Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120589.Seq
(773 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain (pr... 62 6e-10
L23645-10|AAK26135.2| 300|Caenorhabditis elegans Hypothetical p... 56 4e-08
Z81523-2|CAB04248.1| 928|Caenorhabditis elegans Hypothetical pr... 38 0.011
Z81523-1|CAB04241.1| 944|Caenorhabditis elegans Hypothetical pr... 38 0.011
Z75711-11|CAB00038.1| 755|Caenorhabditis elegans Hypothetical p... 33 0.23
Z75710-10|CAB00029.1| 755|Caenorhabditis elegans Hypothetical p... 33 0.23
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 32 0.52
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 32 0.52
U58754-8|AAK72082.1| 325|Caenorhabditis elegans Serpentine rece... 31 0.91
AL031627-22|CAI79188.1| 213|Caenorhabditis elegans Hypothetical... 31 1.2
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr... 30 1.6
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ... 30 1.6
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF125463-3|AAD12860.1| 163|Caenorhabditis elegans Hypothetical ... 29 3.7
Z79605-6|CAB01906.3| 323|Caenorhabditis elegans Hypothetical pr... 29 4.9
U41994-1|AAO91711.1| 155|Caenorhabditis elegans Rnase h protein... 28 6.4
AF067609-5|AAC17534.1| 644|Caenorhabditis elegans Hypothetical ... 28 6.4
Z92817-3|CAJ43914.1| 511|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z92817-2|CAJ43913.1| 510|Caenorhabditis elegans Hypothetical pr... 28 8.5
>U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 11 protein.
Length = 589
Score = 61.7 bits (143), Expect = 6e-10
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = +2
Query: 350 PEEKPWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKELVE 508
P+E W+ TEQ+ LE AIK + PERWEKIS + +SKK C++R+K LV+
Sbjct: 531 PDEDVWSATEQKTLEDAIKKHKSSDPERWEKISTEVGTKSKKACIRRFKYLVQ 583
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Frame = +3
Query: 24 WTVEMTQMLIKAVNLFPAGTNQRWEVVANFLNQH---CTFIDDKRLSAKEVLNKAKDLQS 194
WT E Q+L+KA N FP GT +RW +A+++N+H T + K + K+V+ + K +Q+
Sbjct: 456 WTSEEIQLLVKASNTFPPGTVERWVQIADYINEHRKDSTGLPPK--TEKQVIKQCKAVQT 513
Score = 41.1 bits (92), Expect = 9e-04
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +2
Query: 341 EIKPEEKPWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKD 478
E + +++ WT E +LL +A TFP T ERW +I+D I N +KD
Sbjct: 448 EKQADKETWTSEEIQLLVKASNTFPPGTVERWVQIADYI-NEHRKD 492
>L23645-10|AAK26135.2| 300|Caenorhabditis elegans Hypothetical
protein F54F2.9 protein.
Length = 300
Score = 55.6 bits (128), Expect = 4e-08
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Frame = +2
Query: 314 KLVNGTTTAEIKPEEKP---WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCM 484
KL+ T + EEK W++ EQ+ E A++ +P T ERWE+IS+ I +++KK M
Sbjct: 223 KLLMTTIQQSVPVEEKSEDDWSQAEQKAFETALQKYPKGTDERWERISEEIGSKTKKQVM 282
Query: 485 KRYKELVE 508
R+K+L E
Sbjct: 283 VRFKQLAE 290
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 365 WTKTE-QELLEQAIKTFPVNTPERWEKISDCIPNRSKKD 478
WT E L+ + + +P TP RWE++ + NRS +D
Sbjct: 168 WTPDELASLVRLSTEKYPAGTPNRWEQMGRVL-NRSAED 205
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 24 WTVEMTQMLIK-AVNLFPAGTNQRWEVVANFLNQ 122
WT + L++ + +PAGT RWE + LN+
Sbjct: 168 WTPDELASLVRLSTEKYPAGTPNRWEQMGRVLNR 201
>Z81523-2|CAB04248.1| 928|Caenorhabditis elegans Hypothetical
protein F32H2.1b protein.
