Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120586.Seq
         (806 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P12828 Cluster: Early 40.9 kDa protein; n=5; Nucleopoly...   191   2e-47
UniRef50_O10278 Cluster: Putative early 40.3 kDa protein; n=8; N...   109   1e-22
UniRef50_Q23DM8 Cluster: Kelch motif family protein; n=1; Tetrah...    36   1.2  
UniRef50_P36661 Cluster: Uncharacterized protein yccE; n=10; Ent...    36   1.6  
UniRef50_A0EYZ5 Cluster: Putative uncharacterized protein; n=1; ...    35   2.8  
UniRef50_Q9ZRJ0 Cluster: Retrotransposon Tto1 DNA; n=17; Eukaryo...    35   2.8  
UniRef50_A0Z2C8 Cluster: MaoC-like dehydratase; n=1; marine gamm...    34   3.7  
UniRef50_Q4QJJ0 Cluster: Protein kinase, putative; n=3; Leishman...    33   6.4  
UniRef50_Q16Y10 Cluster: Putative uncharacterized protein; n=1; ...    33   6.4  

>UniRef50_P12828 Cluster: Early 40.9 kDa protein; n=5;
           Nucleopolyhedrovirus|Rep: Early 40.9 kDa protein -
           Autographa californica nuclear polyhedrosis virus
           (AcMNPV)
          Length = 353

 Score =  191 bits (466), Expect = 2e-47
 Identities = 92/98 (93%), Positives = 93/98 (94%)
 Frame = +1

Query: 511 DLVRFALQIDITSAYGVDEYTDNCVKITTAPLSFNVFFVNVRIMKRPFNADRCIKNFSLL 690
           DLVRFALQIDITSA GVDEYTDN VKITTAPLSFNVFFVNVRIMKRPFNADRCIKNFSL 
Sbjct: 155 DLVRFALQIDITSADGVDEYTDNGVKITTAPLSFNVFFVNVRIMKRPFNADRCIKNFSLF 214

Query: 691 GNEYHVLVSSLQRVLNDQLMCLLKTFFTNKFDYKIKRR 804
           GNEYHVLVSSLQRVLNDQLMCLLK  FTNKFDYKI+RR
Sbjct: 215 GNEYHVLVSSLQRVLNDQLMCLLKDIFTNKFDYKIERR 252



 Score =  145 bits (351), Expect = 1e-33
 Identities = 68/68 (100%), Positives = 68/68 (100%)
 Frame = +1

Query: 43  MERLLNQLNLGVLPYITTKDIEDRLRDKIVAKAKLAFIKDCFEAVVCENGGLFVLTGGAA 222
           MERLLNQLNLGVLPYITTKDIEDRLRDKIVAKAKLAFIKDCFEAVVCENGGLFVLTGGAA
Sbjct: 1   MERLLNQLNLGVLPYITTKDIEDRLRDKIVAKAKLAFIKDCFEAVVCENGGLFVLTGGAA 60

Query: 223 VTCHIDDD 246
           VTCHIDDD
Sbjct: 61  VTCHIDDD 68



 Score =  129 bits (312), Expect = 7e-29
 Identities = 57/64 (89%), Positives = 62/64 (96%)
 Frame = +3

Query: 252 QSALKCIDFDYYGLCSKKMFCNLQTNLQKCVDQHYAELDVLTRQIYMSNPLVMLKCYQNG 431
           +SALKCIDFDYYG C+K MFCNLQTNLQKCVDQHYAELDVLTRQ+YMS+PLV+LKCYQNG
Sbjct: 69  RSALKCIDFDYYGFCAK-MFCNLQTNLQKCVDQHYAELDVLTRQVYMSDPLVVLKCYQNG 127

Query: 432 AYRL 443
           AYRL
Sbjct: 128 AYRL 131



 Score = 51.6 bits (118), Expect = 2e-05
 Identities = 21/22 (95%), Positives = 22/22 (100%)
 Frame = +2

Query: 443 NGQIDLHLNRHIKCIKTQYNDE 508
           NGQI+LHLNRHIKCIKTQYNDE
Sbjct: 132 NGQINLHLNRHIKCIKTQYNDE 153


>UniRef50_O10278 Cluster: Putative early 40.3 kDa protein; n=8;
           Nucleopolyhedrovirus|Rep: Putative early 40.3 kDa
           protein - Orgyia pseudotsugata multicapsid polyhedrosis
           virus (OpMNPV)
          Length = 355

