Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120589.Seq
(773 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_41667| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 1e-16
SB_31961| Best HMM Match : EGF (HMM E-Value=0) 44 1e-04
SB_12094| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.00041) 40 0.002
SB_51089| Best HMM Match : I-set (HMM E-Value=1.4e-38) 36 0.028
SB_13989| Best HMM Match : Myb_DNA-binding (HMM E-Value=9.6e-24) 33 0.26
SB_19291| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_51867| Best HMM Match : TP2 (HMM E-Value=9.2) 31 1.4
SB_19190| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 30 1.8
SB_55752| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_24349| Best HMM Match : Exo_endo_phos (HMM E-Value=0.001) 30 2.4
SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_9753| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_20304| Best HMM Match : Vicilin_N (HMM E-Value=4.6) 29 3.2
SB_44586| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_28606| Best HMM Match : PAN (HMM E-Value=4.6e-10) 28 7.3
SB_22310| Best HMM Match : Exo_endo_phos (HMM E-Value=0.12) 28 7.3
SB_12110| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_11070| Best HMM Match : Sugar_tr (HMM E-Value=0.00011) 28 9.6
SB_4314| Best HMM Match : 4_1_CTD (HMM E-Value=1.8) 28 9.6
SB_59088| Best HMM Match : AlaDh_PNT_N (HMM E-Value=4.3e-07) 28 9.6
SB_9820| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
>SB_41667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 84.2 bits (199), Expect = 1e-16
Identities = 36/75 (48%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Frame = +2
Query: 320 VNGTTTAEIKPE--EKPWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRY 493
V A PE EKPW+ +Q+LLE A++ P +TPERW+++++ +P R+KK+CMKRY
Sbjct: 527 VENAAAASAPPEKPEKPWSSDDQKLLEAALRAIPASTPERWDRVAESVPGRTKKECMKRY 586
Query: 494 KELVE**KQRNKPQT 538
KELVE K + QT
Sbjct: 587 KELVEMIKAKKAAQT 601
Score = 60.9 bits (141), Expect = 1e-09
Identities = 33/78 (42%), Positives = 49/78 (62%)
Frame = +3
Query: 21 EWTVEMTQMLIKAVNLFPAGTNQRWEVVANFLNQHCTFIDDKRLSAKEVLNKAKDLQSSD 200
EW+ E Q+L+KAVNLFPAGT RW V+A+++N H +KR K V+ K K L+ D
Sbjct: 422 EWSDEQLQLLVKAVNLFPAGTVSRWRVIADYVNDHAK-TGNKR-EPKHVIVKVKSLKKID 479
Query: 201 FSKSSLKKAANEEAFDQF 254
++ + N++AF +F
Sbjct: 480 PTQI---ENVNKKAFAKF 494
Score = 37.5 bits (83), Expect = 0.012
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +2
Query: 302 SKSDKLVNGTTTAEIKPE-EKPWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKD 478
SK + E+K E ++ W+ + +LL +A+ FP T RW I+D + + +K
Sbjct: 401 SKKIAALRAKKEMEVKEEADQEWSDEQLQLLVKAVNLFPAGTVSRWRVIADYVNDHAKTG 460
Query: 479 CMKRYKELV 505
+ K ++
Sbjct: 461 NKREPKHVI 469
>SB_31961| Best HMM Match : EGF (HMM E-Value=0)
Length = 2813
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/73 (30%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Frame = +2
Query: 263 KKKISNHVDNTGISKS-DKLVNGTTT--AEIKPEEKPWTKTEQELLEQAIKTFPVNTPER 433
++ + N + ++ I+++ ++ NGT E E W++ +Q+LLE A++ FP TP+R
Sbjct: 2741 QETLKNPLLDSAITRAQERRENGTEQHGEENSDEATTWSQAQQKLLEIALQQFPKTTPDR 2800
Query: 434 WEKISDCIPNRSK 472
W I+ +P +K
Sbjct: 2801 WTCIARAVPGMTK 2813
Score = 41.9 bits (94), Expect = 6e-04
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +2
Query: 314 KLVNGTTTAEIKPEEKPWTKTEQELLEQAIKTFPVNTPERWEKIS 448
++ +G++ A K + WT+ + LL +A+ FP TP+RWEKIS
Sbjct: 2648 EMTDGSSVA--KDDSNTWTEEDTSLLSRAMAKFPGGTPKRWEKIS 2690
Score = 35.9 bits (79), Expect = 0.036
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Frame = +3
