Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120581.Seq
         (801 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    26   0.30 
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    26   0.30 
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    25   0.70 
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    25   0.70 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   0.70 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   0.70 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   5.0  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   6.5  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = -3

Query: 586 RTVAIQFFIYLIKYIV 539
           R V++QFF+Y+I YI+
Sbjct: 133 RNVSVQFFVYVILYIL 148


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = -3

Query: 586 RTVAIQFFIYLIKYIV 539
           R V++QFF+Y+I YI+
Sbjct: 133 RNVSVQFFVYVILYIL 148


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 25.0 bits (52), Expect = 0.70
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +2

Query: 539 NDIFNEIDKELNGNCPFIKFIQRDYIFDAQFPPDLLDLLNEYMTKSSIM 685
           ND  +   KE+ G   +I  +  D      F P+ L LL +YM K+  +
Sbjct: 140 NDELSAHSKEIRGENTYILALDGDI----DFQPEALHLLVDYMKKNKTL 184


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 25.0 bits (52), Expect = 0.70
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +2

Query: 539 NDIFNEIDKELNGNCPFIKFIQRDYIFDAQFPPDLLDLLNEYMTKSSIM 685
           ND  +   KE+ G   +I  +  D      F P+ L LL +YM K+  +
Sbjct: 454 NDELSAHSKEIRGENTYILALDGDI----DFQPEALHLLVDYMKKNKTL 498


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 25.0 bits (52), Expect = 0.70
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +2

Query: 539 NDIFNEIDKELNGNCPFIKFIQRDYIFDAQFPPDLLDLLNEYMTKSSIM 685
           ND  +   KE+ G   +I  +  D      F P+ L LL +YM K+  +
Sbjct: 687 NDELSAHSKEIRGENTYILALDGDI----DFQPEALHLLVDYMKKNKTL 731


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 25.0 bits (52), Expect = 0.70
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +2

Query: 539 NDIFNEIDKELNGNCPFIKFIQRDYIFDAQFPPDLLDLLNEYMTKSSIM 685
           ND  +   KE+ G   +I  +  D      F P+ L LL +YM K+  +
Sbjct: 687 NDELSAHSKEIRGENTYILALDGDI----DFQPEALHLLVDYMKKNKTL 731


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 13/54 (24%), Positives = 25/54 (46%)
 Frame = -3

Query: 616 YVVALNKLDKRTVAIQFFIYLIKYIVGFSGHDFSAVTTVYFNLNSGRPL*KFFS 455
           Y+V L   D         + + +Y +G S   +   TT++   +S  P+ +FF+
Sbjct: 123 YMVLLLLFDAYLWISSVGVRMFQYYIGRSFTYYVCNTTIFLIFHSVLPIKRFFT 176


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -3

Query: 463 FFSINIELLILRVFALEGCGGSI 395
           ++ I+  LLI+R+ ++  CG S+
Sbjct: 196 YYLISFALLIMRLISVCLCGASV 218


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,990
Number of Sequences: 336
Number of extensions: 4249
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)