Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120589.Seq
(773 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g11450.1 68416.m01396 DNAJ heat shock N-terminal domain-conta... 54 1e-07
At5g06110.1 68418.m00679 DNAJ heat shock N-terminal domain-conta... 52 4e-07
At3g11280.2 68416.m01372 myb family transcription factor contain... 48 5e-06
At3g11280.1 68416.m01371 myb family transcription factor contain... 48 5e-06
At5g45420.1 68418.m05581 myb family transcription factor contain... 48 7e-06
At5g58900.1 68418.m07379 myb family transcription factor contain... 48 9e-06
At5g05790.1 68418.m00637 myb family transcription factor contain... 48 9e-06
At2g38090.1 68415.m04676 myb family transcription factor contain... 45 6e-05
At5g04760.1 68418.m00490 myb family transcription factor contain... 44 9e-05
At1g19510.1 68414.m02430 myb family transcription factor contain... 42 6e-04
At5g01200.1 68418.m00025 myb family transcription factor contain... 41 8e-04
At1g75250.1 68414.m08742 myb family transcription factor contain... 41 8e-04
At4g39250.1 68417.m05556 myb family transcription factor contain... 40 0.001
At3g09370.1 68416.m01111 myb family transcription factor (MYB3R3... 40 0.001
At4g00540.2 68417.m00075 myb family transcription factor 40 0.002
At4g00540.1 68417.m00074 myb family transcription factor 40 0.002
At2g23290.1 68415.m02780 myb family transcription factor 40 0.002
At5g11510.1 68418.m01343 myb family transcription factor (MYB3R4... 38 0.006
At4g36570.1 68417.m05192 myb family transcription factor conatin... 38 0.006
At5g02320.1 68418.m00155 myb family transcription factor (MYB3R5... 38 0.010
At2g13960.1 68415.m01551 myb family transcription factor contain... 38 0.010
At5g08520.1 68418.m01011 myb family transcription factor contain... 36 0.023
At5g04110.1 68418.m00397 DNA topoisomerase II family protein sii... 36 0.023
At4g32730.2 68417.m05680 myb family transcription factor identic... 36 0.023
At4g32730.1 68417.m05679 myb family transcription factor identic... 36 0.023
At4g37260.1 68417.m05274 myb family transcription factor (MYB73)... 36 0.030
At3g50060.1 68416.m05473 myb family transcription factor contain... 36 0.030
At2g21650.1 68415.m02575 myb family transcription factor contain... 36 0.039
At1g49010.1 68414.m05495 myb family transcription factor contain... 35 0.069
At1g09770.1 68414.m01096 myb family transcription factor contain... 34 0.12
At2g39880.1 68415.m04901 myb family transcription factor (MYB25)... 33 0.16
At5g67300.1 68418.m08486 myb family transcription factor contain... 33 0.21
At3g09230.1 68416.m01097 myb family transcription factor identic... 33 0.21
At2g33610.1 68415.m04119 SWIRM domain-containing protein / DNA-b... 33 0.28
At4g11170.1 68417.m01809 disease resistance protein (TIR-NBS-LRR... 32 0.37
At5g23650.1 68418.m02773 myb family transcription factor contain... 32 0.49
At3g53440.2 68416.m05898 expressed protein 31 0.64
At3g53440.1 68416.m05897 expressed protein 31 0.64
At3g18100.2 68416.m02302 myb family transcription factor (MYB4R1... 30 1.5
At3g18100.1 68416.m02301 myb family transcription factor (MYB4R1... 30 1.5
At3g55730.1 68416.m06191 myb family transcription factor (MYB109... 30 2.0
At4g34430.4 68417.m04893 DNA-binding family protein contains Pfa... 29 2.6
At4g34430.3 68417.m04892 DNA-binding family protein contains Pfa... 29 2.6
At4g34430.2 68417.m04891 DNA-binding family protein contains Pfa... 29 2.6
At4g34430.1 68417.m04890 DNA-binding family protein contains Pfa... 29 2.6
At2g27650.1 68415.m03351 ubiquitin carboxyl-terminal hydrolase-r... 29 2.6
At5g40430.1 68418.m04903 myb family transcription factor (MYB22)... 29 3.4
At5g40360.1 68418.m04896 myb family transcription factor (MYB115... 29 3.4
At4g18770.1 68417.m02773 myb family transcription factor (MYB98)... 29 3.4
At5g46950.1 68418.m05788 invertase/pectin methylesterase inhibit... 29 4.5
At5g17800.1 68418.m02087 myb family transcription factor (MYB56)... 28 6.0
At4g29450.1 68417.m04204 leucine-rich repeat protein kinase, put... 28 6.0
At3g07740.2 68416.m00935 transcriptional adaptor (ADA2a) identic... 28 6.0
At3g07740.1 68416.m00936 transcriptional adaptor (ADA2a) identic... 28 6.0
At4g22510.1 68417.m03249 hypothetical protein 28 7.9
At1g73410.1 68414.m08499 myb family transcription factor (MYB54)... 28 7.9
>At3g11450.1 68416.m01396 DNAJ heat shock N-terminal
domain-containing protein / cell division
protein-related similar to GlsA [Volvox carteri f.
