Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120581.Seq
(801 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 25 0.82
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 25 1.1
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 5.8
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 5.8
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 5.8
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 5.8
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 5.8
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 5.8
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 5.8
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 5.8
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 5.8
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 5.8
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 5.8
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 25.0 bits (52), Expect = 0.82
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 195 LAKFSVQESHHFTRIGRKQVRGVHVRA 115
L +F E+HH R GR+Q R + + A
Sbjct: 72 LLRFENPETHHPIRHGRRQSRSMDLNA 98
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 24.6 bits (51), Expect = 1.1
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -2
Query: 86 SKMSTVVRLHTNRNCGFTN 30
S ST+VR H N C TN
Sbjct: 335 STKSTIVRNHLNSTCSVTN 353
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1
Query: 178 YAEFGKVFKNKIFVNINNYGCVLAGRPVFC 267
Y + K NK++ NIN + PV+C
Sbjct: 98 YNNYNKHNYNKLYYNINYIEQIPIPVPVYC 127
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1
Query: 178 YAEFGKVFKNKIFVNINNYGCVLAGRPVFC 267
Y + K NK++ NIN + PV+C
Sbjct: 98 YNNYNKHNYNKLYYNINYIEQIPIPVPVYC 127
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1
Query: 178 YAEFGKVFKNKIFVNINNYGCVLAGRPVFC 267
Y + K NK++ NIN + PV+C
Sbjct: 98 YNNYNKHNYNKLYYNINYIEQIPIPVPVYC 127
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1
Query: 178 YAEFGKVFKNKIFVNINNYGCVLAGRPVFC 267
Y + K NK++ NIN + PV+C
Sbjct: 98 YNNYNKHNYNKLYYNINYIEQIPIPVPVYC 127
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1
Query: 178 YAEFGKVFKNKIFVNINNYGCVLAGRPVFC 267
Y + K NK++ NIN + PV+C
Sbjct: 98 YNNYNKHNYNKLYYNINYIEQIPIPVPVYC 127
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1
Query: 178 YAEFGKVFKNKIFVNINNYGCVLAGRPVFC 267
Y + K NK++ NIN + PV+C
Sbjct: 98 YNNYNKHNYNKLYYNINYIEQIPIPVPVYC 127
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1
Query: 178 YAEFGKVFKNKIFVNINNYGCVLAGRPVFC 267
Y + K NK++ NIN + PV+C
Sbjct: 98 YNNYNKHNYNKLYYNINYIEQIPIPVPVYC 127
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1
Query: 178 YAEFGKVFKNKIFVNINNYGCVLAGRPVFC 267
Y + K NK++ NIN + PV+C
Sbjct: 98 YNNYNKHNYNKLYYNINYIEQIPIPVPVYC 127
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1
Query: 178 YAEFGKVFKNKIFVNINNYGCVLAGRPVFC 267
Y + K NK++ NIN + PV+C
Sbjct: 98 YNNYNKHNYNKLYYNINYIEQIPIPVPVYC 127
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1
Query: 178 YAEFGKVFKNKIFVNINNYGCVLAGRPVFC 267
Y + K NK++ NIN + PV+C
Sbjct: 331 YNNYNKHNYNKLYYNINYIEQIPIPVPVYC 360
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1
Query: 178 YAEFGKVFKNKIFVNINNYGCVLAGRPVFC 267
Y + K NK++ NIN + PV+C
Sbjct: 331 YNNYNKHNYNKLYYNINYIEQIPIPVPVYC 360
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,392
Number of Sequences: 438
Number of extensions: 4861
Number of successful extensions: 27
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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