Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120583.Seq
(629 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O10372 Cluster: Occlusion-derived virus envelope protei... 71 2e-11
UniRef50_Q462F3 Cluster: Orf13; n=14; Nucleopolyhedrovirus|Rep: ... 64 3e-09
UniRef50_O10370 Cluster: Uncharacterized 55.8 kDa protein; n=13;... 52 9e-06
UniRef50_P41701 Cluster: Occlusion-derived virus envelope protei... 52 1e-05
UniRef50_Q8QL68 Cluster: ODV-E18; n=9; Nucleopolyhedrovirus|Rep:... 43 0.007
UniRef50_Q9YMV5 Cluster: LdOrf-odv-e18 peptide; n=5; Nucleopolyh... 41 0.021
UniRef50_Q0ILA6 Cluster: Odv-e27; n=2; Nucleopolyhedrovirus|Rep:... 40 0.065
UniRef50_Q1HH82 Cluster: Odv-e18; n=1; Antheraea pernyi nucleopo... 38 0.26
UniRef50_O10371 Cluster: Occlusion-derived virus envelope protei... 37 0.35
UniRef50_Q0N488 Cluster: P49; n=15; Nucleopolyhedrovirus|Rep: P4... 33 4.3
UniRef50_Q10426 Cluster: Silencing protein rik1; n=1; Schizosacc... 33 5.7
>UniRef50_O10372 Cluster: Occlusion-derived virus envelope protein
E27; n=12; Nucleopolyhedrovirus|Rep: Occlusion-derived
virus envelope protein E27 - Orgyia pseudotsugata
multicapsid polyhedrosis virus (OpMNPV)
Length = 297
Score = 70.9 bits (166), Expect = 2e-11
Identities = 33/48 (68%), Positives = 39/48 (81%)
Frame = +3
Query: 486 KNLRIGRIDLKNLSSLESYETLKIKLALSKYMAMLSTPEMTQPLLEIF 629
K + DLKNLSSLES+E K+KLALSKYMAM++T EMTQPLLE+F
Sbjct: 24 KTYDLNEFDLKNLSSLESFENTKVKLALSKYMAMINTLEMTQPLLEVF 71
Score = 46.4 bits (105), Expect = 6e-04
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = +1
Query: 418 MKRVKCNKVRTVTEIVNSDEKIQKTYELAE 507
MKRV+CNKVRTVTE+ ++ KI+KTY+L E
Sbjct: 1 MKRVRCNKVRTVTEVKPNNAKIRKTYDLNE 30
>UniRef50_Q462F3 Cluster: Orf13; n=14; Nucleopolyhedrovirus|Rep:
Orf13 - Trichoplusia ni SNPV
Length = 296
Score = 64.1 bits (149), Expect = 3e-09
Identities = 30/48 (62%), Positives = 38/48 (79%)
Frame = +3
Query: 486 KNLRIGRIDLKNLSSLESYETLKIKLALSKYMAMLSTPEMTQPLLEIF 629
K + D+KNL+SLESY+TLKIKL + KYMAML+T ++TQPLL IF
Sbjct: 27 KEYDLTEFDVKNLNSLESYDTLKIKLVIVKYMAMLNTLQLTQPLLTIF 74
Score = 46.4 bits (105), Expect = 6e-04
Identities = 22/33 (66%), Positives = 26/33 (78%), Gaps = 3/33 (9%)
Frame = +1
Query: 418 MKRVKCN---KVRTVTEIVNSDEKIQKTYELAE 507
MKR KC KVRTVTEI+NSD+K+QK Y+L E
Sbjct: 1 MKRFKCQSTPKVRTVTEIINSDDKLQKEYDLTE 33
>UniRef50_O10370 Cluster: Uncharacterized 55.8 kDa protein; n=13;
Nucleopolyhedrovirus|Rep: Uncharacterized 55.8 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 484
Score = 52.4 bits (120), Expect = 9e-06
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = +2
Query: 2 ESSSELKSLRDLNPWVQNTLLKLLIPD 82
ES+SELKSLRDLNPWVQNTLL+LLI D
Sbjct: 445 ESTSELKSLRDLNPWVQNTLLELLIVD 471
>UniRef50_P41701 Cluster: Occlusion-derived virus envelope protein
E18; n=7; Nucleopolyhedrovirus|Rep: Occlusion-derived
virus envelope protein E18 - Autographa californica
nuclear polyhedrosis virus (AcMNPV)
Length = 62
Score = 52.0 bits (119), Expect = 1e-05
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = +2
Query: 332 FMNPLNATMRANPFMNTPQRQML 400
F+NPLNATMRANPFMNTPQRQML
Sbjct: 40 FVNPLNATMRANPFMNTPQRQML 62
>UniRef50_Q8QL68 Cluster: ODV-E18; n=9; Nucleopolyhedrovirus|Rep:
ODV-E18 - Mamestra configurata NPV-A
Length = 83
Score = 42.7 bits (96), Expect = 0.007
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +2