nagariensis] GI:4633129; contains Pfam profiles PF00226
DnaJ domain, PF00249 Myb-like DNA-binding domain
Length = 663
Score = 53.6 bits (123), Expect = 1e-07
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +2
Query: 293 TGISKSDKLVNGTTTAEI--KPEEKPWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNR 466
T + KS + E+ + W+ ++ L QA+KTFP T +RWE+++ +P +
Sbjct: 581 TVVGKSSSSQSSDNNGEVGGSSDADSWSTVQERALVQALKTFPKETSQRWERVAAAVPGK 640
Query: 467 SKKDCMKRYKELVE 508
+ C K++ EL E
Sbjct: 641 TMNQCKKKFAELKE 654
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +2
Query: 353 EEKPWTKTEQELLEQAIKTFPVNTPERWEKISDCI-PNRSKKDCMKRYKELV 505
+++PW+K E ++L + + +P T RWE IS+ I RS ++ +K K ++
Sbjct: 478 KKQPWSKEEIDMLRKGMIKYPKGTSRRWEVISEYIGTGRSVEEILKATKTVL 529
Score = 37.5 bits (83), Expect = 0.010
Identities = 25/82 (30%), Positives = 41/82 (50%)
Frame = +3
Query: 24 WTVEMTQMLIKAVNLFPAGTNQRWEVVANFLNQHCTFIDDKRLSAKEVLNKAKDLQSSDF 203
W+ E ML K + +P GT++RWEV++ ++ S +E+L K +
Sbjct: 482 WSKEEIDMLRKGMIKYPKGTSRRWEVISEYIG--------TGRSVEEILKATKTV----- 528
Query: 204 SKSSLKKAANEEAFDQFKKKRK 269
L+K + +AFD F +KRK
Sbjct: 529 ---LLQKPDSAKAFDSFLEKRK 547
Score = 31.5 bits (68), Expect = 0.64
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 24 WTVEMTQMLIKAVNLFPAGTNQRWEVVA 107
W+ + L++A+ FP T+QRWE VA
Sbjct: 607 WSTVQERALVQALKTFPKETSQRWERVA 634
>At5g06110.1 68418.m00679 DNAJ heat shock N-terminal
domain-containing protein / cell division
protein-related similar to GlsA [Volvox carteri f.
nagariensis] GI:4633129; contains Pfam profiles PF00226
DnaJ domain, PF00249 Myb-like DNA-binding domain
Length = 663
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +2
Query: 287 DNTGISKSDKLVNGTTTAEIKPEEKP--WTKTEQELLEQAIKTFPVNTPERWEKISDCIP 460
+ G +K + NG + P W+ ++ L QA+KTFP T +RWE+++ +P
Sbjct: 579 EQNGKTKENNNSNGNSEPAAASGSDPDGWSAVQERALVQALKTFPKETNQRWERVATAVP 638
Query: 461 NRSKKDCMKRYKEL 502
++ C K++ +L
Sbjct: 639 GKTMNQCKKKFADL 652
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Frame = +2
Query: 269 KISNHVDNTGISKSDKLVNGTT-TAEIKPEEKPWTKTEQELLEQAIKTFPVNTPERWEKI 445
K + H++ G +++ V TA + +EKPW+K E ++L + FP T +RWE I
Sbjct: 444 KQNGHIEANGHVEANGHVEAKVDTATHEKKEKPWSKEEIDMLRKGTTKFPKGTSQRWEVI 503
Query: 446 SDCI-PNRSKKDCMKRYKELV 505
S+ I RS ++ +K K ++
Sbjct: 504 SEYIGTGRSVEEILKATKTVL 524
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/70 (28%), Positives = 35/70 (50%)
Frame = +3
Query: 24 WTVEMTQMLIKAVNLFPAGTNQRWEVVANFLNQHCTFIDDKRLSAKEVLNKAKDLQSSDF 203
W+ E ML K FP GT+QRWEV++ ++ + + + + +L K ++ D
Sbjct: 477 WSKEEIDMLRKGTTKFPKGTSQRWEVISEYIGTGRSVEEILKATKTVLLQKPDSAKAFDS 536
Query: 204 SKSSLKKAAN 233
+ K AA+
Sbjct: 537 FLENRKPAAS 546
Score = 34.3 bits (75), Expect = 0.091
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 15 PVEWTVEMTQMLIKAVNLFPAGTNQRWEVVA 107
P W+ + L++A+ FP TNQRWE VA
Sbjct: 604 PDGWSAVQERALVQALKTFPKETNQRWERVA 634
>At3g11280.2 68416.m01372 myb family transcription factor contains
Pfam profile: PF00249 Myb-like DNA-binding domain
Length = 263
Score = 48.4 bits (110), Expect = 5e-06
Identities = 18/48 (37%), Positives = 32/48 (66%)
Frame = +2
Query: 365 WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKELVE 508
WTK E ++ E+A+ + ++P+RW K++ IP ++ D MK+Y +L E
Sbjct: 33 WTKEENKMFERALAIYAEDSPDRWFKVASMIPGKTVFDVMKQYSKLEE 80
>At3g11280.1 68416.m01371 myb family transcription factor contains
Pfam profile: PF00249 Myb-like DNA-binding domain
Length = 263
Score = 48.4 bits (110), Expect = 5e-06
Identities = 18/48 (37%), Positives = 32/48 (66%)
Frame = +2
Query: 365 WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKELVE 508
WTK E ++ E+A+ + ++P+RW K++ IP ++ D MK+Y +L E
Sbjct: 33 WTKEENKMFERALAIYAEDSPDRWFKVASMIPGKTVFDVMKQYSKLEE 80
>At5g45420.1 68418.m05581 myb family transcription factor contains
Pfam profile: PF00249 Myb DNA binding domain
Length = 309
Score = 48.0 bits (109), Expect = 7e-06
