELVYY 49
>UniRef50_Q1QAA0 Cluster: Putative uncharacterized protein; n=1;
Psychrobacter cryohalolentis K5|Rep: Putative
uncharacterized protein - Psychrobacter cryohalolentis
(strain K5)
Length = 911
Score = 33.1 bits (72), Expect = 7.2
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +2
Query: 35 CVGQHIQLHGRAGD-ASRQATQHVPKRYLPNVGRQRGQFARRSFDQKRLQG*LDRIGVPK 211
C+ + +GR G+ RQ +H+ + ++ G R Q +SF Q +R+G K
Sbjct: 680 CLDNWLDNYGRDGEHEQRQIIKHI-QAFIELHGSSRFQPCEKSFYADSEQKVTNRVGYRK 738
Query: 212 RNSKTFYFSTNKLQQD 259
+ S +YF N +++
Sbjct: 739 QGSDDYYFYINAFEKE 754
>UniRef50_Q0UAL6 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 33.1 bits (72), Expect = 7.2
Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +1
Query: 361 WCVYILRQDNGK-LYTGITSNLNRRIKQH--SNKQGAK 465
+C Y+LR N K Y G T N RR+ QH S+K GAK
Sbjct: 16 YCCYLLRSKNRKSYYIGSTPNPARRLGQHNGSSKGGAK 53
>UniRef50_Q186F2 Cluster: Putative endonuclease; n=1; Clostridium
difficile 630|Rep: Putative endonuclease - Clostridium
difficile (strain 630)
Length = 103
Score = 32.7 bits (71), Expect = 9.5
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 358 VWCVYILRQDNGKLYTGITSNLNRRIKQH 444
++ YI+R + LYTG TSN+ RR+ +H
Sbjct: 1 MYFTYIIRCKDDSLYTGYTSNIVRRMNEH 29
>UniRef50_Q9CEL6 Cluster: UPF0213 protein ysiG; n=3; Lactococcus
lactis|Rep: UPF0213 protein ysiG - Lactococcus lactis
subsp. lactis (Streptococcus lactis)
Length = 104
Score = 32.7 bits (71), Expect = 9.5
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +1
Query: 370 YILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLV 498
YIL+ + LY G T++L +R+ H++ +GAK + ++L+
Sbjct: 7 YILQCSDKTLYCGYTTDLEKRLATHNSGKGAKYTKTRLPVKLL 49
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 708,692,140
Number of Sequences: 1657284
Number of extensions: 13483800
Number of successful extensions: 38565
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 37097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38526
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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