Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120574.Seq
         (807 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P12827 Cluster: Early 25.9 kDa protein; n=5; Nucleopoly...   147   2e-34
UniRef50_P18569 Cluster: Ecdysteroid UDP-glucosyltransferase pre...   101   3e-20
UniRef50_O92383 Cluster: Orf_7a; n=3; Nucleopolyhedrovirus|Rep: ...    67   4e-10
UniRef50_O10276 Cluster: Putative early 21.8 kDa protein; n=8; N...    36   0.91 
UniRef50_Q06VC5 Cluster: Putative uncharacterized protein; n=1; ...    34   4.8  
UniRef50_Q8IJG4 Cluster: Putative uncharacterized protein; n=1; ...    33   6.4  
UniRef50_UPI0000E4A95E Cluster: PREDICTED: similar to mutant Nie...    33   8.5  

>UniRef50_P12827 Cluster: Early 25.9 kDa protein; n=5;
           Nucleopolyhedrovirus|Rep: Early 25.9 kDa protein -
           Autographa californica nuclear polyhedrosis virus
           (AcMNPV)
          Length = 225

 Score =  147 bits (357), Expect = 2e-34
 Identities = 70/73 (95%), Positives = 70/73 (95%)
 Frame = +2

Query: 290 MNSVHTRLCASSNQFAPFKKRQLAVPVGSVNSLTHTITSTTVASVIPKNYQEKRQKICHI 469
           M SV TRLCASSNQFAPFKKRQLAVPVGSVNSLTHTITSTTV SVIPKNYQEKRQKICHI
Sbjct: 1   MESVQTRLCASSNQFAPFKKRQLAVPVGSVNSLTHTITSTTVTSVIPKNYQEKRQKICHI 60

Query: 470 ISSLRNTHLNFNK 508
           ISSLRNTHLNFNK
Sbjct: 61  ISSLRNTHLNFNK 73



 Score =  121 bits (292), Expect = 2e-26
 Identities = 67/98 (68%), Positives = 69/98 (70%)
 Frame = +1

Query: 493 LEFQ*VQSVXXXXXXXXXXXXXXXXEIIAELVRKLESAQKKTTTTHRNISSKPAAHWKYF 672
           L F  +QSV                EIIAELVRKLESAQKKTT  HRNIS KPA HWKYF
Sbjct: 69  LNFNKIQSVHKKKLRHLQNLLRKKNEIIAELVRKLESAQKKTT--HRNIS-KPA-HWKYF 124

Query: 673 GVVRCDNTIRTIIGNEKFVRRRLAELCTLYTPSTCFAR 786
           GVVRCDNTIRTIIGNEKFVRRRLAELCTLY     F +
Sbjct: 125 GVVRCDNTIRTIIGNEKFVRRRLAELCTLYNAEYVFCQ 162



 Score = 35.5 bits (78), Expect = 1.6
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = +3

Query: 756 IVHAEYVFCQARADGDK 806
           + +AEYVFCQARADGDK
Sbjct: 153 LYNAEYVFCQARADGDK 169


>UniRef50_P18569 Cluster: Ecdysteroid UDP-glucosyltransferase
           precursor; n=14; Nucleopolyhedrovirus|Rep: Ecdysteroid
           UDP-glucosyltransferase precursor - Autographa
           californica nuclear polyhedrosis virus (AcMNPV)
          Length = 506

 Score =  101 bits (241), Expect = 3e-20
 Identities = 45/49 (91%), Positives = 47/49 (95%)
 Frame = +2

Query: 2   KFTERVIRYRHDISRRLYSLKTTAANVPYSNYYMYKSVLSIVMNHIAHF 148
           KFTERVIRYRHDISR+LYSLKTTAANVPYSNYYMYKSV SIVMNH+ HF
Sbjct: 458 KFTERVIRYRHDISRQLYSLKTTAANVPYSNYYMYKSVFSIVMNHLTHF 506


>UniRef50_O92383 Cluster: Orf_7a; n=3; Nucleopolyhedrovirus|Rep:
           Orf_7a - Bombyx mori nuclear polyhedrosis virus (BmNPV)
          Length = 53

