Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120591.Seq
         (857 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       25   3.9  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   5.1  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   5.1  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   9.0  

>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -2

Query: 142 HNDCYVAVCVLKPGFENG 89
           H DCY   C+   G E G
Sbjct: 86  HTDCYHPACITADGVERG 103


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +3

Query: 555  RKNYTHFAMVKLKCSLNTSNVEYL*YNRSVKLK 653
            R  YT   +++     N+SNV Y  YN   KLK
Sbjct: 1903 RYMYTPEGLLRFVVQQNSSNVMYYTYNSVGKLK 1935


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +3

Query: 555  RKNYTHFAMVKLKCSLNTSNVEYL*YNRSVKLK 653
            R  YT   +++     N+SNV Y  YN   KLK
Sbjct: 1904 RYMYTPEGLLRFVVQQNSSNVMYYTYNSVGKLK 1936


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 11/55 (20%), Positives = 28/55 (50%)
 Frame = -3

Query: 480  NKIMNTQLTKPVLMMFNISGPIRSVTRKNNDLRDRIKSKVDEQFDQLEREYSDKI 316
            N + + Q  + ++ ++     ++   R+  D   R++    E ++Q++RE  DK+
Sbjct: 871  NNVFSIQEVEQLVTLWKNRNDVQKSFREKQDQLARMR----EHYEQIQRELKDKL 921


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 904,076
Number of Sequences: 2352
Number of extensions: 19085
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91372671
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)