Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120570.Seq
(781 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34242| Best HMM Match : DnaJ (HMM E-Value=9.2e-30) 70 2e-12
SB_11933| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 9e-10
SB_2302| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 4e-08
SB_13439| Best HMM Match : DnaJ (HMM E-Value=5.9e-24) 56 4e-08
SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 7e-08
SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37) 54 1e-07
SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40) 54 1e-07
SB_16146| Best HMM Match : DnaJ (HMM E-Value=2.7e-37) 54 1e-07
SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37) 51 1e-06
SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0) 50 2e-06
SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38) 49 5e-06
SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37) 48 6e-06
SB_2842| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32) 43 2e-04
SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_16477| Best HMM Match : DnaJ (HMM E-Value=8.1e-33) 43 2e-04
SB_31961| Best HMM Match : EGF (HMM E-Value=0) 43 3e-04
SB_3383| Best HMM Match : DnaJ (HMM E-Value=3.8e-40) 43 3e-04
SB_58160| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_45438| Best HMM Match : DnaJ (HMM E-Value=4.4e-26) 42 7e-04
SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_29448| Best HMM Match : DnaJ (HMM E-Value=0.00022) 38 0.009
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.049
SB_56859| Best HMM Match : rve (HMM E-Value=4.8e-35) 33 0.34
SB_41667| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_30672| Best HMM Match : Colipase (HMM E-Value=6.5) 31 1.4
SB_37512| Best HMM Match : DnaJ (HMM E-Value=1.3e-29) 30 1.8
SB_17567| Best HMM Match : DnaJ (HMM E-Value=0.0007) 30 2.4
SB_3343| Best HMM Match : DnaJ (HMM E-Value=0.067) 30 2.4
SB_7623| Best HMM Match : SURF6 (HMM E-Value=2.6) 29 3.2
SB_56284| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_407| Best HMM Match : DnaJ (HMM E-Value=0.0039) 29 5.6
SB_27881| Best HMM Match : Keratin_B2 (HMM E-Value=0.5) 28 7.4
SB_25425| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_31266| Best HMM Match : PKI (HMM E-Value=1) 28 7.4
SB_16586| Best HMM Match : DnaJ (HMM E-Value=4.9e-10) 28 7.4
>SB_34242| Best HMM Match : DnaJ (HMM E-Value=9.2e-30)
Length = 238
Score = 70.1 bits (164), Expect = 2e-12
Identities = 32/59 (54%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Frame = +1
Query: 256 PKATQNDIKTAYYKLSKVHHPDKSK-DEASIKKFRAITEAYEVLGNIQLKKMYDRGLLV 429
PKA+Q+ IK AYYKLS HHPD+ + + + F+ I EAY VLGN++ +K YDRGL+V
Sbjct: 81 PKASQSKIKDAYYKLSMKHHPDRHQGSDKKHEVFQEIAEAYSVLGNLESRKQYDRGLIV 139
Score = 36.7 bits (81), Expect = 0.021
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +3
Query: 552 IYDFDSWSKHHYSDVFAKQKYDKEMVRNSQEKQQ 653
IYDFD W+K HY + +++ DK+ R+ + +Q+
Sbjct: 161 IYDFDEWTKQHYYEALKRRQRDKKERRDEKFEQE 194
>SB_11933| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 238
Score = 70.1 bits (164), Expect = 2e-12
Identities = 32/59 (54%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Frame = +1
Query: 256 PKATQNDIKTAYYKLSKVHHPDKSK-DEASIKKFRAITEAYEVLGNIQLKKMYDRGLLV 429
PKA+Q+ IK AYYKLS HHPD+ + + + F+ I EAY VLGN++ +K YDRGL+V
Sbjct: 81 PKASQSKIKDAYYKLSMKHHPDRHQGSDKKHEVFQEIAEAYSVLGNLESRKQYDRGLIV 139
Score = 35.1 bits (77), Expect = 0.064
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +3