Identities = 21/46 (45%), Positives = 26/46 (56%)
Frame = +2
Query: 365 WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKEL 502
W+ E L A+K FP RWEKI+ +P +SK CMKR EL
Sbjct: 252 WSNGEDIALLNALKAFPKEAAMRWEKIAAAVPGKSKAACMKRVTEL 297
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 353 EEKPWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSK-KDCMKRYKELVE 508
E K WT E E+L++ + P P RWE ++ R K ++ +K+ KE+ E
Sbjct: 156 ETKDWTAEEIEILKKQLIKHPAGKPGRWETVASAFGGRYKTENVIKKAKEIGE 208
Score = 32.7 bits (71), Expect = 0.28
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +3
Query: 21 EWTVEMTQMLIKAVNLFPAGTNQRWEVVAN-FLNQHCTFIDDKRLSAKEVLNKAKDLQSS 197
+WT E ++L K + PAG RWE VA+ F ++ T ++ AKE+ K K +S
Sbjct: 159 DWTAEEIEILKKQLIKHPAGKPGRWETVASAFGGRYKT--ENVIKKAKEIGEK-KIYESD 215
Query: 198 DFSKSSLKKAANE 236
D+++ + A++
Sbjct: 216 DYAQFLKNRKASD 228
>At5g58900.1 68418.m07379 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 288
Score = 47.6 bits (108), Expect = 9e-06
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +2
Query: 353 EEKPWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKEL 502
E WT E + E A+ + NTP+RW+K++ IP ++ D +++Y +L
Sbjct: 30 EGATWTAAENKAFENALAVYDDNTPDRWQKVAAVIPGKTVSDVIRQYNDL 79
>At5g05790.1 68418.m00637 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 277
Score = 47.6 bits (108), Expect = 9e-06
Identities = 18/52 (34%), Positives = 32/52 (61%)
Frame = +2
Query: 353 EEKPWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKELVE 508
+ WTK E + E+A+ + +TP+RW K++ IP ++ D M++Y +L E
Sbjct: 27 QSSSWTKEENKKFERALAVYADDTPDRWFKVAAMIPGKTISDVMRQYSKLEE 78
>At2g38090.1 68415.m04676 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 298
Score = 44.8 bits (101), Expect = 6e-05
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = +2
Query: 365 WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKELVE 508
WT E + E A+ + +TP+RW +++ +P ++ D +K+Y+EL E
Sbjct: 29 WTAEENKKFENALAFYDKDTPDRWSRVAAMLPGKTVGDVIKQYRELEE 76
>At5g04760.1 68418.m00490 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 215
Score = 44.4 bits (100), Expect = 9e-05
Identities = 18/47 (38%), Positives = 32/47 (68%)
Frame = +2
Query: 365 WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKELV 505
WT++E ++ EQA+ FP +P RWE+I+D + ++S + + Y+ LV
Sbjct: 6 WTRSEDKMFEQALVLFPEGSPNRWERIADQL-HKSAGEVREHYEVLV 51
Score = 31.5 bits (68), Expect = 0.64
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 21 EWTVEMTQMLIKAVNLFPAGTNQRWEVVANFLNQ 122
+WT +M +A+ LFP G+ RWE +A+ L++
Sbjct: 5 QWTRSEDKMFEQALVLFPEGSPNRWERIADQLHK 38
>At1g19510.1 68414.m02430 myb family transcription factor contains
PFAM profile: PF00249 myb-like DNA binding domain
Length = 100
Score = 41.5 bits (93), Expect = 6e-04
Identities = 13/48 (27%), Positives = 30/48 (62%)
Frame = +2
Query: 365 WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKELVE 508
WT + ++ E+A+ + +TP+RW+ ++ + ++S ++ + Y LVE
Sbjct: 12 WTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVE 59
>At5g01200.1 68418.m00025 myb family transcription factor contains
PFAM profile: PF00249 myb-like DNA binding domain
Length = 267
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 356 EKPWTKTEQELLEQAIKTFP-VNTPERWEKISDCIPNRSKKDCMKRYKEL 502
E WT E + E+A+ + E W KI+D IP ++ D +KRYKEL
Sbjct: 27 EATWTAEENKRFEKALAYLDDKDNLESWSKIADLIPGKTVADVIKRYKEL 76
>At1g75250.1 68414.m08742 myb family transcription factor contains
PFAM profile: PF00249 myb-like DNA binding domain
Length = 126
Score = 41.1 bits (92), Expect = 8e-04
Identities = 13/49 (26%), Positives = 30/49 (61%)
Frame = +2
Query: 362 PWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKELVE 508
PWT ++ ++ E+A+ + +TP+RW ++ + ++ ++ + Y LVE
Sbjct: 11 PWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVE 59
>At4g39250.1 68417.m05556 myb family transcription factor contains
PFAM profile: PF00249 myb-like DNA binding domain
