Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120594.Seq
         (772 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2275|AAF53240.2| 2171|Drosophila melanogaster CG9932-PA...    31   1.7  
AY061495-1|AAL29043.1|  592|Drosophila melanogaster LD45751p pro...    29   5.3  
AL021728-6|CAA16814.1|  591|Drosophila melanogaster EG:95B7.6 pr...    29   5.3  
AF170448-1|AAD50986.1|  591|Drosophila melanogaster zeste-white ...    29   5.3  
AE014298-457|AAF45819.2|  592|Drosophila melanogaster CG2711-PA ...    29   5.3  

>AE014134-2275|AAF53240.2| 2171|Drosophila melanogaster CG9932-PA
            protein.
          Length = 2171

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = +3

Query: 285  ITSNLNRRIKQH-SNKQGAKCLRNATNLRLVY--HSARRTTTKPPPAWNTILSVNAASIS 455
            +TS  + R   H SN      + N   L  VY   S   TTT PPP  N++   NA+ + 
Sbjct: 1209 LTSPRSARNGNHPSNANSNSVVGNGLRLDAVYVASSTNNTTTPPPPPTNSVSKPNASPLP 1268

Query: 456  NCVSSKP 476
               +  P
Sbjct: 1269 VTTTPTP 1275


>AY061495-1|AAL29043.1|  592|Drosophila melanogaster LD45751p
           protein.
          Length = 592

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
 Frame = +3

Query: 240 VRVHSRQDNGKLYTGITSNLNRRIKQHSNKQGAKC----LRNATNLRLVYHSARRTTTKP 407
           V+ H     G  +T  TSNLN  ++ HS ++  KC        T  RL  H        P
Sbjct: 470 VKAHKCDVCGHAFT-FTSNLNAHVRLHSGEKPFKCEVCVKAFPTKKRLASHMRVHNKESP 528

Query: 408 PPAWNTILSVNAAS 449
             A   + S+N  S
Sbjct: 529 VTATVAVQSINPPS 542


>AL021728-6|CAA16814.1|  591|Drosophila melanogaster EG:95B7.6
           protein.
          Length = 591

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
 Frame = +3

Query: 240 VRVHSRQDNGKLYTGITSNLNRRIKQHSNKQGAKC----LRNATNLRLVYHSARRTTTKP 407
           V+ H     G  +T  TSNLN  ++ HS ++  KC        T  RL  H        P
Sbjct: 469 VKAHKCDVCGHAFT-FTSNLNAHVRLHSGEKPFKCEVCVKAFPTKKRLASHMRVHNKESP 527

Query: 408 PPAWNTILSVNAAS 449
             A   + S+N  S
Sbjct: 528 VTATVAVQSINPPS 541


>AF170448-1|AAD50986.1|  591|Drosophila melanogaster zeste-white 5
           protein.
          Length = 591

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
 Frame = +3

Query: 240 VRVHSRQDNGKLYTGITSNLNRRIKQHSNKQGAKC----LRNATNLRLVYHSARRTTTKP 407
           V+ H     G  +T  TSNLN  ++ HS ++  KC        T  RL  H        P
Sbjct: 469 VKAHKCDVCGHAFT-FTSNLNAHVRLHSGEKPFKCEVCVKAFPTKKRLASHMRVHNKESP 527

Query: 408 PPAWNTILSVNAAS 449
             A   + S+N  S
Sbjct: 528 VTATVAVQSINPPS 541


>AE014298-457|AAF45819.2|  592|Drosophila melanogaster CG2711-PA
           protein.
          Length = 592

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
 Frame = +3

Query: 240 VRVHSRQDNGKLYTGITSNLNRRIKQHSNKQGAKC----LRNATNLRLVYHSARRTTTKP 407
           V+ H     G  +T  TSNLN  ++ HS ++  KC        T  RL  H        P
Sbjct: 470 VKAHKCDVCGHAFT-FTSNLNAHVRLHSGEKPFKCEVCVKAFPTKKRLASHMRVHNKESP 528

Query: 408 PPAWNTILSVNAAS 449
             A   + S+N  S
Sbjct: 529 VTATVAVQSINPPS 542


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,809,698
Number of Sequences: 53049
Number of extensions: 682961
Number of successful extensions: 1987
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1987
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)