Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120600.Seq
         (728 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095524-1|AAM12255.1| 1258|Drosophila melanogaster LD41783p pro...    29   8.6  
AE014134-3368|AAF53983.2| 2759|Drosophila melanogaster CG8677-PA...    29   8.6  
AE013599-1841|AAF58281.4| 4012|Drosophila melanogaster CG30069-P...    29   8.6  

>AY095524-1|AAM12255.1| 1258|Drosophila melanogaster LD41783p protein.
          Length = 1258

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
 Frame = +3

Query: 297  LGQTRKDALYNHGDDSVHQQGVVRVHSAAGQWKIVHGHHEQP*QTHKTAFEQTRRQVFA- 473
            L  + KD+L +  D S   +G  R     G   ++H    QP +T   A ++ + +V A 
Sbjct: 1084 LAMSVKDSLRSAKDQSPVPEGSARRSGRRGGPAVIHSELPQPKRTRGGARDKMQPEVNAE 1143

Query: 474  --QRNQFTARVSQRRRTTTKPPPA 539
              Q ++   ++S + ++  K  PA
Sbjct: 1144 LKQESEDDEKISTKIKSEAKDDPA 1167


>AE014134-3368|AAF53983.2| 2759|Drosophila melanogaster CG8677-PA
            protein.
          Length = 2759

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
 Frame = +3

Query: 297  LGQTRKDALYNHGDDSVHQQGVVRVHSAAGQWKIVHGHHEQP*QTHKTAFEQTRRQVFA- 473
            L  + KD+L +  D S   +G  R     G   ++H    QP +T   A ++ + +V A 
Sbjct: 1084 LAMSVKDSLRSAKDQSPVPEGSARRSGRRGGPAVIHSELPQPKRTRGGARDKMQPEVNAE 1143

Query: 474  --QRNQFTARVSQRRRTTTKPPPA 539
              Q ++   ++S + ++  K  PA
Sbjct: 1144 LKQESEDDEKISTKIKSEAKDDPA 1167


>AE013599-1841|AAF58281.4| 4012|Drosophila melanogaster CG30069-PA
           protein.
          Length = 4012

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 11/25 (44%), Positives = 20/25 (80%)
 Frame = +3

Query: 495 RVSQRRRTTTKPPPAWNTILSVNAA 569
           +VSQ+++++T PPPA +T  S ++A
Sbjct: 10  QVSQQQQSSTSPPPATSTTTSTSSA 34


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,461,705
Number of Sequences: 53049
Number of extensions: 668138
Number of successful extensions: 1970
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1967
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)