Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120596.Seq
         (812 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023782-1|AAZ41791.1|  779|Drosophila melanogaster LD11946p pro...    33   0.35 
AY113258-1|AAM29263.1|  477|Drosophila melanogaster AT15039p pro...    29   5.7  
AE014297-248|AAF52030.1|  477|Drosophila melanogaster CG12147-PA...    29   5.7  
AY069427-1|AAL39572.1|  417|Drosophila melanogaster LD13649p pro...    29   7.6  
AE013599-2262|AAM68519.1|  417|Drosophila melanogaster CG7997-PB...    29   7.6  
AE013599-2261|AAF58008.2|  417|Drosophila melanogaster CG7997-PA...    29   7.6  
AL031863-2|CAA21317.1|  161|Drosophila melanogaster EG:EG0003.8 ...    29   10.0 
AE014296-3188|AAF49130.1| 1174|Drosophila melanogaster CG9392-PA...    29   10.0 

>BT023782-1|AAZ41791.1|  779|Drosophila melanogaster LD11946p
           protein.
          Length = 779

 Score = 33.5 bits (73), Expect = 0.35
 Identities = 21/52 (40%), Positives = 24/52 (46%)
 Frame = -1

Query: 446 WPHRNGPRRERN*TLPSLGRLGAGSTPTRCTGATRVRKTNFAAPPRCASWSA 291
           WPHR   R        S  R    S+ TRC  ATR  +T  +APPR   W A
Sbjct: 3   WPHRTSSRAAPA-RRRSPSRTLLSSSSTRCCSATR--RTMASAPPRIRRWIA 51


>AY113258-1|AAM29263.1|  477|Drosophila melanogaster AT15039p
           protein.
          Length = 477

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = -3

Query: 705 ALGQARLERALDVFEIRAVDLAAVAVRSQLLFHQLFEQRVVHGGLGLQHVPHLVVVGA 532
           + G+      L   E  A+ L +  V+  LL  +     ++ GGLG+ HV H    GA
Sbjct: 78  SFGELFQAEGLKYHEKVAIKLESSTVKHPLLPREARIYGILQGGLGIPHVKHYATEGA 135


>AE014297-248|AAF52030.1|  477|Drosophila melanogaster CG12147-PA
           protein.
          Length = 477

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = -3

Query: 705 ALGQARLERALDVFEIRAVDLAAVAVRSQLLFHQLFEQRVVHGGLGLQHVPHLVVVGA 532
           + G+      L   E  A+ L +  V+  LL  +     ++ GGLG+ HV H    GA
Sbjct: 78  SFGELFQAEGLKYHEKVAIKLESSTVKHPLLPREARIYGILQGGLGIPHVKHYATEGA 135


>AY069427-1|AAL39572.1|  417|Drosophila melanogaster LD13649p
           protein.
          Length = 417

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 10/35 (28%), Positives = 22/35 (62%)
 Frame = -3

Query: 582 HGGLGLQHVPHLVVVGAAAIQRNQSRVKFVVWPIL 478
           HGG G  + P ++++G   +  +QS+++  +W I+
Sbjct: 249 HGGPGHWNDPDMLLLGNYGLSYDQSKLQMAIWAIM 283


>AE013599-2262|AAM68519.1|  417|Drosophila melanogaster CG7997-PB,
           isoform B protein.
          Length = 417

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 10/35 (28%), Positives = 22/35 (62%)
 Frame = -3

Query: 582 HGGLGLQHVPHLVVVGAAAIQRNQSRVKFVVWPIL 478
           HGG G  + P ++++G   +  +QS+++  +W I+
Sbjct: 249 HGGPGHWNDPDMLLLGNYGLSYDQSKLQMAIWAIM 283


>AE013599-2261|AAF58008.2|  417|Drosophila melanogaster CG7997-PA,
           isoform A protein.
          Length = 417

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 10/35 (28%), Positives = 22/35 (62%)
 Frame = -3

Query: 582 HGGLGLQHVPHLVVVGAAAIQRNQSRVKFVVWPIL 478
           HGG G  + P ++++G   +  +QS+++  +W I+
Sbjct: 249 HGGPGHWNDPDMLLLGNYGLSYDQSKLQMAIWAIM 283


>AL031863-2|CAA21317.1|  161|Drosophila melanogaster EG:EG0003.8
           protein.
          Length = 161

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 15/62 (24%), Positives = 30/62 (48%)
 Frame = +1

Query: 493 YKLDAGLVSLNCGRADDDQMRYVLQTEPTVHHTLLEKLMKQELRPYRNSGEVYCTDFEHI 672
           Y +DAG +++N    D ++       +P     L++  MK+  +   + GE+ C D+  I
Sbjct: 69  YWVDAGKLTVNGEHPDSEKAFINCANDPHCAADLVQNYMKKFNQDCNDDGEMDCHDYARI 128

Query: 673 KR 678
            +
Sbjct: 129 HK 130


>AE014296-3188|AAF49130.1| 1174|Drosophila melanogaster CG9392-PA
           protein.
          Length = 1174

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 97  LATNLTGLLVAEHVSERELVLAEFELPD 14
           LA+NL+G+   +  S RELV+   E PD
Sbjct: 276 LASNLSGISPRDEFSIRELVVVRLETPD 303


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,129,507
Number of Sequences: 53049
Number of extensions: 748869
Number of successful extensions: 1830
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1830
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3818998872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)