Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120593.Seq
(652 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41430 Cluster: Uncharacterized 36.6 kDa protein in EGT... 196 3e-49
UniRef50_O10298 Cluster: Uncharacterized 34.6 kDa protein; n=7; ... 83 6e-15
UniRef50_Q80LR8 Cluster: DNA binding protein; n=1; Adoxophyes ho... 57 4e-07
UniRef50_Q0N472 Cluster: DNA binding protein; n=1; Clanis biline... 54 4e-06
UniRef50_A1YJB7 Cluster: Single-stranded DNA binding protein; n=... 50 6e-05
UniRef50_Q77K94 Cluster: Dbp; n=3; Nucleopolyhedrovirus|Rep: Dbp... 49 1e-04
UniRef50_Q9YMS7 Cluster: LdOrf-47; ssDNA binding protein; n=1; L... 46 8e-04
UniRef50_Q8QL79 Cluster: DNA-binding protein DBP; n=2; Nucleopol... 42 0.017
UniRef50_Q91EX4 Cluster: ORF81 DBP; n=3; Granulovirus|Rep: ORF81... 41 0.022
UniRef50_Q9IK76 Cluster: SsDNA binding protein; n=1; Spodoptera ... 36 0.64
UniRef50_Q1H4V1 Cluster: Sensor protein; n=1; Methylobacillus fl... 34 3.4
UniRef50_A7P4W1 Cluster: Chromosome chr4 scaffold_6, whole genom... 33 7.8
UniRef50_A2F5V0 Cluster: Putative uncharacterized protein; n=1; ... 33 7.8
>UniRef50_P41430 Cluster: Uncharacterized 36.6 kDa protein in
EGT-IAP1 intergenic region; n=5;
Nucleopolyhedrovirus|Rep: Uncharacterized 36.6 kDa
protein in EGT-IAP1 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 316
Score = 196 bits (479), Expect = 3e-49
Identities = 85/89 (95%), Positives = 87/89 (97%)
Frame = +3
Query: 255 GNFSILNCSCFEGRFLKNEFCRLANLNSLHEWEDKLYPEPDKNIVVLEPANGKTTYTIGP 434
GNFSILNCSCFEGRFLKNEFCRL+NLNSLHEWEDKLYPEPDKNIVVLEPANGKTTYTIGP
Sbjct: 81 GNFSILNCSCFEGRFLKNEFCRLSNLNSLHEWEDKLYPEPDKNIVVLEPANGKTTYTIGP 140
Query: 435 RVQGKPCGFWFSDFGTIKRAKSNFGSFLA 521
RVQGKPCGFWFSDFGTIKRAKSNFG F +
Sbjct: 141 RVQGKPCGFWFSDFGTIKRAKSNFGQFFS 169
Score = 149 bits (361), Expect = 6e-35
Identities = 73/86 (84%), Positives = 75/86 (87%), Gaps = 2/86 (2%)
Frame = +1
Query: 13 MATKRKIGD--SSSDDNQPKRERVESGEDQQLVPYNNNNGAAFNVKHDETGVMCYFTPSS 186
MATKRKIGD SSSDDNQPKRER E GEDQQLVPYN+ AFNVKHDETGVMCYFTPSS
Sbjct: 1 MATKRKIGDGYSSSDDNQPKRERSEGGEDQQLVPYNSG---AFNVKHDETGVMCYFTPSS 57
Query: 187 VQLEPRELTKMLWQEQMAINVKRATF 264
+QLEP ELTKMLWQEQMAINVKR F
Sbjct: 58 IQLEPHELTKMLWQEQMAINVKRGNF 83
Score = 110 bits (265), Expect = 2e-23
Identities = 48/56 (85%), Positives = 50/56 (89%)
Frame = +2
Query: 485 KTCQKQLWQFFSIQYGDIHKHNNIFGNILQRHLQSDFPLKMEPNVCIHLPDKNKTS 652
K + QFFSIQYGDIHKHNNIFGNILQ+HLQSDFPLKMEPNVCIHLPDKNKTS
Sbjct: 158 KRAKSNFGQFFSIQYGDIHKHNNIFGNILQKHLQSDFPLKMEPNVCIHLPDKNKTS 213