 Score =  109 bits (261), Expect = 1e-22
 Identities = 47/97 (48%), Positives = 68/97 (70%)
 Frame = +1

Query: 511 DLVRFALQIDITSAYGVDEYTDNCVKITTAPLSFNVFFVNVRIMKRPFNADRCIKNFSLL 690
           DL+RFALQ+++ +  GVDEY D  V +      FNVFFVN+R MK P   +RC++  ++ 
Sbjct: 157 DLLRFALQVELKALNGVDEYVDQKVIVDRGAAVFNVFFVNIRAMKGPLTMERCVRTLAVF 216

Query: 691 GNEYHVLVSSLQRVLNDQLMCLLKTFFTNKFDYKIKR 801
           G+ Y V+VS LQ V+NDQ+MCLLK  FT+K ++++ R
Sbjct: 217 GDAYRVVVSPLQSVINDQIMCLLKDIFTDKPEFRVAR 253



 Score = 93.1 bits (221), Expect = 7e-18
 Identities = 42/68 (61%), Positives = 51/68 (75%)
 Frame = +1

Query: 43  MERLLNQLNLGVLPYITTKDIEDRLRDKIVAKAKLAFIKDCFEAVVCENGGLFVLTGGAA 222
           M+R+ +Q+  G LPYITT D+EDRLR++I AKA   F K CFEAVV +  GLFVL+GGAA
Sbjct: 1   MDRVASQIYSGALPYITTMDMEDRLRNRIAAKAGAKFFKACFEAVVADKSGLFVLSGGAA 60

Query: 223 VTCHIDDD 246
             CHI DD
Sbjct: 61  TACHIGDD 68



 Score = 54.0 bits (124), Expect = 4e-06
 Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
 Frame = +3

Query: 252 QSALKCIDFDYYGLCSKKM-FCNLQTNLQKCVDQHYAELDVLTRQIYMSNPLVMLKCYQN 428
           ++ LKC+DFDYY    + +    LQ  LQ CV  +   L  L + + M + L ++KC+QN
Sbjct: 69  RNVLKCLDFDYYNATQEWLQLARLQQRLQACVQDNLEILSRLAQSVRMQDDLFVVKCFQN 128

Query: 429 GAY 437
           GA+
Sbjct: 129 GAF 131


>UniRef50_Q23DM8 Cluster: Kelch motif family protein; n=1; Tetrahymena
            thermophila SB210|Rep: Kelch motif family protein -
            Tetrahymena thermophila SB210
          Length = 1372

 Score = 35.9 bits (79), Expect = 1.2
 Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
 Frame = -1

Query: 722  NDDTNT*YS-FPRSEKFLMQRSALKGRFIMRTLTKNTLKDSGAVVILTQLSVYSSTPYAL 546
            N DTN  YS   +S+      S   G F    +++ TLK+S  + I  Q  VY     +L
Sbjct: 898  NQDTNILYSHLIKSDLSEFGGSLANGNFF-NNISQPTLKESAFLNIFGQSGVYYLNLKSL 956

Query: 545  VIS-----ICSANLTKSTHRCTVF--LCILYGGLSAN 456
             ++       S N+TK +H C +F     + GGLS N
Sbjct: 957  ELNHKQPIALSGNITKYSHACNIFDGKVFVSGGLSQN 993


>UniRef50_P36661 Cluster: Uncharacterized protein yccE; n=10;
           Enterobacteriaceae|Rep: Uncharacterized protein yccE -
           Escherichia coli (strain K12)
          Length = 418

 Score = 35.5 bits (78), Expect = 1.6
 Identities = 16/62 (25%), Positives = 35/62 (56%)
 Frame = +1

Query: 487 KNTVQR*VDLVRFALQIDITSAYGVDEYTDNCVKITTAPLSFNVFFVNVRIMKRPFNADR 666
           K T++  VD   + L+ D+ + +GVD  +DN ++  ++ +S++  F   + +    N ++
Sbjct: 248 KKTIEALVDTAFYNLREDVKTLFGVDLQSDNQIQGQSSLMSWSFLFFKKQFIDSCLNNEK 307

