Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120573.Seq
(850 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 25 0.88
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.7
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.7
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.7
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.7
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.7
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 23 4.7
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 6.2
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 6.2
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 8.2
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 8.2
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 25.0 bits (52), Expect = 0.88
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 50 QPPRSTTCTTVALRRKRFEFWLA 118
QPP TTCTT+ + R W++
Sbjct: 1083 QPPHDTTCTTLTSQTIRIS-WMS 1104
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.7
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 669 NFLTKKIINVYNKTEMCIRATFDGRYVVTHDI*C 770
N L K I +YN + T+ VVTHD C
Sbjct: 66 NKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSC 99
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.7
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 669 NFLTKKIINVYNKTEMCIRATFDGRYVVTHDI*C 770
N L K I +YN + T+ VVTHD C
Sbjct: 66 NKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSC 99
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.7
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 669 NFLTKKIINVYNKTEMCIRATFDGRYVVTHDI*C 770
N L K I +YN + T+ VVTHD C
Sbjct: 66 NKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSC 99
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.7
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 669 NFLTKKIINVYNKTEMCIRATFDGRYVVTHDI*C 770
N L K I +YN + T+ VVTHD C
Sbjct: 66 NKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSC 99
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.7
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 669 NFLTKKIINVYNKTEMCIRATFDGRYVVTHDI*C 770
N L K I +YN + T+ VVTHD C
Sbjct: 66 NKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSC 99
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = -2
Query: 228 RFVANARKVNYTSVVAPHREHLAAVPI 148
R++A R V+Y +++P R L +
Sbjct: 163 RYLAVTRPVSYPQIMSPRRARLLVATV 189
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 22.2 bits (45), Expect = 6.2
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = -1
Query: 415 GHVLSTFTVSSQSVHKHECP 356
GH + FT + H+ +CP
Sbjct: 294 GHTVRCFTGGPRKSHESQCP 313
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 22.2 bits (45), Expect = 6.2
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 363 SCLCTDCDE 389
SC C DCDE
Sbjct: 325 SCSCLDCDE 333
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 8.2
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +3
Query: 669 NFLTKKIINVYNKTEMCIRATFDGRYVVTHDI*C 770
N L K I +YN + T+ VVTH+ C
Sbjct: 134 NKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSC 167
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 8.2
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +3
Query: 669 NFLTKKIINVYNKTEMCIRATFDGRYVVTHDI*C 770
N L K I +YN + T+ VVTH+ C
Sbjct: 134 NKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSC 167
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,740
Number of Sequences: 438
Number of extensions: 4465
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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