Length = 97
Score = 40.3 bits (90), Expect = 0.001
Identities = 13/48 (27%), Positives = 29/48 (60%)
Frame = +2
Query: 365 WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKELVE 508
WT + + EQA+ T+ +TP RW+ ++ + ++ ++ + Y+ LV+
Sbjct: 14 WTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQ 61
>At3g09370.1 68416.m01111 myb family transcription factor (MYB3R3)
contains Pfam profile: Myb DNA-binding proteins;
identical to cDNA putative c-myb-like transcription
factor (MYB3R3) GI:15375285
Length = 505
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/60 (30%), Positives = 34/60 (56%)
Frame = +2
Query: 326 GTTTAEIKPEEKPWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKELV 505
G T+ I+ + WT E E L QA+ TF + W+ I+ P+R++ C+ R+++++
Sbjct: 68 GRTSGPIRRAKGGWTPEEDETLRQAVDTF---KGKSWKNIAKSFPDRTEVQCLHRWQKVL 124
Score = 32.3 bits (70), Expect = 0.37
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 362 PWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRY 493
PWT E E + + ++ + P +W I+ +P R K C +R+
Sbjct: 132 PWTHEEDEKIVELVEKYG---PAKWSIIAQSLPGRIGKQCRERW 172
>At4g00540.2 68417.m00075 myb family transcription factor
Length = 401
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 365 WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRY 493
W K E ELL + +K + N W KIS +P R K C +R+
Sbjct: 104 WKKEEDELLSELVKDYMENDRPPWSKISKELPGRIGKQCRERW 146
>At4g00540.1 68417.m00074 myb family transcription factor
Length = 437
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 365 WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRY 493
W K E ELL + +K + N W KIS +P R K C +R+
Sbjct: 104 WKKEEDELLSELVKDYMENDRPPWSKISKELPGRIGKQCRERW 146
>At2g23290.1 68415.m02780 myb family transcription factor
Length = 309
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +2
Query: 320 VNGTTTAEIKPEEKPWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRY 493
++G+T E+ + PW+ E +LL+ ++ + P W IS IP RS K C R+
Sbjct: 1 MSGSTRKEMDRIKGPWSPEEDDLLQSLVQK---HGPRNWSLISKSIPGRSGKSCRLRW 55
>At5g11510.1 68418.m01343 myb family transcription factor (MYB3R4)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 961
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 362 PWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRY 493
PWTK E E++ Q I+ + P++W I+ +P R K C +R+
Sbjct: 83 PWTKEEDEMIVQLIEKYG---PKKWSTIARFLPGRIGKQCRERW 123
>At4g36570.1 68417.m05192 myb family transcription factor conatins
PFAM profile: PF00249 myb-like DNA binding domain
Length = 85
Score = 38.3 bits (85), Expect = 0.006
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +2
Query: 365 WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKD 478
WT+ E +L E+A+ T+ +TP+RW ++ + +S ++
Sbjct: 12 WTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEE 49
>At5g02320.1 68418.m00155 myb family transcription factor (MYB3R5)
contains Pfam profile: PF00249 myb-like DNA binding
domain; identical to cDNA putative c-myb-like
transcription factor MYB3R-5 (MYB3R5) GI:15375300
Length = 548
Score = 37.5 bits (83), Expect = 0.010
Identities = 15/58 (25%), Positives = 35/58 (60%)
Frame = +2
Query: 332 TTAEIKPEEKPWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKELV 505
T+ ++ + WT E E L +A++ + +RW+KI++ P R++ C+ R+++++
Sbjct: 67 TSGPMRRAKGGWTPEEDETLRRAVEKYK---GKRWKKIAEFFPERTEVQCLHRWQKVL 121
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 362 PWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRY 493
PWT+ E + + + +K + P +W I+ +P R K C +R+
Sbjct: 129 PWTQEEDDKIVELVKKYG---PAKWSVIAKSLPGRIGKQCRERW 169
>At2g13960.1 68415.m01551 myb family transcription factor contains
PFAM profile: PF00249 myb-like DNA binding domain
Length = 150
Score = 37.5 bits (83), Expect = 0.010
Identities = 15/58 (25%), Positives = 35/58 (60%)
Frame = +2
Query: 332 TTAEIKPEEKPWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKELV 505