Query: 24 WTVEMTQMLIKAVNLFPAGTNQRWEVVANFLNQHCTFIDDKRLSAKE---------VLNK 176
WT E T +L +A+ FP GT +RWE ++ L + + + K+ ++
Sbjct: 2663 WTEEDTSLLSRAMAKFPGGTPKRWEKISQELGKSLEMVTKQVKKIKQGYTVPGTANATSQ 2722
Query: 177 AKDLQSSDFSKSSLKKAANE 236
A QS +FS SS K E
Sbjct: 2723 AVPKQSKEFSISSSLKGNQE 2742
>SB_12094| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.00041)
Length = 754
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = +2
Query: 302 SKSDKLVNGTTTAEIKPEEKP---WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSK 472
+K+ K V TT EI ++ W E LE A+ + N P W K+S + RS
Sbjct: 437 AKTGKGVAKKTTREISNKQTSSTSWQGEELLRLEDALHSLAPNAPRYWTKVSQLVETRSA 496
Query: 473 KDCMKRYKELVE**KQRN 526
++C +Y+ +E QRN
Sbjct: 497 EECQLKYQGQLE---QRN 511
>SB_51089| Best HMM Match : I-set (HMM E-Value=1.4e-38)
Length = 1334
Score = 36.3 bits (80), Expect = 0.028
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +2
Query: 284 VDNTGISKSDKLVNGTTTAEIKPEE-KPWTKTEQELLEQAIKTFPVNTPERWEKISDCIP 460
++N S KL T E +P KPWTK EQ+L + +K W +I+ IP
Sbjct: 43 LNNPSSSTIPKLKKPTVVEESRPSHRKPWTKEEQDLFMEGLKLH----GRSWTRIATMIP 98
Query: 461 NRS 469
R+
Sbjct: 99 TRT 101
>SB_13989| Best HMM Match : Myb_DNA-binding (HMM E-Value=9.6e-24)
Length = 478
Score = 33.1 bits (72), Expect = 0.26
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 365 WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKELVE 508
W TE E+L+ A+ + N +W +I+ + +S K C R+ E ++
Sbjct: 11 WRNTEDEILKAAVMKYGKN---QWSRIASLLHRKSAKQCKARWYEWLD 55
>SB_19291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 362 PWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRY 493
PWTK E E + + + + P++W I+ + R K C +R+
Sbjct: 92 PWTKEEDEKVVELVNKYG---PKKWSLIAQHLKGRIGKQCRERW 132
>SB_51867| Best HMM Match : TP2 (HMM E-Value=9.2)
Length = 370
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/75 (32%), Positives = 35/75 (46%)
Frame = -1
Query: 572 TKLISFECYLDKFAACFFAFTIQLTLYISSCSLFLIDSGYSQRSSPTALECLLETS*LLV 393
T +++ Y D+ A FA T +T + S + S AL CL+ET+ +L
Sbjct: 288 TVFLAYRLYADQAATGDFA-TRAVTWGVVPLDTSRRCSLRERLSEHNALMCLMETTTILQ 346
Query: 392 PTILVLFWSRVFLQA 348
P I V W+R L A
Sbjct: 347 PCIQVTSWTRDLLLA 361
>SB_19190| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1829
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +3
Query: 87 QRWEVVANFLNQHCTFIDDKRLSAKEVLNKAKDLQSSDFSKSSLKKAANEEAFDQFKKKR 266
QR EVV F+N+ K ++L A+D+++ + S + A+ + D K
Sbjct: 608 QRHEVVRAFINKVVKGPQMKASETDKLLQLARDMKNCEISSREMHYEADINSMDTLTKIV 667
Query: 267 KKFPI 281
K+ P+
Sbjct: 668 KRLPV 672
>SB_55752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 302 SKSDKLVNGTTTAEIKPEEKP-WTKTEQELLEQA 400
+KSD N +T E KP E P W + QEL + A
Sbjct: 10 AKSDTTENTDSTTESKPSENPEWERARQELAKVA 43
>SB_24349| Best HMM Match : Exo_endo_phos (HMM E-Value=0.001)
Length = 534
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 335 TAEIKPEEKPWTKTE-QELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKELVE* 511
T I+ E PW + ++L+ K +++ K+ + + NR +K C +Y E
Sbjct: 344 TKTIQSNEPPWMNCKLKKLIRTRQKALAEGNQDQYRKLRNRV-NRERKSCRSKYYEAKVE 402
Query: 512 *KQRNKPQT 538
+ +KP T
Sbjct: 403 HLKESKPST 411
>SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 949
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 135 IDDKRLSAKEVLNKAKDLQSSDF-SKSSLKKAANEEAFDQFKKKRKKFPI 281
+D +AKE KAK LQ+ F S SSL A N + Q K+ P+
Sbjct: 678 VDSSANAAKEKQKKAKSLQAKKFASLSSLSIAKNLASMQQLPKRVTASPL 727
>SB_9753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 515
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 335 TAEIKPEEKPWTKTE-QELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKELVE* 511
