Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120599.Seq
(678 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93; Eukaryo... 144 2e-33
UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8; Euteleostomi... 133 4e-30
UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN full... 127 2e-28
UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82; Eukaryo... 124 2e-27
UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4; Eukaryot... 99 1e-19
UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21; Eukaryo... 94 2e-18
UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces ... 91 2e-17
UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19; Eukaryo... 84 3e-15
UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;... 83 5e-15
UniRef50_UPI000049933B Cluster: conserved hypothetical protein; ... 75 1e-12
UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whol... 75 1e-12
UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma j... 70 6e-11
UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamb... 60 5e-08
UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7; Archaea... 60 5e-08
UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillard... 59 1e-07
UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitoz... 56 8e-07
UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5; Archaea... 48 3e-04
UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole gen... 47 5e-04
UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella... 45 0.002
UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5; Euryarc... 44 0.003
UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6; Archaea... 39 0.097
UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1; Methano... 39 0.097
UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4; Archaea... 36 1.2
UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3; Desulfu... 35 1.6
UniRef50_Q4V8R6 Cluster: Zgc:114190; n=2; Danio rerio|Rep: Zgc:1... 34 3.7
UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:... 34 3.7
UniRef50_A4B0L3 Cluster: Putative oxidoreductase subunit; n=1; A... 33 4.8
UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;... 33 6.4
UniRef50_Q2W531 Cluster: TPR repeat; n=3; Magnetospirillum|Rep: ... 33 6.4
UniRef50_A7D873 Cluster: Exodeoxyribonuclease III Xth; n=2; Meth... 33 6.4
UniRef50_Q8TN82 Cluster: Predicted protein; n=1; Methanosarcina ... 33 6.4
UniRef50_Q8ZTB8 Cluster: 30S ribosomal protein S8e; n=6; Archaea... 33 6.4
UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium ja... 33 8.4
UniRef50_Q5CW62 Cluster: FH2 domain containing protein; n=2; Cry... 33 8.4
UniRef50_A7F1W3 Cluster: Putative uncharacterized protein; n=1; ... 33 8.4
UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1; ... 33 8.4
UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3; Euryarc... 33 8.4
>UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93;
Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens
(Human)
Length = 208
Score = 144 bits (348), Expect = 2e-33
Identities = 86/179 (48%), Positives = 109/179 (60%), Gaps = 10/179 (5%)
Frame = +3
Query: 6 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARSSAYPLRSFTWWKY*VPCAAS 185
MGISRD+WHKRR TG + + ++ + + + A + P R T V
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELG----RPAANTKIGPRRIHT---VRVRGGNK 53
Query: 186 GHR*LLLGIGMFNSQNPYH*CCV----------NASNNELVRTKTLVKNAIVVVDATPFR 335
+R L L +G F+ + CC NASNNELVRTKTLVKN IV++D+TP+R
Sbjct: 54 KYRALRLDVGNFSWGSE---CCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYR 110