T+ ++ + WT E E L +A++ + +RW+KI++ P R++ C+ R+++++
Sbjct: 67 TSGPMRRAKGGWTPEEDETLRRAVEKYK---GKRWKKIAEFFPERTQVQCLHRWQKVL 121
>At5g08520.1 68418.m01011 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 298
Score = 36.3 bits (80), Expect = 0.023
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +2
Query: 335 TAEIKPEEKPWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKELVE 508
T E + W++ + E+A+ + ERWEKI+ +P +S + + Y+ LVE
Sbjct: 2 TVEEVSDGSVWSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVE 59
>At5g04110.1 68418.m00397 DNA topoisomerase II family protein
siimilar to DNA topoisomerase II subunit B [Thermotoga
maritima] GI:1622792; contains Pfam profiles PF00204:
DNA topoisomerase II (N-terminal region), PF00249:
Myb-like DNA-binding domain
Length = 546
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 359 KPWTKTEQELLEQAIKTFPVNTPER-WEKISDCIPNRSKKDCMKRY 493
K WT E+ E +K P+++ + WE S+ P +SKKD + Y
Sbjct: 468 KSWTAKEERRFEALVKKNPLSSSDGFWEFASNAFPQKSKKDLLSYY 513
>At4g32730.2 68417.m05680 myb family transcription factor identical
to PC-MYB1 GI:5678826 from [Arabidopsis thaliana];
Length = 995
Score = 36.3 bits (80), Expect = 0.023
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +2
Query: 326 GTTTAEIKPEEK-PWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKEL 502
G T+ + K WT E E+L +A++ F + W+KI++C +R+ C+ R++++
Sbjct: 24 GRTSGPARRSTKGQWTPEEDEVLCKAVERFQ---GKNWKKIAECFKDRTDVQCLHRWQKV 80
Query: 503 V 505
+
Sbjct: 81 L 81
Score = 32.3 bits (70), Expect = 0.37
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 362 PWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRY 493
PW+K E + ++ + P++W IS +P R K C +R+
Sbjct: 89 PWSKEEDNTIIDLVEKYG---PKKWSTISQHLPGRIGKQCRERW 129
>At4g32730.1 68417.m05679 myb family transcription factor identical
to PC-MYB1 GI:5678826 from [Arabidopsis thaliana];
Length = 776
Score = 36.3 bits (80), Expect = 0.023
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +2
Query: 326 GTTTAEIKPEEK-PWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKEL 502
G T+ + K WT E E+L +A++ F + W+KI++C +R+ C+ R++++
Sbjct: 24 GRTSGPARRSTKGQWTPEEDEVLCKAVERFQ---GKNWKKIAECFKDRTDVQCLHRWQKV 80
Query: 503 V 505
+
Sbjct: 81 L 81
Score = 32.3 bits (70), Expect = 0.37
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 362 PWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRY 493
PW+K E + ++ + P++W IS +P R K C +R+
Sbjct: 89 PWSKEEDNTIIDLVEKYG---PKKWSTISQHLPGRIGKQCRERW 129
>At4g37260.1 68417.m05274 myb family transcription factor (MYB73)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 320
Score = 35.9 bits (79), Expect = 0.030
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 362 PWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRY 493
PW+ E +LL++ ++ + P W IS IP RS K C R+
Sbjct: 15 PWSPEEDDLLQRLVQK---HGPRNWSLISKSIPGRSGKSCRLRW 55
>At3g50060.1 68416.m05473 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain;
identical to cDNA MYB-related protein (1107 bp)
GI:1263096
Length = 301
Score = 35.9 bits (79), Expect = 0.030
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 362 PWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRY 493
PW++ E E L + ++ + P W IS IP RS K C R+
Sbjct: 8 PWSQEEDEQLRRMVEKYG---PRNWSAISKSIPGRSGKSCRLRW 48
>At2g21650.1 68415.m02575 myb family transcription factor contains
PFAM profile: PF00249 myb-like DNA-binding domain
Length = 101
Score = 35.5 bits (78), Expect = 0.039
Identities = 11/47 (23%), Positives = 27/47 (57%)
Frame = +2
Query: 365 WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKELV 505
WT + + E+A+ + +TP+RW ++ + ++ ++ ++Y LV
Sbjct: 14 WTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLV 60
>At1g49010.1 68414.m05495 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 314
Score = 34.7 bits (76), Expect = 0.069
Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Frame = +2
