Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120596.Seq
         (812 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    26   0.41 
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    25   0.54 
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    25   0.54 
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    23   2.2  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    23   2.2  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    23   2.2  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   3.8  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 25.8 bits (54), Expect = 0.41
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 623 LNSCFISFSSSVWCTVGSVCSTYR 552
           ++SC   FSSS WC   +  S  R
Sbjct: 135 VSSCHQGFSSSTWCNYSAYSSASR 158


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 25.4 bits (53), Expect = 0.54
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 207 ENRVKHGDPLYLSPQTYYSTK*AL 278
           EN   +GDP Y+SP+ + +T  A+
Sbjct: 439 ENNHYNGDPNYISPEVFPNTNNAI 462


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 25.4 bits (53), Expect = 0.54
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 207 ENRVKHGDPLYLSPQTYYSTK*AL 278
           EN   +GDP Y+SP+ + +T  A+
Sbjct: 387 ENNHYNGDPNYISPEVFPNTNNAI 410


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 6/11 (54%), Positives = 11/11 (100%)
 Frame = -1

Query: 149 NTYCLFIIYIF 117
           +TYCLF++++F
Sbjct: 289 STYCLFLLFVF 299


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 6/11 (54%), Positives = 11/11 (100%)
 Frame = -1

Query: 149 NTYCLFIIYIF 117
           +TYCLF++++F
Sbjct: 289 STYCLFLLFVF 299


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 6/11 (54%), Positives = 11/11 (100%)
 Frame = -1

Query: 149 NTYCLFIIYIF 117
           +TYCLF++++F
Sbjct: 289 STYCLFLLFVF 299


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 420 PSRAISMRPRRCCTPKGICS 479
           P+RA+   P +C  P   CS
Sbjct: 149 PNRALDCDPTQCVLPDCFCS 168


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,579
Number of Sequences: 336
Number of extensions: 4025
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)