Query: 336 QWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTG 512
QWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ LEEQF G
Sbjct: 111 QWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQG 169
Score = 125 bits (302), Expect = 9e-28
Identities = 56/67 (83%), Positives = 60/67 (89%)
Frame = +1
Query: 52 GKRAPIRKKRKYELGRPAANTRLGPRRIHSVRSRGGNTEYRALRLDTGNFSWGSECSTRK 231
GKR P KKRKYELGRPAANT++GPRRIH+VR RGGN +YRALRLD GNFSWGSEC TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRK 75
Query: 232 TRIIDVV 252
TRIIDVV
Sbjct: 76 TRIIDVV 82
Score = 80.2 bits (189), Expect = 4e-14
Identities = 33/40 (82%), Positives = 39/40 (97%)
Frame = +2
Query: 509 GRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 628
G+LLAC+ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 169 GKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8;
Euteleostomi|Rep: Ribosomal protein S8 - Homo sapiens
(Human)
Length = 188
Score = 133 bits (321), Expect = 4e-30
Identities = 61/86 (70%), Positives = 71/86 (82%)
Frame = +3
Query: 255 NASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQ 434
NASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+
Sbjct: 64 NASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSK 123
Query: 435 KTARKYLARQRLAKVEGALEEQFHTG 512
K +KY R++ AK+ LEEQF G
Sbjct: 124 KIQKKYDERKKNAKISSLLEEQFQQG 149
Score = 80.2 bits (189), Expect = 4e-14
Identities = 33/40 (82%), Positives = 39/40 (97%)
Frame = +2
Query: 509 GRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 628
G+LLAC+ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 149 GKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 188
Score = 68.5 bits (160), Expect = 1e-10
Identities = 30/38 (78%), Positives = 33/38 (86%)
Frame = +1
Query: 52 GKRAPIRKKRKYELGRPAANTRLGPRRIHSVRSRGGNT 165
GKR P KKRKYELGRPAANT++GPRRIH+VR RGG T
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGCT 53
>UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence; n=9;
Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence - Mus
musculus (Mouse)
Length = 152
Score = 127 bits (307), Expect = 2e-28
Identities = 77/159 (48%), Positives = 97/159 (61%), Gaps = 10/159 (6%)
Frame = +3
Query: 6 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARSSAYPLRSFTWWKY*VPCAAS 185
MGISRD+WHKRR TG + + ++ + + + A + P R T V
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELG----RPAANTKIGPRRIHT---VRVRGGNK 53
Query: 186 GHR*LLLGIGMFNSQNPYH*CCV----------NASNNELVRTKTLVKNAIVVVDATPFR 335
+R L L +G F+ + CC NASNNELVRTKTLVKN IV++D+TP+R
Sbjct: 54 KYRALRLDVGNFSWGSE---CCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYR 110
Query: 336 QWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 452
QWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY
Sbjct: 111 QWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKY 149
Score = 125 bits (302), Expect = 9e-28
Identities = 56/67 (83%), Positives = 60/67 (89%)
Frame = +1
Query: 52 GKRAPIRKKRKYELGRPAANTRLGPRRIHSVRSRGGNTEYRALRLDTGNFSWGSECSTRK 231
GKR P KKRKYELGRPAANT++GPRRIH+VR RGGN +YRALRLD GNFSWGSEC TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRK 75
Query: 232 TRIIDVV 252
TRIIDVV
Sbjct: 76 TRIIDVV 82
>UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82;
Eukaryota|Rep: 40S ribosomal protein S8 - Drosophila
melanogaster (Fruit fly)
Length = 208
Score = 124 bits (300), Expect = 2e-27
Identities = 58/88 (65%), Positives = 71/88 (80%), Gaps = 2/88 (2%)
Frame = +3
Query: 255 NASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEA--IINKKR 428