Query: 332 FMNPLNATMRANPFMNTPQRQML 400
F+NPLNATMRANPF+N QR ML
Sbjct: 61 FVNPLNATMRANPFVNPAQRNML 83
>UniRef50_Q9YMV5 Cluster: LdOrf-odv-e18 peptide; n=5;
Nucleopolyhedrovirus|Rep: LdOrf-odv-e18 peptide -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 88
Score = 41.1 bits (92), Expect = 0.021
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +2
Query: 332 FMNPLNATMRANPFMNTPQRQML 400
+ NPLNATMRANPF+N QR ML
Sbjct: 66 YTNPLNATMRANPFVNNAQRSML 88
>UniRef50_Q0ILA6 Cluster: Odv-e27; n=2; Nucleopolyhedrovirus|Rep:
Odv-e27 - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 284
Score = 39.5 bits (88), Expect = 0.065
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +3
Query: 486 KNLRIGRIDLKNLSSLESYETLKIKLALSKYMAMLSTPEMTQPLLEIF 629
K + ++ KNL+SL SY+ ++ L+KY+AML E +Q L+ F
Sbjct: 22 KEFELDELNDKNLNSLVSYDNFNTRMVLAKYIAMLHMLETSQSLIATF 69
Score = 37.5 bits (83), Expect = 0.26
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +1
Query: 436 NKVRTVTEIVNSDEKIQKTYELAEL 510
NKVRTVTEIVN +K+ K +EL EL
Sbjct: 5 NKVRTVTEIVNGHDKLTKEFELDEL 29
>UniRef50_Q1HH82 Cluster: Odv-e18; n=1; Antheraea pernyi
nucleopolyhedrovirus|Rep: Odv-e18 - Antheraea pernyi
nuclear polyhedrosis virus (ApNPV)
Length = 68
Score = 37.5 bits (83), Expect = 0.26
Identities = 20/52 (38%), Positives = 24/52 (46%)
Frame = +3
Query: 99 MIYXXXXXXXXXXXDVQSANYLNRLTPNMFLTXXXXXXXXXXXXMFVQSNSN 254
MIY D S NYLN+LTPN FL +F+QS+SN
Sbjct: 1 MIYTDPTTGATTNTDATSNNYLNKLTPNTFLIILAVVVIIALIVIFMQSSSN 52
>UniRef50_O10371 Cluster: Occlusion-derived virus envelope protein
E18; n=7; Nucleopolyhedrovirus|Rep: Occlusion-derived
virus envelope protein E18 - Orgyia pseudotsugata
multicapsid polyhedrosis virus (OpMNPV)
Length = 85
Score = 37.1 bits (82), Expect = 0.35
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = +3
Query: 99 MIYXXXXXXXXXXXDVQSANYLNRLTPNMFLTXXXXXXXXXXXXMFVQSNSN 254
MIY D NYLNRLTPN FL +F+QS+SN
Sbjct: 1 MIYTDPATGATTNTDAAGNNYLNRLTPNTFLIILAVVVIVALIIIFMQSSSN 52
Score = 34.7 bits (76), Expect = 1.9
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +2
Query: 341 PLNATMRANPFMNTPQR 391
PLN TMRANPF+ TPQR
Sbjct: 68 PLNTTMRANPFVATPQR 84
>UniRef50_Q0N488 Cluster: P49; n=15; Nucleopolyhedrovirus|Rep: P49 -
Clanis bilineata nucleopolyhedrosis virus
Length = 498
Score = 33.5 bits (73), Expect = 4.3
Identities = 17/23 (73%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Frame = +2
Query: 11 SELKSLRDL-NPWVQNTLLKLLI 76
S KSL +L N WVQNTLLKLLI
Sbjct: 447 SSFKSLHELKNSWVQNTLLKLLI 469
>UniRef50_Q10426 Cluster: Silencing protein rik1; n=1;
Schizosaccharomyces pombe|Rep: Silencing protein rik1 -
Schizosaccharomyces pombe (Fission yeast)
Length = 1040
Score = 33.1 bits (72), Expect = 5.7
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = -3
Query: 546 FHSFLNCLDFLNQFGQFVGFLDLFIAVYNFGDRSNF-VAFDTFHFYTLIYNICL*GV 379
F S ++CLDF QF VGF + + F D S+ AF T + +L NI L GV
Sbjct: 504 FESEISCLDFSAQFQIGVGFWSKQVMILTFSDNSSISCAFQT-NVPSLPRNIILEGV 559
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 509,144,636
Number of Sequences: 1657284
Number of extensions: 8190022
Number of successful extensions: 17848
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17841
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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