Length = 928
Score = 37.5 bits (83), Expect = 0.011
Identities = 15/73 (20%), Positives = 33/73 (45%)
Frame = +2
Query: 290 NTGISKSDKLVNGTTTAEIKPEEKPWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRS 469
N G +++ E+ K W++ E L K +N +W+K++ C+P R+
Sbjct: 279 NLGTNRTSYQCMEKYKTEVSQHSKEWSQDEDTKLIALTKITSINGHIQWDKVAQCMPGRT 338
Query: 470 KKDCMKRYKELVE 508
++ R+ ++
Sbjct: 339 RQQVRTRFSHTLD 351
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/66 (22%), Positives = 30/66 (45%)
Frame = +2
Query: 365 WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKELVE**KQRNKPQTCL 544
WT E LL A+ + W K++ + NR+ C +R+ ++ N+ T +
Sbjct: 359 WTDQEDVLLVCAVSRYGAKD---WAKVAQAVQNRNDSQCRERWTNVLNRSAHVNERFTLV 415
Query: 545 NNTQMI 562
+ Q++
Sbjct: 416 EDEQLL 421
>Z81523-1|CAB04241.1| 944|Caenorhabditis elegans Hypothetical
protein F32H2.1a protein.
Length = 944
Score = 37.5 bits (83), Expect = 0.011
Identities = 15/73 (20%), Positives = 33/73 (45%)
Frame = +2
Query: 290 NTGISKSDKLVNGTTTAEIKPEEKPWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRS 469
N G +++ E+ K W++ E L K +N +W+K++ C+P R+
Sbjct: 279 NLGTNRTSYQCMEKYKTEVSQHSKEWSQDEDTKLIALTKITSINGHIQWDKVAQCMPGRT 338
Query: 470 KKDCMKRYKELVE 508
++ R+ ++
Sbjct: 339 RQQVRTRFSHTLD 351
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/66 (22%), Positives = 30/66 (45%)
Frame = +2
Query: 365 WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKELVE**KQRNKPQTCL 544
WT E LL A+ + W K++ + NR+ C +R+ ++ N+ T +
Sbjct: 359 WTDQEDVLLVCAVSRYGAKD---WAKVAQAVQNRNDSQCRERWTNVLNRSAHVNERFTLV 415
Query: 545 NNTQMI 562
+ Q++
Sbjct: 416 EDEQLL 421
>Z75711-11|CAB00038.1| 755|Caenorhabditis elegans Hypothetical
protein D1081.8 protein.
Length = 755
Score = 33.1 bits (72), Expect = 0.23
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 365 WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKELVE 508
W TE E+L+ AI + N +W +I+ + +S K C R+ E ++
Sbjct: 11 WKNTEDEILKAAIMKYGKN---QWSRIASLLHRKSAKQCKARWFEWLD 55
>Z75710-10|CAB00029.1| 755|Caenorhabditis elegans Hypothetical
protein D1081.8 protein.
Length = 755
Score = 33.1 bits (72), Expect = 0.23
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 365 WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKELVE 508
W TE E+L+ AI + N +W +I+ + +S K C R+ E ++
Sbjct: 11 WKNTEDEILKAAIMKYGKN---QWSRIASLLHRKSAKQCKARWFEWLD 55
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 31.9 bits (69), Expect = 0.52
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +2
Query: 350 PEEKPWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKEL 502
P + WT+ E LL +A++ F + W K+ D + R++ +C+ ++ +L
Sbjct: 252 PPGRDWTEQETCLLLEALEMFK----DDWNKVCDHVGTRTQHECVLKFLQL 298
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 31.9 bits (69), Expect = 0.52
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +2
Query: 350 PEEKPWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKEL 502
P + WT+ E LL +A++ F + W K+ D + R++ +C+ ++ +L
Sbjct: 252 PPGRDWTEQETCLLLEALEMFK----DDWNKVCDHVGTRTQHECVLKFLQL 298
>U58754-8|AAK72082.1| 325|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 13 protein.
Length = 325
Score = 31.1 bits (67), Expect = 0.91
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -1
Query: 578 FVTKLISFECYLDKFAACFFAFTIQLTLYISSCSLFLIDSGYSQRSSPT 432
+ T +++F + F AC F F +Q L S SL I +G+ PT
Sbjct: 41 YATLIVNFA--ITDFCACLFDFFVQQRLIPSDLSLAYISNGFCHHFGPT 87
>AL031627-22|CAI79188.1| 213|Caenorhabditis elegans Hypothetical
protein Y102A5C.36 protein.