 Score = 67.3 bits (157), Expect = 4e-10
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = +2

Query: 164 MLFIIIYLVFLVCATAHFPAFINAHQPEQS 253
           MLFIIIYLVFLVCATAHFPAFINAHQPEQS
Sbjct: 1   MLFIIIYLVFLVCATAHFPAFINAHQPEQS 30



 Score = 56.4 bits (130), Expect = 8e-07
 Identities = 26/44 (59%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
 Frame = +1

Query: 193 FGLCDCA-LPSLYKRSPTRAVILCQDVQRRKHRNEFCSHALMCQ 321
           F +C  A  P+          +LCQDVQRRKHRNEFCSHALMCQ
Sbjct: 10  FLVCATAHFPAFINAHQPEQSLLCQDVQRRKHRNEFCSHALMCQ 53


>UniRef50_O10276 Cluster: Putative early 21.8 kDa protein; n=8;
           Nucleopolyhedrovirus|Rep: Putative early 21.8 kDa
           protein - Orgyia pseudotsugata multicapsid polyhedrosis
           virus (OpMNPV)
          Length = 197

 Score = 36.3 bits (80), Expect = 0.91
 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
 Frame = +1

Query: 586 VRKLESAQKKTTTTHRNISSKPAAH--WKYFGVVRCDNTIRTIIGNEKFVRRRLAELC 753
           VR ++   +K  +   N++++       K+F V    N I T  G+E+FVR+R+ ELC
Sbjct: 67  VRNMQKLIRKKNSVIANLAARLTTQKKTKHFAVTIRKNVIHTTSGSEQFVRQRVLELC 124


>UniRef50_Q06VC5 Cluster: Putative uncharacterized protein; n=1;
           Trichoplusia ni ascovirus 2c|Rep: Putative
           uncharacterized protein - Trichoplusia ni ascovirus 2c
          Length = 501

 Score = 33.9 bits (74), Expect = 4.8
 Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
 Frame = +2

Query: 245 EQSYCARTFKGENIEMNSVHTRLCASSNQFAPFKKRQLAVPVGSVNSLTHT--ITSTTVA 418
           +Q Y A  +K   I   + + +L  +S+    +   +   P+    SL+    IT+TTV 
Sbjct: 215 QQIYFANKYKHNKIFTYNKYHKLETTSSSTPSYYGNRDRYPINKKRSLSSVFNITTTTVK 274

Query: 419 SVIPKNYQEKRQKICHIISSLRNTH 493
               KN     QKIC  I+S   TH
Sbjct: 275 PSYDKNNTFTPQKICFNITSSYKTH 299


>UniRef50_Q8IJG4 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 1104

 Score = 33.5 bits (73), Expect = 6.4
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = +2

Query: 380  NSLTHTITSTTVASVIPKNYQEKRQKICHIISSLRNTHLNFNKYSLY 520
            N +T T T+TT  S    N  + +   CHI  SL +    +N YS Y
Sbjct: 970  NFITTTNTTTTTTSSNNNNNDDDQMNCCHIYHSLTSNDNIYNNYSHY 1016


>UniRef50_UPI0000E4A95E Cluster: PREDICTED: similar to mutant
           Niemann-Pick C1, partial; n=2; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to mutant
           Niemann-Pick C1, partial - Strongylocentrotus purpuratus
          Length = 496

 Score = 33.1 bits (72), Expect = 8.5
 Identities = 19/57 (33%), Positives = 29/57 (50%)
 Frame = +1

Query: 40  QSSIVFIKNNSCQCTVLKLLHV*ICTFYCNESYSTLLVTSINVIHHYLPGFFGLCDC 210
           Q    F++ N+C+C++L+  H+         S   LLVT +  I+H L G  G C C
Sbjct: 395 QGHATFMEANTCECSILQSTHMLYDATAALVSCLELLVTCV-AIYHCLLG-LGCCSC 449


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 795,555,476
Number of Sequences: 1657284
Number of extensions: 15829749
Number of successful extensions: 42472
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 40817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42447
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69554636255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)