Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120593.Seq
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    25   0.54 
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    25   0.54 
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    23   2.9  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   3.8  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   8.8  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   8.8  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 17/47 (36%), Positives = 21/47 (44%)
 Frame = -2

Query: 501 CFWHVLWFQSRKTKIRRACPALLDRWCT*SCRWPAPTPRYFYRARDT 361
           C W+ L  +S K   +R   AL    CT SC  P     +  RAR T
Sbjct: 295 CIWYWLDRESAKNVDQRIQKALFLFACTNSCMNPVVYGVFNIRARRT 341


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 17/47 (36%), Positives = 21/47 (44%)
 Frame = -2

Query: 501 CFWHVLWFQSRKTKIRRACPALLDRWCT*SCRWPAPTPRYFYRARDT 361
           C W+ L  +S K   +R   AL    CT SC  P     +  RAR T
Sbjct: 295 CIWYWLDRESAKNVDQRIQKALFLFACTNSCMNPVVYGVFNIRARRT 341


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -2

Query: 336 YSN*PVDKIRFSKICLRNNYNSVLKSCP 253
           Y N  VD+I  SK  L N  N +L+  P
Sbjct: 38  YDNVDVDRILHSKRLLLNYINCLLEKGP 65


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -2

Query: 357 CLPIRANYSN*PVDKIRFSKICLRNNYNSVL 265
           C      Y N  VD+I  S+  L+N +N ++
Sbjct: 16  CEQYTTKYDNINVDEILASERLLKNYFNCIM 46


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = +2

Query: 596 PLKMEPNVCIHL 631
           P  ++PN+C H+
Sbjct: 45  PKNIDPNICTHI 56


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 482 GSKVGKPKSAGL 447
           GSK GKP+SA L
Sbjct: 687 GSKPGKPRSAFL 698


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,945
Number of Sequences: 336
Number of extensions: 3986
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)