Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120593.Seq
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97014-1|AAB52425.1|  893|Caenorhabditis elegans Hypothetical pr...    31   0.54 
Z77670-1|CAB01247.1|  484|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z95619-3|CAB54269.1|  490|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AF043706-5|ABP57808.1|  536|Caenorhabditis elegans Hypothetical ...    28   5.0  
AF043706-3|ABP57807.1|  534|Caenorhabditis elegans Hypothetical ...    28   5.0  
Z82083-4|CAB04972.1|  371|Caenorhabditis elegans Hypothetical pr...    28   6.6  
Z81588-2|CAB04712.1|  379|Caenorhabditis elegans Hypothetical pr...    28   6.6  
U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domai...    28   6.6  
Z68760-10|CAL49442.1| 1427|Caenorhabditis elegans Hypothetical p...    27   8.7  
Z68760-9|CAJ80808.1| 1379|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z68760-8|CAA92996.1| 1398|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>U97014-1|AAB52425.1|  893|Caenorhabditis elegans Hypothetical
          protein T05E8.1 protein.
          Length = 893

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +1

Query: 22 KRKIGDSSSDDNQPKRERVESGEDQQ 99
          K K GDSSSDD+ P+R+R E   D +
Sbjct: 13 KFKRGDSSSDDSGPERDRDEDDSDNE 38


>Z77670-1|CAB01247.1|  484|Caenorhabditis elegans Hypothetical
           protein W05E10.1 protein.
          Length = 484

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +3

Query: 426 IGPRVQGKPCGFWFSDFGTIKRAKSNFGSFLAFNTETFTNTTIYLATF 569
           +GPR QG   G  F+ FG++ R  +   +   FN+  +T  ++ + TF
Sbjct: 403 LGPRQQGTMQGV-FAFFGSVGRCAAPLVTTFFFNSSGYTWVSVEMLTF 449


>Z95619-3|CAB54269.1|  490|Caenorhabditis elegans Hypothetical
           protein H21P03.3b protein.
          Length = 490

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +3

Query: 372 PDKNIVVLEPANGKTTYTIGPRVQGKPCGFWFSDFGTIKRAKSNFGS 512
           PD+N+ V    N   T  IGP+++  P      D G  ++A+++ G+
Sbjct: 25  PDQNVDVKVQENNVVTTKIGPKLETIPAAKMQDDNGDEEKAENSEGA 71


>AF043706-5|ABP57808.1|  536|Caenorhabditis elegans Hypothetical
           protein ZC123.4b protein.
          Length = 536

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = -1

Query: 376 SGSGYNLSSHSCKLFKLASRQNSFFKNLPSKQLQFSIEKLPVSH*SPFAPATTSLST 206
           SGSG     H+  +F   SRQ+    N PS+    ++  +P++  SP  P   S +T
Sbjct: 125 SGSGSTPEHHNKNIFSFLSRQSRSRSNNPSE----TMSTVPLNKNSPSMPPPPSSNT 177


>AF043706-3|ABP57807.1|  534|Caenorhabditis elegans Hypothetical
           protein ZC123.4a protein.
          Length = 534

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = -1

Query: 376 SGSGYNLSSHSCKLFKLASRQNSFFKNLPSKQLQFSIEKLPVSH*SPFAPATTSLST 206
           SGSG     H+  +F   SRQ+    N PS+    ++  +P++  SP  P   S +T
Sbjct: 125 SGSGSTPEHHNKNIFSFLSRQSRSRSNNPSE----TMSTVPLNKNSPSMPPPPSSNT 177


>Z82083-4|CAB04972.1|  371|Caenorhabditis elegans Hypothetical
           protein ZK1010.6 protein.
          Length = 371

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 23/72 (31%), Positives = 28/72 (38%)
 Frame = -2

Query: 465 TKIRRACPALLDRWCT*SCRWPAPTPRYFYRARDTTCLPIRANYSN*PVDKIRFSKICLR 286
           T  RR  P   +R C+    + AP  RY +  RDT  L I   Y     D I   + C  
Sbjct: 117 TVARRIRPYYTNRKCS---PYEAPPFRYTFCTRDTNRLAILGMYMADGSDNIDTERYCGS 173

Query: 285 NNYNSVLKSCPF 250
           N   S    C F
Sbjct: 174 NRDCSSTSVCVF 185


>Z81588-2|CAB04712.1|  379|Caenorhabditis elegans Hypothetical
           protein T07D10.2 protein.
          Length = 379

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 513 NCQSCFWHVLWFQSRKTKIRRACP 442
           N  SC    LWF   + +++RACP
Sbjct: 331 NLNSCMNPWLWFHFNRKQLKRACP 354


>U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domain
           protein protein 1 protein.
          Length = 709

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 16/65 (24%), Positives = 31/65 (47%)
 Frame = +2

Query: 413 DYVHHRSKSAGQALRILVFRLWNHKTCQKQLWQFFSIQYGDIHKHNNIFGNILQRHLQSD 592
           D +H R     Q++   + RL+N      QLW  ++I   D   H   FG +  +++  +
Sbjct: 268 DLLHRRRLQTLQSVDEGIERLFNLLRELNQLWNTYAIYTSDHGYHLGQFGLLKGKNMPYE 327

Query: 593 FPLKM 607
           F +++
Sbjct: 328 FDIRV 332


>Z68760-10|CAL49442.1| 1427|Caenorhabditis elegans Hypothetical
            protein F36H1.2c protein.
          Length = 1427

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
 Frame = -1

Query: 394  NTTIFLSGSGYNLSSH---SCKLFKLASRQNSFFKNLPSKQLQFSIEKLPVSH*SPFAPA 224
            N  + LS   Y L  H      L +L     +F   L SK +  S E+L V H   F P 
Sbjct: 1004 NNQLLLSEVYYQLKDHIPAQDDLMQLDRNLENFEGFLDSKGIP-SAERLTVGHVKKFVPC 1062

Query: 223  TTSL 212
            T+SL
Sbjct: 1063 TSSL 1066


>Z68760-9|CAJ80808.1| 1379|Caenorhabditis elegans Hypothetical protein
            F36H1.2b protein.
          Length = 1379

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
 Frame = -1

Query: 394  NTTIFLSGSGYNLSSH---SCKLFKLASRQNSFFKNLPSKQLQFSIEKLPVSH*SPFAPA 224
            N  + LS   Y L  H      L +L     +F   L SK +  S E+L V H   F P 
Sbjct: 975  NNQLLLSEVYYQLKDHIPAQDDLMQLDRNLENFEGFLDSKGIP-SAERLTVGHVKKFVPC 1033

Query: 223  TTSL 212
            T+SL
Sbjct: 1034 TSSL 1037


>Z68760-8|CAA92996.1| 1398|Caenorhabditis elegans Hypothetical protein
            F36H1.2a protein.
          Length = 1398

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
 Frame = -1

Query: 394  NTTIFLSGSGYNLSSH---SCKLFKLASRQNSFFKNLPSKQLQFSIEKLPVSH*SPFAPA 224
            N  + LS   Y L  H      L +L     +F   L SK +  S E+L V H   F P 
Sbjct: 975  NNQLLLSEVYYQLKDHIPAQDDLMQLDRNLENFEGFLDSKGIP-SAERLTVGHVKKFVPC 1033

Query: 223  TTSL 212
            T+SL
Sbjct: 1034 TSSL 1037


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,390,028
Number of Sequences: 27780
Number of extensions: 377561
Number of successful extensions: 1182
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1178
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)