Query: 552 IYDFDSWSKHHYSDVFAKQKYDKEMVRNSQEKQQKI 659
IYDFD W+K HY + +++ DK+ R+ + ++ I
Sbjct: 161 IYDFDEWTKQHYYEALKRRQRDKKERRDEKFDKRHI 196
>SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1084
Score = 61.3 bits (142), Expect = 9e-10
Identities = 25/53 (47%), Positives = 40/53 (75%)
Frame = +1
Query: 256 PKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGNIQLKKMYD 414
P A Q +IK AY++L+K +HPD +KD+++ +KF+ ++EAYEVL + +K YD
Sbjct: 68 PNANQKEIKKAYFELAKKYHPDTNKDKSASEKFQEVSEAYEVLSDDGKRKAYD 120
>SB_2302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 445
Score = 55.6 bits (128), Expect = 4e-08
Identities = 21/54 (38%), Positives = 37/54 (68%)
Frame = +1
Query: 256 PKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGNIQLKKMYDR 417
P ATQ +IK+AYY+LS+++HPD + + ++F +T AY L ++ ++ YD+
Sbjct: 60 PTATQREIKSAYYELSRIYHPDLNSSAEARERFAELTLAYNTLSRLETRREYDK 113
>SB_13439| Best HMM Match : DnaJ (HMM E-Value=5.9e-24)
Length = 565
Score = 55.6 bits (128), Expect = 4e-08
Identities = 21/54 (38%), Positives = 37/54 (68%)
Frame = +1
Query: 256 PKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGNIQLKKMYDR 417
P ATQ +IK+AYY+LS+++HPD + + ++F +T AY L ++ ++ YD+
Sbjct: 207 PTATQREIKSAYYELSRIYHPDLNSSAEARERFAELTLAYNTLSRLETRREYDK 260
>SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 966
Score = 54.8 bits (126), Expect = 7e-08
Identities = 25/55 (45%), Positives = 38/55 (69%)
Frame = +1
Query: 256 PKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGNIQLKKMYDRG 420
P AT +IK +Y KL+ +HPDK+ DE +F+ I++AYEVL + + +K+YD G
Sbjct: 74 PTATATEIKKSYRKLALKYHPDKNPDEGD--RFKQISQAYEVLSDEKKRKIYDEG 126
>SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37)
Length = 386
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = +1
Query: 262 ATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGNIQLKKMYDR 417
A+ NDIK AY KL+K HPDK+ D +KF+ IT AYE+L + + +++YDR
Sbjct: 16 ASDNDIKKAYRKLAKELHPDKNPDTG--EKFKDITFAYEILSDPEKRELYDR 65
>SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40)
Length = 351
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/52 (46%), Positives = 38/52 (73%)
Frame = +1
Query: 262 ATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGNIQLKKMYDR 417
A+ +DIK AY K + +HPDK+K + +KF+ I+EAYEVL + + K++YD+
Sbjct: 15 ASADDIKKAYRKQALKYHPDKNKSPGAEEKFKEISEAYEVLSDPKKKEIYDQ 66
>SB_16146| Best HMM Match : DnaJ (HMM E-Value=2.7e-37)
Length = 79
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = +1
Query: 262 ATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGNIQLKKMYDR 417
A+ NDIK AY KL+K HPDK+ D +KF+ IT AYE+L + + +++YDR
Sbjct: 16 ASDNDIKKAYRKLAKELHPDKNPDTG--EKFKDITFAYEILSDPEKRELYDR 65
>SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 52.0 bits (119), Expect = 5e-07
Identities = 22/52 (42%), Positives = 37/52 (71%)
Frame = +1
Query: 262 ATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGNIQLKKMYDR 417
A+ ++K AY K + +HPDK+KD + +KF+ I EAYEVL + Q ++++D+
Sbjct: 15 ASDQELKKAYKKQAFKYHPDKNKDPGAEEKFKEIAEAYEVLSDPQKREIFDQ 66
>SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37)
Length = 238
Score = 50.8 bits (116), Expect = 1e-06
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +1
Query: 262 ATQNDIKTAYYKLSKVHHPDKSKDEASI-KKFRAITEAYEVLGNIQLKKMYDRGLLVGRE 438
A++N IK AY KL+ HPDK+KD+ +KF I AYEVL + +K+YD+ G +
Sbjct: 36 ASKNQIKRAYRKLAMKLHPDKNKDDPKAQEKFHDIGAAYEVLADDDQRKIYDQRGEEGLK 95
Query: 439 NTSRMEY 459
N ++
Sbjct: 96 NAGHRDH 102
>SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 576