NASNNELVRTKTLVKN+IVV+DATPFRQWYE+HY LPLGRK+ K + E+ ++ KKR
Sbjct: 84 NASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLPLGRKRNPKHAQKEDENDVLTKKR 143
Query: 429 SQKTARKYLARQRLAKVEGALEEQFHTG 512
S+K +KYL RQ+ KVE ALE+QF +G
Sbjct: 144 SEKVMKKYLERQKYGKVEQALEDQFTSG 171
Score = 105 bits (253), Expect = 7e-22
Identities = 48/67 (71%), Positives = 56/67 (83%)
Frame = +1
Query: 52 GKRAPIRKKRKYELGRPAANTRLGPRRIHSVRSRGGNTEYRALRLDTGNFSWGSECSTRK 231
GKR +RKKRK+ELGRPAANT+LG R+H VR+RGGNT+ RALRL+TGNF+W SE RK
Sbjct: 16 GKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLETGNFAWASEGVARK 75
Query: 232 TRIIDVV 252
TRI DVV
Sbjct: 76 TRIADVV 82
Score = 77.8 bits (183), Expect = 2e-13
Identities = 32/38 (84%), Positives = 38/38 (100%)
Frame = +2
Query: 509 GRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 622
GR+LAC++SRPGQCGR+DGYILEGKELEFYL+KIKSK+
Sbjct: 171 GRILACISSRPGQCGRSDGYILEGKELEFYLKKIKSKK 208
>UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4;
Eukaryota|Rep: 40S ribosomal protein S8 - Theileria
parva
Length = 188
Score = 98.7 bits (235), Expect = 1e-19
Identities = 44/68 (64%), Positives = 57/68 (83%), Gaps = 1/68 (1%)
Frame = +1
Query: 52 GKRAPI-RKKRKYELGRPAANTRLGPRRIHSVRSRGGNTEYRALRLDTGNFSWGSECSTR 228
G R P+ +KKRKYELGRP++NT+LG + + VR RGGN ++RALRLD+GNFSWGS+ TR
Sbjct: 15 GGRYPVHKKKRKYELGRPSSNTKLGSKLVRKVRCRGGNLKFRALRLDSGNFSWGSQNVTR 74
Query: 229 KTRIIDVV 252
KTR++DVV
Sbjct: 75 KTRVMDVV 82
Score = 72.1 bits (169), Expect = 1e-11
Identities = 55/132 (41%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Frame = +3
Query: 6 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARSSAYPLRSFTWWKY*VPCAAS 185
MGISRD HKRR TG H ++ + R + + +R V C
Sbjct: 1 MGISRDSRHKRRLTGGRYPVHKKKRKY--ELGRPSSNTKLGSKLVRK-------VRCRGG 51
Query: 186 G--HR*LLLGIGMFN--SQNPYH*CCV-----NASNNELVRTKTLVKNAIVVVDATPFRQ 338
R L L G F+ SQN V NAS+NELVRTKTLVKNAIV VD TPF+
Sbjct: 52 NLKFRALRLDSGNFSWGSQNVTRKTRVMDVVYNASSNELVRTKTLVKNAIVTVDPTPFKL 111
Query: 339 WYESHYTLPLGR 374
W+++HY L LG+
Sbjct: 112 WFKTHYGLELGK 123
Score = 66.5 bits (155), Expect = 6e-10
Identities = 26/38 (68%), Positives = 33/38 (86%)
Frame = +2
Query: 509 GRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 622
GRLLAC++SRPGQCGR DGY+LEG+EL FY R++ K+
Sbjct: 149 GRLLACISSRPGQCGRCDGYVLEGEELNFYRRRMDKKK 186
>UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21;
Eukaryota|Rep: 40S ribosomal protein S8 - Zea mays
(Maize)
Length = 221
Score = 94.3 bits (224), Expect = 2e-18
Identities = 45/68 (66%), Positives = 53/68 (77%), Gaps = 1/68 (1%)
Frame = +1
Query: 52 GKRAPIRKKRKYELGRPAANTRLGPRR-IHSVRSRGGNTEYRALRLDTGNFSWGSECSTR 228
GK+ RKKRKYELGR ANT+L + + VR RGGN ++RALRLDTGN+SWGSE TR
Sbjct: 16 GKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTR 75
Query: 229 KTRIIDVV 252
KTRI+DVV
Sbjct: 76 KTRILDVV 83
Score = 82.2 bits (194), Expect = 1e-14
Identities = 65/180 (36%), Positives = 91/180 (50%), Gaps = 11/180 (6%)
Frame = +3
Query: 6 MGISRDHWHKRRATGWETCAHTQEE--EV*VRASRCKHQARSSAYPLRSFTW-WKY*VPC 176
MGISRD HKRRATG + A ++ E+ + + K + + +R K+
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 177 AASGHR*LLLGIGMFNSQNPYH*CCVNASNNELVRTKTLVKNAIVVVDATPFRQWYESHY 356
+G+ G + NASNNELVRT+TLVK+AIV VDA PF+QWY +HY
Sbjct: 61 LDTGN--YSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHY 118
Query: 357 TLPLGRKK--------GAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTG 512
+ +GRKK A+ E E A K+S RK R+ ++ +EEQF +G
Sbjct: 119 GVDIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSG 178
Score = 76.6 bits (180), Expect = 5e-13
