Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120591.Seq
         (857 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067608-15|AAO38679.1|  470|Caenorhabditis elegans Hypothetical...    29   3.2  
AF067608-14|AAK95864.1|  551|Caenorhabditis elegans Hypothetical...    29   3.2  
AF000261-3|AAB52924.1|  464|Caenorhabditis elegans Hypothetical ...    29   4.2  
AF016683-6|AAY55869.1|  130|Caenorhabditis elegans Hypothetical ...    29   5.6  
Z49127-11|CAA88952.2|  452|Caenorhabditis elegans Hypothetical p...    28   9.8  
AL033535-4|CAA22134.2|  452|Caenorhabditis elegans Hypothetical ...    28   9.8  

>AF067608-15|AAO38679.1|  470|Caenorhabditis elegans Hypothetical
           protein B0511.14b protein.
          Length = 470

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = -3

Query: 426 SGPIRSVTRKNNDLRDRIKSKVDEQFDQLEREYSDKIDGFHDNIQYFKD 280
           +GP  S  R+++D   R K K DEQ D     Y +KI   + NIQ  ++
Sbjct: 310 TGPSTSSERRSSDPTIRKKGKTDEQLD----HYHEKIREKYRNIQKIQE 354


>AF067608-14|AAK95864.1|  551|Caenorhabditis elegans Hypothetical
           protein B0511.14a protein.
          Length = 551

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = -3

Query: 426 SGPIRSVTRKNNDLRDRIKSKVDEQFDQLEREYSDKIDGFHDNIQYFKD 280
           +GP  S  R+++D   R K K DEQ D     Y +KI   + NIQ  ++
Sbjct: 310 TGPSTSSERRSSDPTIRKKGKTDEQLD----HYHEKIREKYRNIQKIQE 354


>AF000261-3|AAB52924.1|  464|Caenorhabditis elegans Hypothetical
           protein F19B10.4 protein.
          Length = 464

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = -3

Query: 396 NNDLRDRIKSKVDEQFDQLEREYSDKIDGFHDNIQYFKDEHYSV 265
           N DL ++   ++ + FD+L  +  D +D   ++I++ K   YS+
Sbjct: 420 NEDLDEQSLEEIQKAFDELFEKVRDDLDDLENDIEWAKAISYSM 463


>AF016683-6|AAY55869.1|  130|Caenorhabditis elegans Hypothetical
           protein K09F6.11 protein.
          Length = 130

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 16/40 (40%), Positives = 18/40 (45%)
 Frame = +1

Query: 703 RSRYDARVIFGTIIALPEITTQSLMLQNVTAPLVYIKICP 822
           R+R+   V FG     PEIT  S    N   P V  K CP
Sbjct: 20  RNRHTEIVHFGLQPQDPEITENSFYYMNAHVPQVRAKTCP 59


>Z49127-11|CAA88952.2|  452|Caenorhabditis elegans Hypothetical
           protein F13D12.9 protein.
          Length = 452

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = -3

Query: 387 LRDRIKSKVDEQFDQLEREYSDKIDGFHDNIQYFKDEH-YSVSCQMAA 247
           L D +K   D  F +LE+    KID   D ++   D+H   + C   A
Sbjct: 202 LFDEVKPVTDVDFVELEKAQYKKIDRLIDQLELKADDHVLEIGCGWGA 249


>AL033535-4|CAA22134.2|  452|Caenorhabditis elegans Hypothetical
           protein F13D12.9 protein.
          Length = 452

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = -3

Query: 387 LRDRIKSKVDEQFDQLEREYSDKIDGFHDNIQYFKDEH-YSVSCQMAA 247
           L D +K   D  F +LE+    KID   D ++   D+H   + C   A
Sbjct: 202 LFDEVKPVTDVDFVELEKAQYKKIDRLIDQLELKADDHVLEIGCGWGA 249


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,500,013
Number of Sequences: 27780
Number of extensions: 418618
Number of successful extensions: 1166
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)