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/52 (40%), Positives = 35/52 (67%)
Frame = +1
Query: 262 ATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGNIQLKKMYDR 417
A+ IK A+ K++ +HPDK+K + + +KFR + EAYEVL + ++ YD+
Sbjct: 37 ASDKQIKKAFRKMAVKYHPDKNKGKDAEEKFREVAEAYEVLSDENKRRQYDQ 88
>SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38)
Length = 161
Score = 48.8 bits (111), Expect = 5e-06
Identities = 23/62 (37%), Positives = 41/62 (66%)
Frame = +1
Query: 262 ATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGNIQLKKMYDRGLLVGREN 441
A+ +DIK AY + + + HPDK+K+ + +KF+ I+EAY+VL + + + ++D G +
Sbjct: 15 ASDDDIKKAYRRQALIFHPDKNKNSGAEEKFKEISEAYKVLTDPRQRDIFDMYGEEGLKG 74
Query: 442 TS 447
TS
Sbjct: 75 TS 76
>SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37)
Length = 399
Score = 48.4 bits (110), Expect = 6e-06
Identities = 22/52 (42%), Positives = 35/52 (67%)
Frame = +1
Query: 262 ATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGNIQLKKMYDR 417
AT DIK Y KLS +HPDK+++ ++ KFR EAY+VL + + + +Y++
Sbjct: 15 ATDADIKKEYRKLSLKYHPDKNQEPSAEVKFRQAAEAYDVLSDPKKRAIYNQ 66
>SB_2842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 45.2 bits (102), Expect = 6e-05
Identities = 37/146 (25%), Positives = 72/146 (49%), Gaps = 5/146 (3%)
Frame = +1
Query: 262 ATQNDIKTAYYKLSKVHHPD---KSKDEASIKKFRAITEAYEVLGNIQLKKMYDRGLLVG 432
A++++IK AY K+S HPD K + E + +KF+A++++Y +L + + + +YD +
Sbjct: 26 ASESEIKRAYRKISLQVHPDRADKGEKEKATRKFQALSKSYCILSDKEKRAIYDESGEID 85
Query: 433 RENTSRMEYKPEPEPTDPTLKFYKSLQLAISHPPWTGKFQFMTLIVG--PNTIIQMYLQS 606
EN E + I +TG +T ++G PN ++ L+
Sbjct: 86 EENID------EDRDWTQYWRLLSKRLFIIGKSVFTGGKVLITYVIGQDPNRKKKVTLED 139
Query: 607 RNMIRKWYETHKKNNRKY*NLLSKKE 684
IRK+ ++K ++ + +L+S E
Sbjct: 140 ---IRKFEASYKGSDEELSDLMSAYE 162
>SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 875
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Frame = +1
Query: 262 ATQNDIKTAYYKLSKVHHPDKSKD--EASIKKFRAITEAYEVLGNIQLKK 405
ATQ +IK Y KL+ HPD+ +D E + K F I EAYE+L ++ K+
Sbjct: 805 ATQEEIKKRYKKLAMKWHPDRHRDNKEEAQKHFMEIQEAYEILSKLKTKR 854
>SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 6/59 (10%)
Frame = +1
Query: 262 ATQNDIKTAYYKLSKVHHPDK----SKDEASI--KKFRAITEAYEVLGNIQLKKMYDRG 420
A++++IK AY K + HHPD+ S ++ I K+F+ + EAY +L + + K+ YD G
Sbjct: 170 ASEDEIKKAYKKEALKHHPDRHSGASDEQKKIAEKQFKEVNEAYSILSDPKKKRRYDSG 228
>SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32)
Length = 264
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 6/59 (10%)
Frame = +1
Query: 262 ATQNDIKTAYYKLSKVHHPDK----SKDEASI--KKFRAITEAYEVLGNIQLKKMYDRG 420
A++++IK AY K + HHPD+ S ++ I K+F+ + EAY +L + + K+ YD G
Sbjct: 170 ASEDEIKKAYKKEALKHHPDRHSGASDEQKKIAEKQFKEVNEAYSILSDPKKKRRYDSG 228
>SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/52 (38%), Positives = 36/52 (69%)
Frame = +1
Query: 262 ATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGNIQLKKMYDR 417
AT +DI+ AY +L+ +HPD K+ + + F+ ++EAYEVL + Q ++ +D+
Sbjct: 15 ATTDDIRRAYRRLALKYHPD--KNAGTEENFKEVSEAYEVLCDPQQRERFDK 64
>SB_16477| Best HMM Match : DnaJ (HMM E-Value=8.1e-33)
Length = 138
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 3/46 (6%)
Frame = +1
Query: 262 ATQNDIKTAYYKLSKVHHPDK---SKDEASIKKFRAITEAYEVLGN 390
A++ DIK +Y KL+ HPDK +K+EA +KF+ I+EAYEVL +
Sbjct: 14 ASEQDIKKSYRKLALKWHPDKNPQNKEEAE-RKFKEISEAYEVLSD 58
>SB_31961| Best HMM Match : EGF (HMM E-Value=0)
Length = 2813
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +1