Query: 365 WTKTEQELLEQAIKTFPVN---TPERWEKISDCIPNRSKKDCMKRYKELVE 508
W++ E++ E AI V T ++W K+S +P+++ ++ K Y+ L+E
Sbjct: 8 WSREEEKAFENAIALHCVEEEITEDQWNKMSSMVPSKALEEVKKHYQILLE 58
>At1g09770.1 68414.m01096 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 844
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 365 WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKELVE 508
W TE E+L+ A+ + N +W +IS + +S K C R+ E ++
Sbjct: 10 WKNTEDEILKAAVMKYGKN---QWARISSLLVRKSAKQCKARWYEWLD 54
>At2g39880.1 68415.m04901 myb family transcription factor (MYB25)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 367
Score = 33.5 bits (73), Expect = 0.16
Identities = 22/65 (33%), Positives = 32/65 (49%)
Frame = +2
Query: 299 ISKSDKLVNGTTTAEIKPEEKPWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKD 478
++KSD NG +++K PW + E L + +K + P W IS IP RS K
Sbjct: 36 LAKSD--ANGGGKSKVKG---PWLPEQDEALTRLVK---MCGPRNWNLISRGIPGRSGKS 87
Query: 479 CMKRY 493
C R+
Sbjct: 88 CRLRW 92
>At5g67300.1 68418.m08486 myb family transcription factor contains
PFAM profile: myb DNA binding domain PF00249
Length = 305
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +2
Query: 362 PWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRY 493
PW+ E E L + + + P W IS IP RS K C R+
Sbjct: 8 PWSPEEDEQLRRLVVKYG---PRNWTVISKSIPGRSGKSCRLRW 48
>At3g09230.1 68416.m01097 myb family transcription factor identical
to transforming protein (myb) homolog GB:S22520
[Arabidopsis thaliana]
Length = 393
Score = 33.1 bits (72), Expect = 0.21
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 362 PWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRY 493
PW+K E ++L + +K W I+ IP RS K C R+
Sbjct: 57 PWSKEEDDVLSELVKRLGARN---WSFIARSIPGRSGKSCRLRW 97
>At2g33610.1 68415.m04119 SWIRM domain-containing protein /
DNA-binding family protein contains similarity to
SWI/SNF complex 170 KDa subunit [Homo sapiens]
gi|1549241|gb|AAC50694; contains Pfam domain PF04433:
SWIRM domain, PF00249: Myb-like DNA-binding domain
Length = 469
Score = 32.7 bits (71), Expect = 0.28
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +2
Query: 341 EIKPEEKP-WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKEL 502
EI E KP W+ E LL +A+ + + W+K++ + R++KDC+ ++ +L
Sbjct: 219 EISEESKPEWSDKEILLLLEAVMHYG----DDWKKVASHVIGRTEKDCVSQFVKL 269
>At4g11170.1 68417.m01809 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1095
Score = 32.3 bits (70), Expect = 0.37
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +2
Query: 299 ISKSDKLVN--GTTTAEIKPEEKPWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSK 472
IS + +L+N GT E+ P K W+K ++ +E+A V+ P EK+ C+ +
Sbjct: 720 ISTNIRLLNLIGTAITEVPPSVKYWSKIDEICMERAKVKRLVHVPYVLEKL--CLRENKE 777
Query: 473 KDCMKRY 493
+ + RY
Sbjct: 778 LETIPRY 784
>At5g23650.1 68418.m02773 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 337
Score = 31.9 bits (69), Expect = 0.49
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +2
Query: 365 WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKEL 502
W+K + E+A+ + T RW+KI+ +P ++ + ++ Y L
Sbjct: 13 WSKDDDIAFEKALAIYNDKTEIRWKKIATVVPGKTLEQVIEHYNIL 58
>At3g53440.2 68416.m05898 expressed protein
Length = 512
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 338 AEIKPEEKPWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKR 490
A+ K E+ WT+ E EL Q +P W+K++ +P +S ++C R
Sbjct: 252 AKNKLEKGGWTE-ELELALQGAYLTVKPSPNFWKKVAKMVPGKSAQECFDR 301
>At3g53440.1 68416.m05897 expressed protein
Length = 512
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 338 AEIKPEEKPWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKR 490
A+ K E+ WT+ E EL Q +P W+K++ +P +S ++C R
Sbjct: 252 AKNKLEKGGWTE-ELELALQGAYLTVKPSPNFWKKVAKMVPGKSAQECFDR 301
>At3g18100.2 68416.m02302 myb family transcription factor (MYB4R1)
contains Pfam profile: PF00249 Myb-like DNA-binding
domain
Length = 634