Identities = 31/40 (77%), Positives = 38/40 (95%)
Frame = +2
Query: 509 GRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 628
GRLLAC++SRPGQCGRADGYILEGKELEFY++K++ K+ K
Sbjct: 178 GRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK 217
>UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces
capsulatus NAm1|Rep: Ribosomal protein S8 - Ajellomyces
capsulatus NAm1
Length = 141
Score = 91.5 bits (217), Expect = 2e-17
Identities = 41/65 (63%), Positives = 51/65 (78%)
Frame = +1
Query: 55 KRAPIRKKRKYELGRPAANTRLGPRRIHSVRSRGGNTEYRALRLDTGNFSWGSECSTRKT 234
KR+ RKKR +E GR ANTR+GP+RIH VR+RGGN ++R LRL++GNFSWGSE RK
Sbjct: 17 KRSHYRKKRAFEKGRQPANTRIGPKRIHLVRTRGGNQKFRGLRLESGNFSWGSEGIARKV 76
Query: 235 RIIDV 249
R+I V
Sbjct: 77 RVIVV 81
Score = 55.2 bits (127), Expect = 1e-06
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +2
Query: 509 GRLLACVASRPGQCGRADGYILEGKELEFYLRKIK 613
GRL A V+SRPGQ GR DGYILEG+EL FY R I+
Sbjct: 106 GRLYAVVSSRPGQSGRVDGYILEGEELAFYQRAIR 140
>UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19;
Eukaryota|Rep: 40S ribosomal protein S8 - Leishmania
major
Length = 220
Score = 84.2 bits (199), Expect = 3e-15
Identities = 40/67 (59%), Positives = 48/67 (71%)
Frame = +1
Query: 52 GKRAPIRKKRKYELGRPAANTRLGPRRIHSVRSRGGNTEYRALRLDTGNFSWGSECSTRK 231
GK RK+ K ELGR ANTRLG RR+ VR+RGGN + RALRLDTGNF+W SE +
Sbjct: 16 GKTKIHRKRMKAELGRLPANTRLGARRVSPVRARGGNFKIRALRLDTGNFAWASEAIAHR 75
Query: 232 TRIIDVV 252
R++DVV
Sbjct: 76 VRLLDVV 82
Score = 70.1 bits (164), Expect = 5e-11
Identities = 44/99 (44%), Positives = 56/99 (56%), Gaps = 13/99 (13%)
Frame = +3
Query: 255 NASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPL-GRKKGAKLTEAEE-------- 407
NA++NELVRTKTLVKN IV VDA PF++WY HY + L KK K A E
Sbjct: 84 NATSNELVRTKTLVKNCIVAVDAAPFKRWYAKHYGIDLDADKKSTKAAVAAEKKGRKSAH 143
Query: 408 AIINK----KRSQKTARKYLARQRLAKVEGALEEQFHTG 512
A +K K S K R++ R+R +VE A+ +Q G
Sbjct: 144 AAADKYDVNKASPKLQREWTRRRRNHRVEKAIADQLREG 182
Score = 56.4 bits (130), Expect = 6e-07
Identities = 23/38 (60%), Positives = 32/38 (84%)
Frame = +2
Query: 509 GRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 622
GR+LA + SRPGQ GRADG +LEG EL+FYL++++ K+
Sbjct: 182 GRVLARITSRPGQSGRADGILLEGAELQFYLKRLEKKK 219
>UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;
Zea mays|Rep: Putative 40S ribosomal protein S8 - Zea
mays (Maize)
Length = 245
Score = 83.4 bits (197), Expect = 5e-15
Identities = 39/68 (57%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Frame = +1
Query: 52 GKRAPIRKKRKYELGRPAANTRLGPRR-IHSVRSRGGNTEYRALRLDTGNFSWGSECSTR 228
G P+++++ YELGR ANT+L + + VR RGGNT++RALR DT N+SWGSE TR
Sbjct: 113 GPFCPLQEEQGYELGRQPANTKLSSNKTVRRVRVRGGNTKWRALRFDTCNYSWGSEALTR 172
Query: 229 KTRIIDVV 252
KTRI+DVV
Sbjct: 173 KTRILDVV 180
Score = 68.1 bits (159), Expect = 2e-10
Identities = 29/50 (58%), Positives = 40/50 (80%)
Frame = +3
Query: 258 ASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 407
A+NNELVRT+TLVK+AIV VDA PF+QWY +HY + +GRKK + + ++
Sbjct: 183 ATNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKVSVAKKDD 232
>UniRef50_UPI000049933B Cluster: conserved hypothetical protein;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 237
Score = 75.4 bits (177), Expect = 1e-12
Identities = 35/67 (52%), Positives = 48/67 (71%)
Frame = +1
Query: 52 GKRAPIRKKRKYELGRPAANTRLGPRRIHSVRSRGGNTEYRALRLDTGNFSWGSECSTRK 231
GK+ ++KK+K +GR ANTRLG R+H VR R G + RALRL+ GNFSW S+ T+
Sbjct: 16 GKKNSMQKKKKNTMGRQPANTRLGAIRVHDVRCRYGIIKRRALRLENGNFSWASQSITKG 75
Query: 232 TRIIDVV 252
T+I++VV
Sbjct: 76 TKILNVV 82