Query: 667 CI 672
           CI
Sbjct: 308 CI 309


>UniRef50_A0EYZ5 Cluster: Putative uncharacterized protein; n=1;
           Ecotropis obliqua NPV|Rep: Putative uncharacterized
           protein - Ecotropis obliqua NPV
          Length = 393

 Score = 34.7 bits (76), Expect = 2.8
 Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = +1

Query: 79  LPYITTKDIEDRLRDKIVAKAKLAF---IKDCFEAVVCENGGLFVLTGGAAVTCHIDDDD 249
           LPYI+ K + D + + I+++    F   + DC E ++       ++ GGAA+  H+ DD+
Sbjct: 14  LPYISKKAVNDAMCNYILSQMPKMFYSEVYDCVERILHRQK--CIVKGGAAIAAHLQDDN 71


>UniRef50_Q9ZRJ0 Cluster: Retrotransposon Tto1 DNA; n=17;
            Eukaryota|Rep: Retrotransposon Tto1 DNA - Nicotiana
            tabacum (Common tobacco)
          Length = 1338

 Score = 34.7 bits (76), Expect = 2.8
 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
 Frame = +2

Query: 86   ILRQRILKIACAIKLWLKQSWHLSKIVSKP*FAKTEVYSC*L--EARL*HAISTTTTTKR 259
            IL  RI++   A KLWL Q  ++ K++ +    KT+  SC L    RL    S +T  +R
Sbjct: 1045 ILGMRIMRDREAKKLWLSQEKYIEKVLQRFNMEKTKAVSCPLANHFRLSTKQSPSTDDER 1104

Query: 260  IKMHR 274
             KM R
Sbjct: 1105 RKMER 1109


>UniRef50_A0Z2C8 Cluster: MaoC-like dehydratase; n=1; marine gamma
           proteobacterium HTCC2080|Rep: MaoC-like dehydratase -
           marine gamma proteobacterium HTCC2080
          Length = 148

 Score = 34.3 bits (75), Expect = 3.7
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
 Frame = +3

Query: 597 SPAVFQRVFCQRAHYETTLQRGPLHQ----KFFASWKRISRVGVVVATRFERPVNVLAED 764
           +P    RV+ Q      T+Q+GPL+Q    +FF +W  + +   + +T      NV  ED
Sbjct: 43  NPLHLDRVYAQERGLPDTVQQGPLNQAYLYEFFTNW--LHQPWDLASTEIRFSANVFPED 100

Query: 765 IFH 773
           I H
Sbjct: 101 ILH 103


>UniRef50_Q4QJJ0 Cluster: Protein kinase, putative; n=3;
           Leishmania|Rep: Protein kinase, putative - Leishmania
           major
          Length = 432

 Score = 33.5 bits (73), Expect = 6.4
 Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
 Frame = +2

Query: 545 QAHTASTSIPTTA---LK*PQPRCLSTCF-LSTCAL*NDPSTRTAA 670
           +  TASTS+P T+   L+ P  RC+S  F  +T A  N  ST TAA
Sbjct: 376 EEETASTSVPVTSRSGLRTPNSRCVSVPFGTNTSAFSNSSSTTTAA 421


>UniRef50_Q16Y10 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 606

 Score = 33.5 bits (73), Expect = 6.4
 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
 Frame = +1

Query: 577 NCVKITTAPLSFNVFFVNVRIMKRPFNADRCIKNFSLLGNEYHVLVSSLQRVLND----Q 744
           +C     AP+S   + +NV      F  + C K+F +LG+  H  V+SL  V  D    Q
Sbjct: 524 SCGLFRNAPVSLRKYSLNVD-RSLYFAEEACKKDFEILGHIKHFAVASLMAVCFDGSLNQ 582

Query: 745 LMCLLKTFFTNKFDY 789
              +L+ F    FDY
Sbjct: 583 ATLVLEPFDFTLFDY 597


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 732,283,463
Number of Sequences: 1657284
Number of extensions: 13923407
Number of successful extensions: 36684
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 35243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36675
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69554636255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)