>UniRef50_O10298 Cluster: Uncharacterized 34.6 kDa protein; n=7;
Nucleopolyhedrovirus|Rep: Uncharacterized 34.6 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 300
Score = 83.0 bits (196), Expect = 6e-15
Identities = 40/92 (43%), Positives = 63/92 (68%)
Frame = +3
Query: 246 CETGNFSILNCSCFEGRFLKNEFCRLANLNSLHEWEDKLYPEPDKNIVVLEPANGKTTYT 425
C+ +FS +N + ++LK++F L NL++ +EW + PE DK + ++E A GK TYT
Sbjct: 67 CQALDFSAINFHYGDLQYLKDKFTELQNLSNYYEWRKQERPE-DK-VCIMEAAVGKCTYT 124
Query: 426 IGPRVQGKPCGFWFSDFGTIKRAKSNFGSFLA 521
IG RV+G+P GF ++FG++ R+KS FG FL+
Sbjct: 125 IGLRVKGRPNGFAIAEFGSVHRSKSTFGQFLS 156
Score = 57.6 bits (133), Expect = 2e-07
Identities = 20/45 (44%), Positives = 34/45 (75%)
Frame = +2
Query: 509 QFFSIQYGDIHKHNNIFGNILQRHLQSDFPLKMEPNVCIHLPDKN 643
QF S + IH+HN++FG I+ + + ++PLK+E +VC+HLP+K+
Sbjct: 153 QFLSTTWSAIHEHNSVFGKIMDSYYKHEYPLKLESSVCVHLPEKD 197
>UniRef50_Q80LR8 Cluster: DNA binding protein; n=1; Adoxophyes
honmai NPV|Rep: DNA binding protein - Adoxophyes honmai
nucleopolyhedrovirus
Length = 322
Score = 56.8 bits (131), Expect = 4e-07
Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 6/116 (5%)
Frame = +3
Query: 258 NFSILNC-SCFEGRFLKNEFCRLANLNSLHEWEDKLYPEPDKNIVVLEPANGKTTYTIGP 434
N S++NC + F LK + + ++E++LYPEP I V P K T+ +G
Sbjct: 86 NSSVVNCMTSFHQNQLKMALDFVNTTYNFAQYENELYPEPISKITVEAPKPPKLTFNVGY 145
Query: 435 RVQGKPCGFWFSDFGTIKRAKSNFGSFLAFNTETF-----TNTTIYLATFCKDTCK 587
V+G F+F D +KR KS FG FL + I F +D CK
Sbjct: 146 HVKGGAVPFYFFDTVILKRFKSAFGEFLTIKWSNIGRHSKVYSNIMSKYFSEDMCK 201
>UniRef50_Q0N472 Cluster: DNA binding protein; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: DNA binding protein -
Clanis bilineata nucleopolyhedrosis virus
Length = 318
Score = 53.6 bits (123), Expect = 4e-06
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Frame = +3
Query: 255 GNFSILNCSCFEGRFLKNEFCRLANLNSLHEWEDKLYPEPDKNIVVLEPANGKTTYTIGP 434
GN ++L+C G L N L +L EW D++ PEP IVV +P + Y +G
Sbjct: 75 GNTTLLHCDT-PGNDLVNLLASLKYKLNLDEWLDRMLPEPHAKIVVTKPVAPRVVYQVGF 133
Query: 435 RVQGKPCGFWFSDFGTIKRAKSNFGSFLAFNTETF-TNTTIY 557
V G F+F D ++R G F + T+ +Y
Sbjct: 134 HVHGGKVPFYFFDTVYLRRYSGKHGEFFTARWSSMATHNAVY 175
Score = 35.5 bits (78), Expect = 1.1
Identities = 12/42 (28%), Positives = 27/42 (64%)
Frame = +2
Query: 509 QFFSIQYGDIHKHNNIFGNILQRHLQSDFPLKMEPNVCIHLP 634
+FF+ ++ + HN ++ NI++R+ D LKM+ ++ + +P
Sbjct: 159 EFFTARWSSMATHNAVYANIIKRYNSWDDQLKMQDSIIVRVP 200
>UniRef50_A1YJB7 Cluster: Single-stranded DNA binding protein; n=3;