Score = 61.7 bits (143), Expect = 2e-08
Identities = 25/38 (65%), Positives = 32/38 (84%)
Frame = +2
Query: 509 GRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 622
GR+LAC++SRPGQ G +GYILEGKEL+FY +KI K+
Sbjct: 199 GRVLACISSRPGQTGSVEGYILEGKELDFYSKKISDKK 236
Score = 48.0 bits (109), Expect = 2e-04
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Frame = +3
Query: 255 NASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKK--- 425
NAS+N+ VRT TLVK AI+ +D PFR W+ Y + K E+ KK
Sbjct: 84 NASDNDFVRTNTLVKGAIIEIDPAPFRLWFLKFYGKDIASTDYYKSLESATFKTEKKVVV 143
Query: 426 -RSQKTARKYLARQRLAKVEGAL 491
+ ++ K +A Q++A+ + AL
Sbjct: 144 PKEEENKEKTIA-QQIAETQVAL 165
>UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whole
genome shotgun sequence; n=2; Coelomata|Rep: Chromosome
undetermined SCAF13783, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 149
Score = 75.4 bits (177), Expect = 1e-12
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = +2
Query: 521 ACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 628
AC+ASRPGQCGRADGYILEGKELEFYLRKIK+K+ K
Sbjct: 114 ACIASRPGQCGRADGYILEGKELEFYLRKIKAKKGK 149
>UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03085 protein - Schistosoma
japonicum (Blood fluke)
Length = 120
Score = 69.7 bits (163), Expect = 6e-11
Identities = 28/40 (70%), Positives = 37/40 (92%)
Frame = +2
Query: 509 GRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 628
GRLLAC++S+PGQ GRADGY+ EGKELEF+ +K+K+K+AK
Sbjct: 81 GRLLACISSKPGQVGRADGYLFEGKELEFFSKKLKAKKAK 120
Score = 56.0 bits (129), Expect = 8e-07
Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 9/81 (11%)
Frame = +3
Query: 297 KNAIVVVDATPFRQWYESHYTLPLGR-----KKGAKLT--EAEEAIINKKRSQKTARKYL 455
K+AIV + PFRQW+E+ Y LG KKG +T EE + KKRS+ +K+
Sbjct: 1 KSAIVQIGGAPFRQWFEAPYLKELGPPKVVCKKGPSVTPENPEEDFLLKKRSKSALKKFE 60
Query: 456 ARQRL--AKVEGALEEQFHTG 512
RQ L A VE +L+E+F TG
Sbjct: 61 TRQALPQANVEESLKEEFVTG 81
>UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamblia
ATCC 50803|Rep: Ribosomal protein S8 - Giardia lamblia
ATCC 50803
Length = 174
Score = 60.1 bits (139), Expect = 5e-08
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 9/69 (13%)
Frame = +1
Query: 73 KKRKYELGRPAANTRL---------GPRRIHSVRSRGGNTEYRALRLDTGNFSWGSECST 225
KKRKY LGR ANT+L ++I ++R RGGN + RALRL G+F+WGS +
Sbjct: 23 KKRKYNLGRQPANTKLIVKVTSKKNEGQKISTIRCRGGNIKRRALRLSHGSFAWGSADIS 82
Query: 226 RKTRIIDVV 252
K RI+ VV
Sbjct: 83 HKARILQVV 91
Score = 49.2 bits (112), Expect = 9e-05
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = +2
Query: 515 LLACVASRPGQCGRADGYILEGKELEFYLRKIKSK 619
+LA ++SRPGQ G ADGYILEG EL FY +K+ K
Sbjct: 140 ILARISSRPGQVGTADGYILEGPELLFYQKKLAPK 174
Score = 38.7 bits (86), Expect = 0.13
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +3
Query: 255 NASNNELVRTKTLVKNAIVVVDATPFR 335
N+++NELVRT TLVK +V +D+ PF+
Sbjct: 93 NSTSNELVRTNTLVKGCVVQIDSAPFK 119
>UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7;
Archaea|Rep: 30S ribosomal protein S8e - Picrophilus
torridus
Length = 125
Score = 60.1 bits (139), Expect = 5e-08
Identities = 29/66 (43%), Positives = 38/66 (57%)
Frame = +1
Query: 43 PPAGKRAPIRKKRKYELGRPAANTRLGPRRIHSVRSRGGNTEYRALRLDTGNFSWGSECS 222
P GK P KR+YELGR TRLG R + +RS GGN+++ LR D N + +
Sbjct: 12 PSGGKLRPNHSKRRYELGREPTLTRLGDRELRKIRSYGGNSKFALLRCDYANVYNPKDKT 71
Query: 223 TRKTRI 240
TRK +I
Sbjct: 72 TRKVKI 77
>UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillardia
theta|Rep: 40S ribosomal protein S8 - Guillardia theta
(Cryptomonas phi)
Length = 178
Score = 58.8 bits (136), Expect = 1e-07
