Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120575.Seq
         (873 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      27   0.25 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      27   0.25 
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    26   0.34 
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    26   0.34 
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    24   1.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.5  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 26.6 bits (56), Expect = 0.25
 Identities = 14/21 (66%), Positives = 15/21 (71%), Gaps = 2/21 (9%)
 Frame = -3

Query: 301 DRKLLQA--IGTVLGQQYPYL 245
           DRKLL A  + TVLG Q PYL
Sbjct: 379 DRKLLSAWYMNTVLGHQNPYL 399


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 26.6 bits (56), Expect = 0.25
 Identities = 14/21 (66%), Positives = 15/21 (71%), Gaps = 2/21 (9%)
 Frame = -3

Query: 301 DRKLLQA--IGTVLGQQYPYL 245
           DRKLL A  + TVLG Q PYL
Sbjct: 271 DRKLLSAWYMNTVLGHQNPYL 291


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 26.2 bits (55), Expect = 0.34
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 104 ILGDSGVGKTSLMNQFVNKKFSN 172
           ILG SG GKT+L+N       SN
Sbjct: 109 ILGSSGAGKTTLLNTLTFHTSSN 131


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 26.2 bits (55), Expect = 0.34
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 104 ILGDSGVGKTSLMNQFVNKKFSN 172
           ILG SG GKT+L+N       SN
Sbjct: 109 ILGSSGAGKTTLLNTLTFHTSSN 131


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +3

Query: 462 CRFCQTWSTMVPEQERIPY 518
           C F   W+ +  +Q+++PY
Sbjct: 300 CEFTGDWTRVFDDQQKVPY 318


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +2

Query: 134 SLMNQFVNKKFSNQYKATIGADFLTKEVIVD 226
           +L+N  + K + N+Y+  I     ++E IVD
Sbjct: 484 ALINSILRKLYKNKYRKLIVDGKKSEEQIVD 514


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,268
Number of Sequences: 336
Number of extensions: 4619
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24099889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)