Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120600.Seq
         (728 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC035561-1|AAH35561.1|  493|Homo sapiens hexosaminidase (glycosy...    31   4.2  
BC131529-1|AAI31530.1|  868|Homo sapiens eEF1A2 binding protein ...    31   5.6  
AY245430-1|AAO92932.1|  868|Homo sapiens eEF1A2 binding protein ...    31   5.6  
X77690-1|CAA54772.1|  138|Homo sapiens K222 protein.                   30   9.8  

>BC035561-1|AAH35561.1|  493|Homo sapiens hexosaminidase (glycosyl
           hydrolase family 20, catalytic domain) containing
           protein.
          Length = 493

 Score = 31.1 bits (67), Expect = 4.2
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +2

Query: 332 WRRLCTPTRCGACTFCGRTMENC 400
           WR+ CTP  C  C  C RT   C
Sbjct: 385 WRKTCTPA-CSGCKLCCRTSARC 406


>BC131529-1|AAI31530.1|  868|Homo sapiens eEF1A2 binding protein
           protein.
          Length = 868

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 21/43 (48%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
 Frame = -1

Query: 548 CIPCGR-RF-----CSRTPPL*YTSRKLVALRKHLAPCLFECC 438
           CIP  R RF     C R P L    R LV LR HL P   ECC
Sbjct: 750 CIPRQRDRFTVKAPCYREPDLSQKPRFLVGLRSHLLPQGCECC 792


>AY245430-1|AAO92932.1|  868|Homo sapiens eEF1A2 binding protein
           protein.
          Length = 868

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 21/43 (48%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
 Frame = -1

Query: 548 CIPCGR-RF-----CSRTPPL*YTSRKLVALRKHLAPCLFECC 438
           CIP  R RF     C R P L    R LV LR HL P   ECC
Sbjct: 750 CIPRQRDRFTVKAPCYREPDLSQKPRFLVGLRSHLLPQGCECC 792


>X77690-1|CAA54772.1|  138|Homo sapiens K222 protein.
          Length = 138

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
 Frame = +1

Query: 325 IIMATTLY----TNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLR 492
           I+ +T +Y     + VWCVY+      KL    T   +RR  +   +QG + +  + +  
Sbjct: 33  IVSSTQIYLAISVDSVWCVYLSNLHKRKLLAKSTKAFSRR--KSGGRQGEEDIHLSLSPE 90

Query: 493 LVYHSG 510
           L+Y +G
Sbjct: 91  LLYKAG 96


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,230,142
Number of Sequences: 237096
Number of extensions: 2049952
Number of successful extensions: 4899
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4899
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)