Identities = 24/37 (64%), Positives = 33/37 (89%)
Frame = +2
Query: 509 GRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSK 619
G++LA + SRPGQ GRADGYILEG+EL+++L+KI+ K
Sbjct: 142 GKILARICSRPGQSGRADGYILEGQELDYFLKKIQKK 178
Score = 52.0 bits (119), Expect = 1e-05
Identities = 28/66 (42%), Positives = 40/66 (60%)
Frame = +1
Query: 52 GKRAPIRKKRKYELGRPAANTRLGPRRIHSVRSRGGNTEYRALRLDTGNFSWGSECSTRK 231
G ++ RKKR + GR +NT++G R + +R RGG + RAL L GNFS+ S T K
Sbjct: 16 GLKSCWRKKRNHAKGRQPSNTKIGRRCVVKLRVRGGGVKTRALFLSYGNFSFVSIQRTFK 75
Query: 232 TRIIDV 249
+I+ V
Sbjct: 76 AKILSV 81
>UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitozoon
cuniculi|Rep: Ribosomal protein S8 - Encephalitozoon
cuniculi
Length = 173
Score = 56.0 bits (129), Expect = 8e-07
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Frame = +1
Query: 52 GKRAPI-RKKRKYELGRPAANTRLGPRRIHSVRSRGGNTEYRALRLDTGNFSWGSECSTR 228
G +A I RKKR G ++T++G R++ VR RGGN +Y+ALRLD G+F + + R
Sbjct: 15 GAKAVISRKKRNNRAGSQPSSTKIGERKVTPVRVRGGNRKYKALRLDMGHFKFITTGKFR 74
Query: 229 KTRIIDVV 252
+++ VV
Sbjct: 75 MAKLLQVV 82
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +2
Query: 509 GRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSK 619
G L A + SRPGQ G A G++L+G EL+FY K K
Sbjct: 131 GHLYAIITSRPGQVGMAQGHVLQGDELKFYADKFNKK 167
Score = 34.7 bits (76), Expect = 2.1
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +3
Query: 261 SNNELVRTKTLVKNAIVVVDATPFR 335
S+NELVRT TL K+++V + A PF+
Sbjct: 86 SSNELVRTNTLTKSSVVKISAEPFK 110
>UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5;
Archaea|Rep: 30S ribosomal protein S8e - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 125
Score = 47.6 bits (108), Expect = 3e-04
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = +1
Query: 43 PPAGKRAPIRKKRKYELGRPAANTRLGPRRIHSVRSRGGNTEYRALRLDTGNFSWGSECS 222
P G+ + K++ E+GR A T +G R VR+ GGN + RALRL+ S +
Sbjct: 11 PSGGRYHTSQGKKRTEIGRAPAETHIGEERRRIVRTFGGNQKVRALRLEYATVSNPATGE 70
Query: 223 TRKTRI 240
T+KT+I
Sbjct: 71 TKKTKI 76
>UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_54, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 110
Score = 46.8 bits (106), Expect = 5e-04
Identities = 32/81 (39%), Positives = 45/81 (55%)
Frame = +3
Query: 270 ELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARK 449
ELVRT+TLVKNAI+ Q Y HY L +G KK A T ++ +++ RK
Sbjct: 31 ELVRTQTLVKNAII--------QRYLQHYGLDIGCKKKASTTPRKK----ERKGNHVVRK 78
Query: 450 YLARQRLAKVEGALEEQFHTG 512
RQ+ K++ +EEQF +G
Sbjct: 79 LEKRQQDHKLDPHIEEQFGSG 99
>UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella
natans|Rep: Ribosomal protein S8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 176
Score = 44.8 bits (101), Expect = 0.002
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +1
Query: 52 GKRAPIRKKRKYELGRPAANTRLGPRR-IHSVRSRGGNTEYRALRLDTGNFSWGSECSTR 228
GK+ I KK+ + G NT L I R RGGN +++A+ L G+F W + ++
Sbjct: 9 GKKKKISKKKNHSKGNNPTNTVLRRANFIKMTRVRGGNFKFKAISLGKGSFQWKTMQLSK 68
Query: 229 KTRIIDVV*MHLTMNWCVQRPLSR 300
++I+ V+ + +R LS+
Sbjct: 69 NSKILSVLYNQANLKLVQKRNLSK 92
>UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Thermoplasma acidophilum
Length = 127
Score = 44.4 bits (100), Expect = 0.003
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +1
Query: 70 RKKRKYELGRPAANTRLGPRRIHSV-RSRGGNTEYRALRLDTGNFSWGSECSTRKTRIID 246
RKKR++ELGR T+LG + V R+ GGNT+ +T N SE +K +II
Sbjct: 21 RKKRRFELGREPTLTKLGTKTERKVIRTMGGNTKVILFTAETANVYDASEKKIKKAKIIT 80
Query: 247 V 249
V
Sbjct: 81 V 81
>UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6;