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 344 IKPEEK-PWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRY 493
++P K W+ E + ++ A+ F + W KIS +P R++ C +R+
Sbjct: 328 LRPTRKGTWSLEEDKRVKVAVTLFG---SQNWHKISQFVPGRTQTQCRERW 375
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 365 WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKEL 502
WT+ E E L +AI + W K++ + R+ C++R+K L
Sbjct: 388 WTEEEDEKLREAIAEHGYS----WSKVATNLSCRTDNQCLRRWKRL 429
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +2
Query: 356 EKPWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKE 499
+K WT E + L A++ F + W+ +++ + R+ C R+K+
Sbjct: 282 KKEWTAEEDDQLRTAVELFG---EKDWQSVANVLKGRTGTQCSNRWKK 326
>At3g18100.1 68416.m02301 myb family transcription factor (MYB4R1)
contains Pfam profile: PF00249 Myb-like DNA-binding
domain
Length = 847
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 344 IKPEEK-PWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRY 493
++P K W+ E + ++ A+ F + W KIS +P R++ C +R+
Sbjct: 541 LRPTRKGTWSLEEDKRVKVAVTLFG---SQNWHKISQFVPGRTQTQCRERW 588
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 365 WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKEL 502
WT+ E E L +AI + W K++ + R+ C++R+K L
Sbjct: 601 WTEEEDEKLREAIAEHGYS----WSKVATNLSCRTDNQCLRRWKRL 642
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +2
Query: 356 EKPWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKE 499
+K WT E + L A++ F + W+ +++ + R+ C R+K+
Sbjct: 495 KKEWTAEEDDQLRTAVELFG---EKDWQSVANVLKGRTGTQCSNRWKK 539
>At3g55730.1 68416.m06191 myb family transcription factor (MYB109)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 399
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 362 PWTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRY 493
PW+ E +L + ++ P W I+ IP RS K C R+
Sbjct: 58 PWSTEEDAVLTKLVRKLG---PRNWSLIARGIPGRSGKSCRLRW 98
>At4g34430.4 68417.m04893 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 986
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +2
Query: 365 WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKEL 502
WT E LL +A++ F E W +I++ + ++K CM + ++
Sbjct: 367 WTDQETLLLLEALEIFK----ENWNEIAEHVATKTKAQCMLHFLQM 408
>At4g34430.3 68417.m04892 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 983
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +2
Query: 365 WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKEL 502
WT E LL +A++ F E W +I++ + ++K CM + ++
Sbjct: 367 WTDQETLLLLEALEIFK----ENWNEIAEHVATKTKAQCMLHFLQM 408
>At4g34430.2 68417.m04891 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 985
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +2
Query: 365 WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKEL 502
WT E LL +A++ F E W +I++ + ++K CM + ++
Sbjct: 367 WTDQETLLLLEALEIFK----ENWNEIAEHVATKTKAQCMLHFLQM 408
>At4g34430.1 68417.m04890 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 985
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +2
Query: 365 WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRYKEL 502
WT E LL +A++ F E W +I++ + ++K CM + ++
Sbjct: 367 WTDQETLLLLEALEIFK----ENWNEIAEHVATKTKAQCMLHFLQM 408
>At2g27650.1 68415.m03351 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF04780:
Protein of unknown function (DUF629), PF04781: Protein
of unknown function (DUF627)
Length = 1106
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = -2
Query: 205 EKSELCKSLALFNTSFADSRLSSINVQCWFKKFATTSHL 89
E+S+L K + F F D ++ +++ W K+++ T HL
Sbjct: 343 ERSKLLKEIKFFLVMFCDLKILPCSIRDWMKRYSVT-HL 380
>At5g40430.1 68418.m04903 myb family transcription factor (MYB22)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 256
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/79 (21%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Frame = +2
Query: 269 KISNHVDNTGISKS-DKLVNGTTTAEIKPEE---KPWTKTEQELLEQAIKTFPVNTPERW 436
