Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120582.Seq
(727 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 105 6e-24
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 73 3e-14
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 71 1e-13
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 69 9e-13
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 68 2e-12
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 62 8e-11
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 56 7e-09
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 53 5e-08
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 36 0.004
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 34 0.018
SPAC17A5.06 |ptr8||transcription factor TFIIH complex ERCC-3 sub... 28 1.6
SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase Snf21|... 26 4.8
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 26 6.3
SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit Pst... 26 6.3
SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 8.3
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 25 8.3
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 25 8.3
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 105 bits (252), Expect = 6e-24
Identities = 53/73 (72%), Positives = 59/73 (80%)
Frame = +2
Query: 509 ASTAMSSKLIHQQKDHFSKIVVDAVLSLDTPLLPLDMIGIKKVPGGALEDSFLVPGVAFK 688
ASTAM+SKLI F+K+VVDAVL+LD L +MIGIKKVPGGA+EDS LV GVAFK
Sbjct: 163 ASTAMNSKLIRSNSTFFTKMVVDAVLTLDQEDLNENMIGIKKVPGGAMEDSLLVKGVAFK 222
Query: 689 KTFSYAGFEMQPK 727
KTFSYAGFE QPK
Sbjct: 223 KTFSYAGFEQQPK 235
Score = 103 bits (248), Expect = 2e-23
Identities = 48/71 (67%), Positives = 58/71 (81%)
Frame = +1
Query: 43 QPQILLLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDG 222
Q +++L+EGTD +QG+ QL+SNINAC V D +RTTLGP G DKL+VD G+ VISNDG
Sbjct: 7 QIPVIVLKEGTDDSQGRGQLLSNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDG 66
Query: 223 ATIMKLLDIVH 255
ATIMKLLDIVH
Sbjct: 67 ATIMKLLDIVH 77
Score = 101 bits (243), Expect = 8e-23
Identities = 49/84 (58%), Positives = 64/84 (76%)
Frame = +3
Query: 255 PAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAI 434
PAAKTLVDIA++QDAEVGDGTTSVV+ AGE+L+ + FVE+GV ++IR R A++LA+
Sbjct: 78 PAAKTLVDIARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLIIRGYRKAAQLAV 137
Query: 435 EKIKEQAVKIDNKSPEEQRDLLLK 506
KIKE A+ +D + RDLL K
Sbjct: 138 NKIKEIAIHLDLSDEGKLRDLLTK 161
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 73.3 bits (172), Expect = 3e-14
Identities = 33/71 (46%), Positives = 51/71 (71%)
Frame = +3
Query: 255 PAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAI 434
PAAK+++++A++QD EVGDGTTSV+ILAGEIL P ++ +HP V+IR+ + A A+
Sbjct: 73 PAAKSMIELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSFKQALEDAL 132
Query: 435 EKIKEQAVKID 467
I E + ++
Sbjct: 133 SIIDEITLPVN 143
Score = 57.2 bits (132), Expect = 2e-09
Identities = 24/72 (33%), Positives = 43/72 (59%)
Frame = +1
Query: 40 MQPQILLLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISND 219
MQ + ++ ++ G +SNI A + V D +RT LGPR M K+++D G +++ND
Sbjct: 1 MQSPVFVMNTNGNRQVGHKAQMSNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTND 60
Query: 220 GATIMKLLDIVH 255
G I++ +++ H
Sbjct: 61 GHAILREIEVAH 72
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 71.3 bits (167), Expect = 1e-13
Identities = 32/71 (45%), Positives = 50/71 (70%)
Frame = +3
Query: 255 PAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAI 434
PAAK LVD++ +QD E GDGTTSVVILAG +L + +++G+HP V+ + + A+ +
Sbjct: 73 PAAKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTV 132
Query: 435 EKIKEQAVKID 467
+ +KE A+ I+
Sbjct: 133 DCMKENALAIE 143
Score = 68.9 bits (161), Expect = 7e-13
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
Frame = +1
Query: 79 QTQGKPQLV--SNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIV 252
Q + KPQ V SNI A + V DA+RT+LGP+GMDK+I G+ +++NDGATI+K L ++
Sbjct: 12 QDREKPQEVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVL 71
Query: 253 HLPLRLLWTLQS 288
H ++L L +
Sbjct: 72 HPAAKMLVDLSA 83
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 68.5 bits (160), Expect = 9e-13
Identities = 35/73 (47%), Positives = 50/73 (68%)
Frame = +3
Query: 258 AAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIE 437
AAK LV+I+K QD EVGDGTTSV + A E+L++ + V +HP+V+I R A++ AI+