Length = 213
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1
Query: 557 FECYLDKFAACFFAFTIQLTLYISS 483
F C ++ CFF F ++LTLY+SS
Sbjct: 74 FLCLQRRYIHCFFHFLLKLTLYLSS 98
>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 10/80 (12%)
Frame = +3
Query: 39 TQMLIKAVNLFPAGTNQRWEVVANF-----LNQHCTFIDDKRLSAKEVLNKAKDLQSSD- 200
TQ+L+ N+ N V+ N N H TFI+DK E L+K ++L+ +D
Sbjct: 515 TQLLLSGNNISTVDLNSNIHVLENLEVLDLSNNHITFINDKSF---EKLSKLRELRLNDN 571
Query: 201 ----FSKSSLKKAANEEAFD 248
FS L + +N E D
Sbjct: 572 KLHHFSSMVLDEQSNLEILD 591
>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 10/80 (12%)
Frame = +3
Query: 39 TQMLIKAVNLFPAGTNQRWEVVANF-----LNQHCTFIDDKRLSAKEVLNKAKDLQSSD- 200
TQ+L+ N+ N V+ N N H TFI+DK E L+K ++L+ +D
Sbjct: 515 TQLLLSGNNISTVDLNSNIHVLENLEVLDLSNNHITFINDKSF---EKLSKLRELRLNDN 571
Query: 201 ----FSKSSLKKAANEEAFD 248
FS L + +N E D
Sbjct: 572 KLHHFSSMVLDEQSNLEILD 591
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +3
Query: 108 NFLNQHCTFIDDKRLSAKEVLNKAKDLQSSDFSKSSLKKAANEEAFDQFKKKRKK 272
+ L++ T +KR+SAKE LN + LK +++ + + KK+KK
Sbjct: 580 DLLDKMLTLNPEKRISAKEALNHPWIRSLEHTTVQPLKLPQHQDCHEMWSKKQKK 634
>AF125463-3|AAD12860.1| 163|Caenorhabditis elegans Hypothetical
protein Y49F6C.8 protein.
Length = 163
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +2
Query: 365 WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKD 478
WTK ++E LE + E W+ +DC + K+
Sbjct: 124 WTKEDREELESGLAVMRQTIQESWKDAADCEQEKRSKN 161
>Z79605-6|CAB01906.3| 323|Caenorhabditis elegans Hypothetical
protein ZK678.4 protein.
Length = 323
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = -1
Query: 719 T*MELFAHNLTIFYILVF-KFFVISFPYKTISFIFYNMKAMV*STDIQFVTKLISFECYL 543
T M F++ T+F L + F++ P+ SF F + T F++ ++ +
Sbjct: 69 TLMGTFSYLNTLFIRLTINRVFIVIKPFN--SFWFSQPRIF---TYCGFISLMVFASLLI 123
Query: 542 DKFAACFFAFTIQLTLYISSCS 477
F++CF F + + ++S C+
Sbjct: 124 PLFSSCFIYFRLDILTFVSGCA 145
>U41994-1|AAO91711.1| 155|Caenorhabditis elegans Rnase h protein
1.0, isoform a protein.
Length = 155
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +3
Query: 69 FPAGTNQRWEVVANFLNQHCTFIDDKRLSAKEVLNKAKDLQSSDFSKSSLKKAANEEAFD 248
+P +++W + + + + K AK+ N+ K +S + S +KA EE+ +
Sbjct: 92 YPQPLHKKWSTLEEAIAYFHKYYEGKE-EAKKAENEEKPDKSE--KRESKRKADQEESVE 148
Query: 249 QFKKKRKKF 275
KKK+KKF
Sbjct: 149 --KKKKKKF 155
>AF067609-5|AAC17534.1| 644|Caenorhabditis elegans Hypothetical
protein C23H5.7 protein.
Length = 644
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 522 LCFYYSTNSLYLFMQSFFDRFGIQSEIFS 436
L FY NS Y ++ SFF FG+ +F+
Sbjct: 37 LYFYVPFNSKYYYIWSFFVSFGVMYNMFA 65
>Z92817-3|CAJ43914.1| 511|Caenorhabditis elegans Hypothetical
protein W08G11.3b protein.
Length = 511
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +3
Query: 135 IDDKRLSAKEVLNKAKDLQSSDFSKSSLKKAANEE 239
I DKR +E++ K +++ +++ ++L KAAN++
Sbjct: 262 ITDKRNIEEELIRKEDEIRLANYKSATLLKAANDK 296
>Z92817-2|CAJ43913.1| 510|Caenorhabditis elegans Hypothetical
protein W08G11.3a protein.
Length = 510
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +3
Query: 135 IDDKRLSAKEVLNKAKDLQSSDFSKSSLKKAANEE 239
I DKR +E++ K +++ +++ ++L KAAN++
Sbjct: 261 ITDKRNIEEELIRKEDEIRLANYKSATLLKAANDK 295
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,791,714
Number of Sequences: 27780
Number of extensions: 350169
Number of successful extensions: 1154
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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