Archaea|Rep: 30S ribosomal protein S8e - Pyrococcus
horikoshii
Length = 127
Score = 39.1 bits (87), Expect = 0.097
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 43 PPAGKRAPIRKKRKYELGRPAANTRLGPR-RIHSVRSRGGNTEYRALRLDTGNFSWGSEC 219
P G+ RKKRK ELGR +NTR+ + + +R+ GGN + R N +
Sbjct: 12 PSGGRIVLARKKRKRELGREPSNTRVAEQDKRKIIRTYGGNRKVRLTAAAYANV-FDKSG 70
Query: 220 STRKTRIIDVV 252
RK RII V+
Sbjct: 71 KGRKVRIIRVL 81
>UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S8e -
Methanopyrus kandleri
Length = 133
Score = 39.1 bits (87), Expect = 0.097
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 43 PPAGKRAPIRKKRKYELGRPAANTRLG-PRRIHSVRSRGGNTE 168
P G+ P RKKRK+E+G P T +G R++ R GGN +
Sbjct: 12 PTGGRIRPHRKKRKFEMGNPPTETLVGEERKLKERRGMGGNVK 54
>UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4;
Archaea|Rep: 30S ribosomal protein S8e - Sulfolobus
solfataricus
Length = 133
Score = 35.5 bits (78), Expect = 1.2
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 52 GKRAPIRKKRKYELGRPAANTRLGPRRIH-SVRSRGGNTEYRALRLDTGNFSWGSECSTR 228
G + R KRKYE+G P T L I R+ GGN + R T N + + +
Sbjct: 15 GLKGKHRDKRKYEIGNPPTFTTLSAEDIRIKDRTLGGNFKVRLKYTTTANVLDPATNTAK 74
Query: 229 KTRIIDVV 252
K +I++++
Sbjct: 75 KVKILEIL 82
>UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3;
Desulfurococcales|Rep: 30S ribosomal protein S8e -
Aeropyrum pernix
Length = 136
Score = 35.1 bits (77), Expect = 1.6
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +1
Query: 43 PPAGKRAPIRK-KRKYELGRPAANTRLGPRRIHS---VRSRGGNTEYRALRLDTGNFSWG 210
P GKR K KRKY GRP T L VR+RGG+ + +A ++ S
Sbjct: 12 PSGGKRRYYYKVKRKYAAGRPPTYTTLSAAEEEERKPVRARGGSYKIKAKKVAFAVVSNP 71
Query: 211 SECSTRKTRIIDVV 252
RK RI+ +V
Sbjct: 72 KTGEARKARILRIV 85
>UniRef50_Q4V8R6 Cluster: Zgc:114190; n=2; Danio rerio|Rep:
Zgc:114190 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 719
Score = 33.9 bits (74), Expect = 3.7
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +2
Query: 98 VPLQTPGSVLGVSTPFVHVVEILSTVRCVWTPVTSLGDRNVQLAKPVSLMLCKC 259
V Q+P +VLG + EI T CV T D +V+ +PV L KC
Sbjct: 314 VEAQSPKAVLGAPETETRITEIQVTEECVETLAEETQDSSVKEVEPVQSKLYKC 367
>UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:
CG5899-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 844
Score = 33.9 bits (74), Expect = 3.7
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 258 ASNNELVRTKTLV-KNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRS 431
AS EL KTL K A+ ++D PF W + L R G L A+E +INK+ +
Sbjct: 194 ASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIRMSGDLLNYAQE-LINKQNT 251
>UniRef50_A4B0L3 Cluster: Putative oxidoreductase subunit; n=1;
Alteromonas macleodii 'Deep ecotype'|Rep: Putative
oxidoreductase subunit - Alteromonas macleodii 'Deep
ecotype'
Length = 341
Score = 33.5 bits (73), Expect = 4.8
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -3
Query: 187 PDAAHGTQYFHHVNERSGYA 128
P + HGTQY+H V +RS YA
Sbjct: 218 PKSRHGTQYYHKVRDRSSYA 237
>UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 33.1 bits (72), Expect = 6.4
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 393 TEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQF 503
T EE I+NKK S+K +KY ++ AK+ L E F
Sbjct: 105 TPEEEEILNKKHSKKIQKKYEEWKKKAKISLLLREHF 141
>UniRef50_Q2W531 Cluster: TPR repeat; n=3; Magnetospirillum|Rep: TPR
repeat - Magnetospirillum magneticum (strain AMB-1 /
ATCC 700264)
Length = 556
Score = 33.1 bits (72), Expect = 6.4
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1
Query: 55 KRAPIRKKRKYELGRPAANTRLGPRRIHSVRSR 153
+RAP K YE R AA TRL P + ++R R
