Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120578X.Seq
         (584 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    24   1.1  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    24   1.1  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   3.3  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   3.3  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   7.7  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = -1

Query: 461 LNPFNQFFCMTTKS*YLRTVFLFSKIQ 381
           L+P+ +F C++T+  Y +   L+ KI+
Sbjct: 265 LSPYLRFGCLSTRLFYYQLTDLYKKIK 291


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 81  VPFSTCRLSIPNRYYKLFRFQFSEP 155
           +P S   +++PN  Y +FRF+   P
Sbjct: 640 LPPSKDTIAVPNNGYVIFRFRADNP 664


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 266 STKNIS*LDYRSHYRSDGSNVTKE 195
           S K ++ LD    Y+S+G+N+  E
Sbjct: 263 SRKRLAMLDLLLKYKSEGANIDDE 286


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 266 STKNIS*LDYRSHYRSDGSNVTKE 195
           S K ++ LD    Y+S+G+N+  E
Sbjct: 263 SRKRLAMLDLLLKYKSEGANIDDE 286


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +1

Query: 502 LRVMMSFFQY*SFTCFKWY 558
           +++++ FF+  S  CF +Y
Sbjct: 63  IKIVLMFFKEASLYCFNYY 81


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,259
Number of Sequences: 336
Number of extensions: 2582
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)