Sbjct: 76 AAKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIIDGYRIATKTAID 135
Query: 438 KIKEQAVKIDNKS 476
++ A IDN S
Sbjct: 136 ALR--ASSIDNSS 146
Score = 57.2 bits (132), Expect = 2e-09
Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = +2
Query: 491 RSPIE-VASTAMSSKLIHQQKDHFSKIVVDAVLSLDTPLLPLDMIGIKKVPGGALEDSFL 667
RS +E +A T +SSK++ Q K+HF+++ VDAVL L LD I I K+ GG L+DSFL
Sbjct: 152 RSDLENIARTTLSSKILSQNKNHFAQLAVDAVLRLKGS-TNLDNIQIIKILGGKLDDSFL 210
Query: 668 VPGVAFKKT 694
G KT
Sbjct: 211 DEGFILNKT 219
Score = 49.6 bits (113), Expect = 4e-07
Identities = 25/80 (31%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +1
Query: 58 LLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDH-NGKAVISNDGATIM 234
+ E Q +G+ +S+ V D V++TLGP+GMDK++ + +G V++NDGATI+
Sbjct: 8 IFNESGIQERGENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGATIL 67
Query: 235 KLLDIVHLPLRLLWTLQSLK 294
K + + + ++L + ++
Sbjct: 68 KSIALDNAAAKVLVNISKVQ 87
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 67.7 bits (158), Expect = 2e-12
Identities = 31/61 (50%), Positives = 42/61 (68%)
Frame = +3
Query: 255 PAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAI 434
PA K LV++A+ QD EVGDGTTSVVI+A E+L+R V+ +HP +I R A R A+
Sbjct: 75 PAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAV 134
Query: 435 E 437
+
Sbjct: 135 K 135
Score = 55.6 bits (128), Expect = 7e-09
Identities = 23/60 (38%), Positives = 39/60 (65%)
Frame = +1
Query: 76 DQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIVH 255
++ G+ N+ A + + V+++LGP G+DK++VD G ++NDGATI+ LLD+ H
Sbjct: 15 EKISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEH 74
Score = 46.4 bits (105), Expect = 4e-06
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Frame = +2
Query: 488 KRSPIEVASTAMSSKLIHQQKDHFSKIVVDAVLSLDT------PLLPLDMIGIKKVPGGA 649
K S I VA T+MSSK+I D FS + VDA+LS+ T P+ + I K G +
Sbjct: 150 KESLINVAKTSMSSKIIGNDSDFFSTMAVDAMLSVKTSNSKGETRYPVKAVNILKAHGKS 209
Query: 650 LEDSFLVPGVAFKKTFS 700
+S LV G A T +
Sbjct: 210 SRESVLVKGYALNCTIA 226
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 62.1 bits (144), Expect = 8e-11
Identities = 30/79 (37%), Positives = 51/79 (64%)
Frame = +3
Query: 261 AKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEK 440
AK LV ++KSQD E+GDGTT VV+LAG +L++ + +++G+HP + A ++A++
Sbjct: 90 AKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAVKH 149
Query: 441 IKEQAVKIDNKSPEEQRDL 497
+ + +D SPE +L
Sbjct: 150 LDAISDVVD-FSPENTTNL 167
Score = 57.6 bits (133), Expect = 2e-09
Identities = 26/70 (37%), Positives = 46/70 (65%)
Frame = +1
Query: 64 REGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLL 243
+E + G + S+I A + V + VRT+LGPRG+DK+++ +G+ ++NDGATI+ +
Sbjct: 24 QEKKRRLHGIDAVKSHILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQM 83
Query: 244 DIVHLPLRLL 273
++ H +LL
Sbjct: 84 EVEHQIAKLL 93
Score = 46.0 bits (104), Expect = 6e-06
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Frame = +2
Query: 509 ASTAMSSKLIHQQKDHFSKIVVDAVLS---LDTPLLPLDMIGIKKVPGGALEDSFLVPGV 679
A T++ SK++ + DHF+ I VDAVLS L + ++I + GG+++D+ LV GV
Sbjct: 171 AKTSLGSKVVSKAHDHFANIAVDAVLSVADLQRKDVDFELIKVDGKVGGSVDDTKLVKGV 230
Query: 680 AFKKTFSY 703
K S+
Sbjct: 231 VVDKDMSH 238
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 55.6 bits (128), Expect = 7e-09
Identities = 26/73 (35%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +1
Query: 58 LLREGTDQTQG-KPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIM 234
L REG QG + ++ N NA + + + RT+LGP G +K++V+H + ++ND ATI+
Sbjct: 13 LFREGYRIMQGVEDAVIRNCNAIRELSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATII 72
Query: 235 KLLDIVHLPLRLL 273
+ L+++H +L+
Sbjct: 73 RELEVIHPAAKLV 85
Score = 44.8 bits (101), Expect = 1e-05
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +3
Query: 255 PAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAI 434
PAAK +VD + Q+ E+GD VV+ GE+L + + + G+ P + + A +
Sbjct: 80 PAAKLVVDATQQQENELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTM 139
Query: 435 EKIKE-QAVKIDNKSPEEQ 488
E ++E A KI+ E++
Sbjct: 140 EVLEEICADKIETVESEKE 158
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 52.8 bits (121), Expect = 5e-08
Identities = 23/62 (37%), Positives = 37/62 (59%)
Frame = +3
Query: 249 RSPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRL 428