Sbjct: 272 ERAPANLKANYEKERDAAGTRLSPAELEALRGR 304
>UniRef50_A7D873 Cluster: Exodeoxyribonuclease III Xth; n=2;
Methylobacterium extorquens PA1|Rep:
Exodeoxyribonuclease III Xth - Methylobacterium
extorquens PA1
Length = 344
Score = 33.1 bits (72), Expect = 6.4
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +1
Query: 22 ITGISEGPPAGKRAPIRKKRKYELGRPAANTRLGPRRIHSVRSRGGNTEYRALRL-DTGN 198
+ G+ G AG+R P+R++ + E RP A+ R P H+ R+R G R L + +
Sbjct: 2 VDGLCRGL-AGRRGPLRRRGRRERLRPLADDR-RPALRHAARARPGGGGGRGLTVCEARR 59
Query: 199 FSWGSECSTRKTRIIDV 249
F + S S ++ I V
Sbjct: 60 FRYRSGSSRHASQAIPV 76
>UniRef50_Q8TN82 Cluster: Predicted protein; n=1; Methanosarcina
acetivorans|Rep: Predicted protein - Methanosarcina
acetivorans
Length = 90
Score = 33.1 bits (72), Expect = 6.4
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 342 YESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTA-RKYLARQRLAKVEGALEE 497
Y + +TL R + A EA E ++ K +K A K LA+ L K+EG LEE
Sbjct: 31 YRNIWTLNGSRNRSATSKEACEKLLAKNCLRKIACEKLLAKNCLRKIEGLLEE 83
>UniRef50_Q8ZTB8 Cluster: 30S ribosomal protein S8e; n=6;
Archaea|Rep: 30S ribosomal protein S8e - Pyrobaculum
aerophilum
Length = 131
Score = 33.1 bits (72), Expect = 6.4
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +1
Query: 43 PPAGKRAPIRKKRKYEL-GRPAANTRLGPRRIHSV-RSRGGNTEYRALRLDTGNFSWGSE 216
P GK+ +RK +K L G P +LG V R RGGN + R N E
Sbjct: 15 PSGGKKRKVRKTKKKALGGGPPQIPKLGENDTRIVERVRGGNLKVRLREAKFANVYIPKE 74
Query: 217 CSTRKTRIIDVV 252
+ K +II ++
Sbjct: 75 RKSVKAKIISII 86
>UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium
japonicum|Rep: Blr7583 protein - Bradyrhizobium
japonicum
Length = 261
Score = 32.7 bits (71), Expect = 8.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 306 IVVVDATPFRQWYESHYTLPLGRKK 380
++ +D PFR+W + TLPLG K
Sbjct: 22 VIAIDGDPFREWQRTSRTLPLGEVK 46
>UniRef50_Q5CW62 Cluster: FH2 domain containing protein; n=2;
Cryptosporidium|Rep: FH2 domain containing protein -
Cryptosporidium parvum Iowa II
Length = 967
Score = 32.7 bits (71), Expect = 8.4
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = -2
Query: 326 SCIYYNNCILDKGLCTHQFIVRCIYTTSMIRVLRVEHSDPQ 204
S I Y N ++G C H F C + S I LR+ HSDPQ
Sbjct: 858 SIIKYPNYFNNQGFCEHNFAEICDNSNS-IYDLRIIHSDPQ 897
>UniRef50_A7F1W3 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 622
Score = 32.7 bits (71), Expect = 8.4
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -2
Query: 296 DKGLCTHQFIVRCIYTTSMIRVLRVEHSDPQEKLPVS 186
D GL + + IY T I +R EH DP++ LP S
Sbjct: 302 DLGLADYNLLFDTIYATPPIARVRSEHEDPRDNLPDS 338
>UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 620
Score = 32.7 bits (71), Expect = 8.4
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 321 ATPFRQWYESHYTLPLGRKKGAKLTEAE 404
ATPF Q + +HY L RKKG K+ E E
Sbjct: 374 ATPFYQTFLAHYIWQLKRKKGKKMKEDE 401
>UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Uncultured methanogenic archaeon RC-I
Length = 125
Score = 32.7 bits (71), Expect = 8.4
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +1
Query: 70 RKKRKYELGRPAANTRLGPRRIHSVRSRGGNTEYRALRLDTGNFSWGSECSTRKTRIIDV 249
R KRK+ELGR +G +++ + G ++ R L+ D N + T+K ++ V
Sbjct: 20 RSKRKFELGRDFTIPVIGAQKLKVLNVTGNGSKVRVLKSDVVNVTDPKTGKTQKVKMTTV 79
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,558,628
Number of Sequences: 1657284
Number of extensions: 13534909
Number of successful extensions: 39375
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39351
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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