Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120585.Seq
         (824 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0417 - 28796121-28796743,28796829-28796925,28797010-287970...    31   1.5  
04_01_0316 + 4251465-4251590,4251664-4251719,4252973-4253087,425...    30   2.6  
09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579,397...    29   5.9  
02_05_1326 - 35712102-35712473,35712608-35712720,35712944-357148...    29   5.9  

>02_05_0417 - 28796121-28796743,28796829-28796925,28797010-28797093,
            28797173-28797234,28797316-28797460,28797542-28797961,
            28798041-28798090,28798163-28798349,28798426-28798680,
            28798785-28798953,28799044-28799177,28799291-28799446,
            28799534-28799719,28799798-28799962,28800074-28800190,
            28800553-28800762,28800850-28801049,28801135-28801405,
            28801481-28801547,28801644-28801942,28802425-28802991
          Length = 1487

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 22/84 (26%), Positives = 34/84 (40%)
 Frame = +2

Query: 416  TGKYAPAVKMDTNYGVIEELNKKLAFASESLPRPTKKLYILNNALVTANAGLVQANTMLN 595
            T K APA        V+EE+ K    +S S P P KK+  +  +     +G V       
Sbjct: 1359 TRKRAPAQGKSMRQKVMEEMFKPTEDSSTSAPSPEKKVRKMRASPFHKKSGSVLQRASTA 1418

Query: 596  EARRETAQLANRMADIAQDVIAKP 667
                E  + ++     A+ V A+P
Sbjct: 1419 STSTEETESSSPSGSSAEPVAARP 1442


>04_01_0316 +
           4251465-4251590,4251664-4251719,4252973-4253087,
           4253174-4253417,4254189-4254325,4255006-4255065,
           4255336-4255460,4256021-4256048,4256267-4256336,
           4256513-4256565,4256966-4257025,4257498-4257544,
           4257617-4257741,4258572-4258686,4258778-4258826,
           4260415-4260471,4261126-4261209,4261363-4261442,
           4262005-4262094,4262252-4262375
          Length = 614

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +1

Query: 49  VKIGEFKFGEDTFTLRYVLEQGNLQVKFVAKDIASS 156
           V+ G FK  ED   +   L++ N++ +FVA ++ +S
Sbjct: 332 VRCGNFKISEDYQAVNVTLKKDNMRTEFVAAEVDNS 367


>09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579,
            3973665-3973982,3974565-3974763,3974937-3975202,
            3975288-3975574,3976714-3977818,3977900-3978046,
            3978146-3978226,3978315-3978540,3978622-3978761,
            3979539-3979645,3979739-3979841
          Length = 3638

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
 Frame = -3

Query: 711  PNAHTANECSSWGLLGL---AITSCAMSAMRLASCAVSRRASFNIVLACTNPAL---AVT 550
            P++   N C+   L GL     T  A    +LAS AVS R  F++ LA    +L   AV 
Sbjct: 2988 PDSELHNLCNILALEGLPDKVYTLAAEVVKKLASVAVSHRKFFSMELASAAQSLSSSAVE 3047

Query: 549  NALFKMYNFFVGLGRLSLANANFL 478
              +       +GL   S+A A  L
Sbjct: 3048 ELVTLKNTQMLGLNSCSMAGAAIL 3071


>02_05_1326 - 35712102-35712473,35712608-35712720,35712944-35714857,
            35714942-35715135,35715237-35716786,35716946-35717049,
            35717258-35717399,35717692-35717910
          Length = 1535

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = +1

Query: 169  NCKQAVIVNVDKKYKTTY-SESGSIPYTP 252
            N +QA I+  D KY  ++ ++ GS+PY P
Sbjct: 1270 NSEQAAIITEDVKYTESFLNKPGSLPYAP 1298


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,989,833
Number of Sequences: 37544
Number of extensions: 504938
Number of successful extensions: 1402
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1402
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)