+I N +++ + K+ + +T+ +K + K WT++E L++ + P++W
Sbjct: 21 EIMNQLEDDKMKKTYENKKEASTSKYLKKSDITKKRWTESEDIKLKEMVAL----EPKKW 76
Query: 437 EKISDCIPNRSKKDCMKRY 493
K++ R+ K C +R+
Sbjct: 77 TKVAKHFEGRTPKQCRERW 95
>At5g40360.1 68418.m04896 myb family transcription factor (MYB115)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 359
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 365 WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRY 493
WT TE ELL + +K+ + W I+ R K C +R+
Sbjct: 161 WTPTEDELLVRMVKS---KGTKNWTSIAKMFQGRVGKQCRERW 200
>At4g18770.1 68417.m02773 myb family transcription factor (MYB98)
identical to transcription factor (MYB98) GI:15375282
from [Arabidopsis thaliana]
Length = 427
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 365 WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRY 493
WT E +L Q ++ + + +W I+ +P R K C +R+
Sbjct: 220 WTAEEDRVLIQLVEKYGLR---KWSHIAQVLPGRIGKQCRERW 259
>At5g46950.1 68418.m05788 invertase/pectin methylesterase inhibitor
family protein contains Pfam profile PF04043: Plant
invertase/pectin methylesterase inhibitor
Length = 174
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +3
Query: 84 NQRWEVVANFLNQHCTFIDDKRLSAKEVLNKAKDLQSSDFSKSSLKKAANE--EAFDQFK 257
+QR++ + L F D S K L K + D + S+L A N + D FK
Sbjct: 87 DQRYQDIVEDLKLCLGFYKDANDSLKTALANIKS-RDYDGANSNLSAALNAPGDCEDDFK 145
Query: 258 KKRKKFPIT 284
+ KK PIT
Sbjct: 146 EAEKKSPIT 154
>At5g17800.1 68418.m02087 myb family transcription factor (MYB56)
identical to putative transcription factor (MYB56)
GI:3941473 from [Arabidopsis thaliana]
Length = 323
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 365 WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRY 493
W TE L++ + F P+ W IS+ + RS K C R+
Sbjct: 96 WRPTEDAKLKELVAQFG---PQNWNLISNHLLGRSGKSCRLRW 135
>At4g29450.1 68417.m04204 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 863
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = -3
Query: 402 IACSNNSCSVLVQGF---SSGLISAVVVPFTNLSLFE 301
+ CS+N+ + ++ SSGL+ +V+ F NLSL E
Sbjct: 404 VGCSDNNNNHQIKSLNLSSSGLLGPIVLAFRNLSLLE 440
>At3g07740.2 68416.m00935 transcriptional adaptor (ADA2a) identical
to transcriptional adaptor ADA2a [Arabidopsis thaliana]
gi|13591698|gb|AAK31319
Length = 477
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/43 (25%), Positives = 25/43 (58%)
Frame = +2
Query: 365 WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRY 493
W E+ LL +AI T+ W++++D + +++ +C+K +
Sbjct: 40 WNADEEILLLEAIATYGFGN---WKEVADHVGSKTTTECIKHF 79
>At3g07740.1 68416.m00936 transcriptional adaptor (ADA2a) identical
to transcriptional adaptor ADA2a [Arabidopsis thaliana]
gi|13591698|gb|AAK31319
Length = 548
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/43 (25%), Positives = 25/43 (58%)
Frame = +2
Query: 365 WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRY 493
W E+ LL +AI T+ W++++D + +++ +C+K +
Sbjct: 111 WNADEEILLLEAIATYGFGN---WKEVADHVGSKTTTECIKHF 150
>At4g22510.1 68417.m03249 hypothetical protein
Length = 125
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 293 TGISKSDKLVNGTTTAEIKPEEKPWTKTEQELLEQAIKT 409
T I KSD+L T AE+KP++ E L Q +T
Sbjct: 48 TQIPKSDRLRGHTGWAEVKPKKTRLKAVEARLYRQTTET 86
>At1g73410.1 68414.m08499 myb family transcription factor (MYB54)
identical to putative transcription factor (MYB54)
GI:3941471 from [Arabidopsis thaliana]
Length = 243
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 365 WTKTEQELLEQAIKTFPVNTPERWEKISDCIPNRSKKDCMKRY 493
W E E L+ ++ + P W I+ +P RS K C R+
Sbjct: 9 WRPAEDEKLKDLVEQYG---PHNWNAIALKLPGRSGKSCRLRW 48
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,572,541
Number of Sequences: 28952
Number of extensions: 312487
Number of successful extensions: 1038
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1726528800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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