Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120570.Seq
         (781 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.90 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   3.6  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   8.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +1

Query: 385  GNIQLKKMYDRGLLVGRENTSRMEYKPEPEPTDP 486
            G+  L +  +RGL +  +N SR +    PEP  P
Sbjct: 979  GSFPLLRSLNRGLGLIPDNPSREDCTKPPEPVTP 1012


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +3

Query: 525 TPTMDGKVPIYDFDSWSKHHYSDVFAKQKYDKE 623
           T TM+ K  +Y+F ++   H     A   +D E
Sbjct: 297 TATMEEKQELYEFSNFVSQHLPKFSAANFFDIE 329


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 192 FIDNLLPHLNFVPATMMCLE 251
           F +++ P+L FVP  +M L+
Sbjct: 191 FAESIPPYLFFVPPPLMFLQ 210


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 192 FIDNLLPHLNFVPATMMCLE 251
           F +++ P+L FVP  +M L+
Sbjct: 424 FAESIPPYLFFVPPPLMFLQ 443


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 192 FIDNLLPHLNFVPATMMCLE 251
           F +++ P+L FVP  +M L+
Sbjct: 424 FAESIPPYLFFVPPPLMFLQ 443


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,708
Number of Sequences: 336
Number of extensions: 4577
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)