Nucleopolyhedrovirus|Rep: Single-stranded DNA binding
protein - Spodoptera frugiperda nuclear polyhedrosis
virus (SfNPV)
Length = 331
Score = 49.6 bits (113), Expect = 6e-05
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +3
Query: 354 DKLYPEPDKNIVVLEPANGKTTYTIGPRVQGKPCGFWFSDFGTIKRAKSNFGSFLAFN 527
D+ PE K I++L+P + Y +G V+G F+F D+ +KR NFG FL+ +
Sbjct: 127 DEFEPEISKEIIILKPKPPRVVYNVGKVVRGGSKPFFFFDYAKVKRCVGNFGEFLSIS 184
>UniRef50_Q77K94 Cluster: Dbp; n=3; Nucleopolyhedrovirus|Rep: Dbp -
Helicoverpa armigera NPV
Length = 323
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/60 (41%), Positives = 33/60 (55%)
Frame = +3
Query: 336 SLHEWEDKLYPEPDKNIVVLEPANGKTTYTIGPRVQGKPCGFWFSDFGTIKRAKSNFGSF 515
SL W DKLYP+ + +V+ K TY IG V+G F+F D +KR KS +G F
Sbjct: 109 SLESWIDKLYPQVNDKVVIEPLKPPKLTYKIGVLVKGGMFHFYFFDMVKMKRYKSVYGEF 168
Score = 48.4 bits (110), Expect = 1e-04
Identities = 20/45 (44%), Positives = 33/45 (73%)
Frame = +2
Query: 509 QFFSIQYGDIHKHNNIFGNILQRHLQSDFPLKMEPNVCIHLPDKN 643
+FF I + ++H HN IFGNI++ HLQ + LK++ +V ++LP+ N
Sbjct: 167 EFFMITWPNMHVHNKIFGNIMKNHLQEE-NLKLQNSVLVNLPEDN 210
>UniRef50_Q9YMS7 Cluster: LdOrf-47; ssDNA binding protein; n=1;
Lymantria dispar MNPV|Rep: LdOrf-47; ssDNA binding
protein - Lymantria dispar multicapsid nuclear
polyhedrosis virus (LdMNPV)
Length = 257
Score = 46.0 bits (104), Expect = 8e-04
Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Frame = +3
Query: 255 GNFSILNCSCFEGRFLKNEFCRLANLNSLHEWEDKLYPEPDKNI----VVLEPANGKTTY 422
GNF+++ C + L N ++ + ++ ++ +LYP+ + + V+ +P + Y
Sbjct: 18 GNFTVVTCDS-PNKNLLNSLLKVQHKLNIGQYMQQLYPDVSEELAPKLVIRKPKPPRLVY 76
Query: 423 TIGPRVQGKPCGFWFSDFGTIKRAKSNFGSFLAFN-TETFTNTTIY 557
+G V G F+F D ++R S+FG F+ TE + +I+
Sbjct: 77 EVGMHVHGGKLPFYFVDTVVLRRCVSDFGEFMTARWTEMNAHNSIF 122
>UniRef50_Q8QL79 Cluster: DNA-binding protein DBP; n=2;
Nucleopolyhedrovirus|Rep: DNA-binding protein DBP -
Mamestra configurata NPV-A
Length = 328
Score = 41.5 bits (93), Expect = 0.017
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = +3
Query: 366 PEPDKNIVVLEPANGKTTYTIGPRVQGKPCGFWFSDFGTIKRAKSNFGSFLAFNTETFTN 545
P +NIV+ P + + Y +G +G F+F D+ + A+S FG++L+ N ++N
Sbjct: 120 PTVSQNIVITRPKSPRVVYQVGKLCKGGMIPFFFFDYVRVTAAESTFGNYLSLN---WSN 176
Query: 546 TTIYLATFCK 575
++ F K
Sbjct: 177 MYLHNEAFAK 186
>UniRef50_Q91EX4 Cluster: ORF81 DBP; n=3; Granulovirus|Rep: ORF81
DBP - Cydia pomonella granulosis virus (CpGV) (Cydia
pomonellagranulovirus)
Length = 290
Score = 41.1 bits (92), Expect = 0.022
Identities = 34/110 (30%), Positives = 48/110 (43%), Gaps = 9/110 (8%)