++P A + A +QD GDGTTSV +L GE+LK+ + ++ EG+HP ++ A
Sbjct: 68 QNPTASCIAKAATAQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLAKNE 127
Query: 429 AI 434
A+
Sbjct: 128 AL 129
Score = 36.3 bits (80), Expect = 0.004
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = +1
Query: 58 LLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMK 237
LL + Q L NI+A + D +++ LGP G K++VD G ++ DG ++
Sbjct: 4 LLNPKAESIQRAQALQVNISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLT 63
Query: 238 LLDI 249
+ I
Sbjct: 64 EMQI 67
Score = 35.9 bits (79), Expect = 0.006
Identities = 19/62 (30%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Frame = +2
Query: 500 IEVASTAMSSKLIHQQKDHFSKIVVDAVLSLDTPLLPLD--MIGIKKVPGGALEDSFLVP 673
+ VA T++S+K+ + + + VVDA+L++ P P+D M+ I K+ + D+ L+
Sbjct: 147 LNVAKTSLSTKISSKVVESLAPAVVDAILTIRRPDEPIDLHMVEIMKMQNRSASDTQLIR 206
Query: 674 GV 679
G+
Sbjct: 207 GL 208
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 36.3 bits (80), Expect = 0.004
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 620 IGIKKVPGGALEDSFLVPGVAFKKTFS 700
+ IKK+PGG+++D FLV GV F K S
Sbjct: 525 VKIKKIPGGSIQDCFLVNGVLFSKKAS 551
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 34.3 bits (75), Expect = 0.018
Identities = 23/80 (28%), Positives = 37/80 (46%)
Frame = +3
Query: 246 YRSPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASR 425
+ + A+ + D+A + GDGTT+ +L I V G +P L R ++ A
Sbjct: 97 FENLGARLVQDVASKTNEVAGDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQLAVD 156
Query: 426 LAIEKIKEQAVKIDNKSPEE 485
+E + QA K D + EE
Sbjct: 157 NVVEFL--QANKRDITTSEE 174
Score = 30.3 bits (65), Expect = 0.29
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 139 AVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDI 249
AV TLGP+G + LI G I+ DG T+ + + +
Sbjct: 57 AVSVTLGPKGRNVLIDQPFGSPKITKDGVTVARSVSL 93
>SPAC17A5.06 |ptr8||transcription factor TFIIH complex ERCC-3
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 804
Score = 27.9 bits (59), Expect = 1.6
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 130 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLL-DIVHLPLRLLWTLQSLK 294
+VD +R G KL++ N + S D + + LL D V PLR+ ++ QS K
Sbjct: 168 IVDFIRACTVSYGKVKLVLKKNRYFIESGDASVLRLLLRDPVIGPLRIDYSTQSSK 223
>SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase
Snf21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1199
Score = 26.2 bits (55), Expect = 4.8
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 372 EEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLK 506
E+ V +L RA +L I+ QA K DNKS E+R+ L+
Sbjct: 863 EKSVEENILARA---QYKLDIDGKVIQAGKFDNKSTPEEREAFLR 904
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 25.8 bits (54), Expect = 6.3
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 357 LKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLK 506
L+ E+ + +L RA +L ++ QA K DNKS E+R+ L+
Sbjct: 1309 LRLITEKSIEENILSRA---QYKLDLDGKVIQAGKFDNKSTPEEREAFLR 1355
>SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit
Pst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1075
Score = 25.8 bits (54), Expect = 6.3
Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -1
Query: 709 ASVTESFL-ESHTRYQERIFKSSTGNLLDSNHVERQKWSVQRQDSINNNLREV 554
AS F+ + T Y+E + K H+E W+++ I N + E+
Sbjct: 375 ASEESGFIVQRKTPYEEAMTKLEEERYEFDRHIEATSWTIKSLKKIQNRINEL 427
>SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 25.4 bits (53), Expect = 8.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 634 LLDSNHVERQKWSVQRQDSINNNLREVI 551
L DSNHV+ QK +DS N L +++
Sbjct: 56 LFDSNHVDGQKGDSVLRDSANAPLTDLM 83
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3
Query: 486 QRDLLLKWHQQRCHRN 533
+RDLLL+ HQQ+ HRN
Sbjct: 116 RRDLLLR-HQQKIHRN 130
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 25.4 bits (53), Expect = 8.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 168 DGQADCRSQWKGGYI 212
DG+ +C S+WK Y+
Sbjct: 555 DGKVECNSKWKSWYV 569
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,020,354
Number of Sequences: 5004
Number of extensions: 61510
Number of successful extensions: 209
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 207
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 341222980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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