T I+ E PW + ++L+ K +++ K+ + + NR +K C +Y E
Sbjct: 325 TKTIQSNEPPWMNCKLKKLIRTRQKALAEGNQDQYRKLRNRV-NRERKSCRSKYYEAKVE 383
Query: 512 *KQRNKPQT 538
+ +KP T
Sbjct: 384 HLKESKPST 392
>SB_20304| Best HMM Match : Vicilin_N (HMM E-Value=4.6)
Length = 261
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 260 EKKKISNHVDNTGISKSDKL-VNGTTTAEIKPEEKPWTKTEQEL 388
EKK + D G DKL V E KPE+KP K E +L
Sbjct: 132 EKKPEHKYEDKPGDKSKDKLEVKPEDRPEDKPEDKPEDKLEDKL 175
>SB_44586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 542
Score = 28.3 bits (60), Expect = 7.3
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 299 ISKSDKLVNGTTTAEIKPEEKPWTKTEQEL 388
+S KL+ G A++KP++ WT + L
Sbjct: 283 LSSEKKLLQGKLYAKVKPDDSTWTVVDNSL 312
>SB_28606| Best HMM Match : PAN (HMM E-Value=4.6e-10)
Length = 463
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 73 LLAQTRGGKWWQIS*TSIVHLLMTNGYQQKKY*TKLRTYKV 195
+++ G ++Q + HL+M +Q K + T+ TYKV
Sbjct: 205 IVSNKHGSDFYQFPVHHLSHLMMCRDHQTKNHPTRAATYKV 245
>SB_22310| Best HMM Match : Exo_endo_phos (HMM E-Value=0.12)
Length = 633
Score = 28.3 bits (60), Expect = 7.3
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = -1
Query: 473 FLIDSGYSQRSSPTALEC-LLETS*LLVPTILVLFWSR-VFLQ 351
FL+ S Y + S + +C L+ETS L VP + V+ WS VFL+
Sbjct: 38 FLLLS-YQRVSVISRAQCVLIETSTLTVPRVSVILWSNCVFLE 79
>SB_12110| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 360
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = -3
Query: 612 HEGNGLIYRHSICY*TNII*VLFRQVCGLFLCFYYSTNSLYLFMQSF 472
H+G ++ + ++ N+ ++ Q G CF Y SL L M F
Sbjct: 218 HQGAVMVAKDTLLSPDNVFNIVLEQWAGQLSCFAYKLQSLQLDMAEF 264
>SB_11070| Best HMM Match : Sugar_tr (HMM E-Value=0.00011)
Length = 468
Score = 27.9 bits (59), Expect = 9.6
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Frame = +3
Query: 3 VLRTPVEWTVEMTQMLIKAVNLFPAGTNQRWEVVANFLNQHCTFIDDKRLS-AKEVL--- 170
VL + + +MLI V LF W V F + C I R A+E+L
Sbjct: 215 VLSFTCAYFIREWRMLILCVTLFFVPFFFFWRV---FPDTACWLIAQGRQDKARELLMKY 271
Query: 171 -NKAKDLQSSDFSKSSLKKAANEEAFDQFKKKRKK 272
K K L SD + + ++ NEE +Q K+K K
Sbjct: 272 GGKKKKLLDSDNATAMIESIYNEEMREQEKRKNNK 306
>SB_4314| Best HMM Match : 4_1_CTD (HMM E-Value=1.8)
Length = 922
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = +2
Query: 293 TGISKSDKLVNGTTTAEIKPEEKPWTKTEQE--LLEQAIKTFPVNTPERWEKISDCIPNR 466
TG++K N T E+ +P KTE+ ++ +K V P K +D P
Sbjct: 443 TGVAKKPVKANNATKPEVGKPTEPLKKTEKPPVAAKKPVKANNVTKPVEVLKKADSFPGD 502
Query: 467 SKK 475
KK
Sbjct: 503 VKK 505
>SB_59088| Best HMM Match : AlaDh_PNT_N (HMM E-Value=4.3e-07)
Length = 217
Score = 27.9 bits (59), Expect = 9.6
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = -2
Query: 214 LLFEKSELCKSLALFNT--SFADSRLSSINVQCWFKKFATTSHLWFVPAGNKFTALMSIC 41
L+ E K+L T S DS LS + + + T ++W + G + + L IC
Sbjct: 38 LVHPDRESLKALGSLGTRASIDDSLLSKAGISTFLVRVPRTLNVWDLNQGARSSLLGGIC 97
Query: 40 VISTVHSTGVLR 5
+T + VL+
Sbjct: 98 RSATTPKSSVLK 109
>SB_9820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1060
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 73 LLAQTRGGKWWQIS*TSIVHLLMTNGYQQKKY*TKLRTYKV 195
+++ G ++Q + HL+M +Q K + T+ TYKV
Sbjct: 820 IVSNKHGSDFYQFPVKHLSHLMMCRDHQTKNHPTRAVTYKV 860
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,796,287
Number of Sequences: 59808
Number of extensions: 429468
Number of successful extensions: 1124
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1122
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2107953584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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