Frame = +3
Query: 267 ILNC--SCFEGRFLK-NEFCRLANLNS--LHEWEDKL--YPEPDKNIVVLEPANGKTTYT 425
+ NC S F L+ N++ RL +L+ +++ K Y E I +E + KT Y
Sbjct: 48 VFNCITSDFARNILQWNKYYRLEDLSKHIVYDAPTKSFKYDESKIQIYSIEKTDKKTQYM 107
Query: 426 IGPRVQGKP--CGFWFSDFGTIKRAKSNFGSFLAFNTETFTNTTIYLATF 569
IG + KP C FW D T+K K FG F N Y+ F
Sbjct: 108 IGLKTMSKPKLCSFW--DKATVKMCKGGFGEFHIINLNNEPTLINYVEQF 155
>UniRef50_Q9IK76 Cluster: SsDNA binding protein; n=1; Spodoptera
litura NPV|Rep: SsDNA binding protein - Spodoptera
litura multicapsid nucleopolyhedrovirus (SpltMNPV)
Length = 290
Score = 36.3 bits (80), Expect = 0.64
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 375 DKNIVVLEPANGK-TTYTIGPRVQGKPCGFWFSDFGTIKRAKSNFGSFL 518
+KN+ V+ P + TTYTIG V ++F D+ ++ KS +G F+
Sbjct: 100 EKNLGVMRPMHAMGTTYTIGKIVNNSLKKYYFFDYANVRICKSAYGHFM 148
>UniRef50_Q1H4V1 Cluster: Sensor protein; n=1; Methylobacillus
flagellatus KT|Rep: Sensor protein - Methylobacillus
flagellatus (strain KT / ATCC 51484 / DSM 6875)
Length = 531
Score = 33.9 bits (74), Expect = 3.4
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +3
Query: 156 GRNVLFYAVVRSIGATRVDKDVVAGANGD*CETGNFSILNCSCFEGRFLKNEFCRLANLN 335
GR LFYA V SIG + N D + + +L+ SCF +L + F + A+LN
Sbjct: 124 GRLALFYAAVASIGLLLEQSYQMLIWNEDFGDYSHAVMLSISCFATAWLAHSFSKRASLN 183
Query: 336 S 338
+
Sbjct: 184 A 184
>UniRef50_A7P4W1 Cluster: Chromosome chr4 scaffold_6, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr4 scaffold_6, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 570
Score = 32.7 bits (71), Expect = 7.8
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -1
Query: 370 SGYNLSSHSCKLFKLASRQNSFFKNLPSKQLQFSIEKLPVSH 245
SGY + + KLF +AS NLP K L +++EK+P S+
Sbjct: 416 SGYTIVTAVSKLFLVASIFLFIHGNLPEKILGYTVEKIPPSN 457
>UniRef50_A2F5V0 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 425
Score = 32.7 bits (71), Expect = 7.8
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = -3
Query: 644 CSYPANECTRLVPFSKENRFASV--FAKCCQIYCC--VCECLRIEC 519
C Y N CT V + K +F S + KCC +CC C+C + EC
Sbjct: 149 CCY--NCCTN-VTYHKIAKFYSKHHYGKCCHCHCCDGCCKCCKCEC 191
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 698,526,219
Number of Sequences: 1657284
Number of extensions: 15044127
Number of successful extensions: 49294
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 46416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49225
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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