Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120589.Seq
         (773 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.38 
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   6.3  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   6.3  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   6.3  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   8.3  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   8.3  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   8.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 17/64 (26%), Positives = 27/64 (42%)
 Frame = -1

Query: 692 LTIFYILVFKFFVISFPYKTISFIFYNMKAMV*STDIQFVTKLISFECYLDKFAACFFAF 513
           L I+Y +V  FF++   Y   +FI + +  +       F    I F  +L  F   F  F
Sbjct: 131 LCIYYFVVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHL-LFCCAFIFF 189

Query: 512 TIQL 501
            + L
Sbjct: 190 NMHL 193



 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = -3

Query: 528 LFLCFYYSTNSLYLFMQSFFDRFGI 454
           + LC YY   +  +F   F+  F +
Sbjct: 294 ILLCIYYFCRAFIIFPTHFYCAFSL 318


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 510 YSTNSLYLFMQSFFDRFGIQSEIFSH 433
           YST SL++        +G  SEI  H
Sbjct: 249 YSTYSLFMMANITVAVYGFTSEIVDH 274


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 510 YSTNSLYLFMQSFFDRFGIQSEIFSH 433
           YST SL++        +G  SEI  H
Sbjct: 249 YSTYSLFMMANITVAVYGFTSEIVDH 274


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 510 YSTNSLYLFMQSFFDRFGIQSEIFSH 433
           YST SL++        +G  SEI  H
Sbjct: 249 YSTYSLFMMANITVAVYGFTSEIVDH 274


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 120 QHCTFIDDKRLSAK 161
           +HCT I +  +SAK
Sbjct: 179 EHCTLIGEDNISAK 192



 Score = 21.4 bits (43), Expect = 8.3
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -1

Query: 65  IHSLNEHLCHLNSPLNR 15
           +H LN  + HL++ +N+
Sbjct: 509 VHQLNTEVLHLSNAINK 525


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 384 NCWNKQLRRFQ 416
           NCWN +  R+Q
Sbjct: 113 NCWNGEASRYQ 123


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 384 NCWNKQLRRFQ 416
           NCWN +  R+Q
Sbjct: 113 NCWNGEASRYQ 123


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -3

Query: 405 LIACSNNSCSVLVQGFSSGLISAV 334
           ++ C+  +CS  +Q F +GLISA+
Sbjct: 931 ILVCA--TCSSDIQLFFAGLISAI 952


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -3

Query: 405 LIACSNNSCSVLVQGFSSGLISAV 334
           ++ C+  +CS  +Q F +GLISA+
Sbjct: 931 ILVCA--TCSSDIQLFFAGLISAI 952


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,263
Number of Sequences: 336
Number of extensions: 3612
Number of successful extensions: 24
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)