Query: 262 ATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGNIQLKKMYD 414
ATQ +I+ AY ++S HPD++K++ + KFR + EVL + +K YD
Sbjct: 2494 ATQAEIRRAYRRISLQLHPDRNKEDDAELKFRKLVAVAEVLKDEDKRKRYD 2544
>SB_3383| Best HMM Match : DnaJ (HMM E-Value=3.8e-40)
Length = 250
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/54 (37%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 262 ATQNDIKTAYYKLSKVHHPDKSKD--EASIKKFRAITEAYEVLGNIQLKKMYDR 417
A++ D+K AY + + HPDK+ E + +KF+ ++EAYEVL + + + +YD+
Sbjct: 15 ASEEDVKKAYRRQALRWHPDKNPTNREHAEEKFKKLSEAYEVLSDKEKRDIYDK 68
>SB_58160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 41.5 bits (93), Expect = 7e-04
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Frame = +1
Query: 256 PK-ATQNDIKTAYYKLSKVHHPDKSKDEA-SIKKFRAITEAYEVLGNIQLKKMYDRGL 423
PK A+Q +IK+A+ K +K HPD + D+ S K F ++EAY L + ++ YD L
Sbjct: 16 PKDASQTEIKSAFIKKTKEFHPDVNPDDPDSHKAFIKVSEAYTTLSSSARRQQYDARL 73
>SB_45438| Best HMM Match : DnaJ (HMM E-Value=4.4e-26)
Length = 211
Score = 41.5 bits (93), Expect = 7e-04
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Frame = +1
Query: 256 PK-ATQNDIKTAYYKLSKVHHPDKSKDEA-SIKKFRAITEAYEVLGNIQLKKMYDRGL 423
PK A+Q +IK+A+ K +K HPD + D+ S K F ++EAY L + ++ YD L
Sbjct: 77 PKDASQTEIKSAFIKKTKEFHPDVNPDDPDSHKAFIKVSEAYTTLSSSARRQQYDARL 134
>SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 572
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +1
Query: 277 IKTAYYKLSKVHHPDKSKDEA--SIKKFRAITEAYEVLGNIQLKKMYDR 417
+K Y KL+ HPDK+ D A S + FR I +AY+VL + Q + YD+
Sbjct: 20 LKKTYRKLALKWHPDKNLDNAEESTRVFREIQQAYDVLSDPQERAFYDK 68
>SB_29448| Best HMM Match : DnaJ (HMM E-Value=0.00022)
Length = 118
Score = 37.9 bits (84), Expect = 0.009
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +1
Query: 256 PKATQNDIKTAYYKLSKVHHPDKSKDEASIKKF 354
P AT +IK+AYY+LS+++HPD + + ++F
Sbjct: 84 PTATLREIKSAYYELSRIYHPDLNSSAEARERF 116
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 35.5 bits (78), Expect = 0.049
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +1
Query: 253 QPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAIT 366
Q AT++DI AY KL+ + HPDKS S + F+A++
Sbjct: 151 QQGATKDDINRAYKKLAVLIHPDKSVAPGSEEAFKALS 188
>SB_56859| Best HMM Match : rve (HMM E-Value=4.8e-35)
Length = 1671
Score = 32.7 bits (71), Expect = 0.34
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 262 ATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAYEVLGN 390
A+ +I+ Y LSK +HPDK + +KF I +AYE + +
Sbjct: 1259 ASVAEIRRQYRSLSKKYHPDKETGDP--RKFMRIAKAYEAVSD 1299
>SB_41667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 555 YDFDSWSKHHYSDVFAKQKYDKEMVRNSQEKQQKILESTKQE 680
YDFDSW + Y D K+K + R EK+ + + +++
Sbjct: 191 YDFDSWREFSYLDEEEKEKGENRDERRWIEKENRAMRQKRKK 232
>SB_30672| Best HMM Match : Colipase (HMM E-Value=6.5)
Length = 305
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = -1
Query: 166 LTEHLQINSCMF-QKFLHGNQIYFLY 92
L E L+ NSC+ KFLH ++Y+LY
Sbjct: 159 LVEPLKANSCLMPSKFLHTRKLYYLY 184
>SB_37512| Best HMM Match : DnaJ (HMM E-Value=1.3e-29)
Length = 291
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 262 ATQNDIKTAYYKLSKVHHPDKSKDEASIKK-FRAITEAYEVLGNIQLKKMYDRGLLVGRE 438
+T+ +I AY K + HPDK+ D + F +++A EVL + + + ++ L
Sbjct: 18 STEKEILKAYRKKALKCHPDKNPDNPKASELFHKLSKALEVLTDPKARAAFNNLLNAKER 77
Query: 439 NTSR 450
N R
Sbjct: 78 NKLR 81
>SB_17567| Best HMM Match : DnaJ (HMM E-Value=0.0007)
Length = 831
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 256 PKATQNDIKTAYYKLSKVHHPDK 324
P+A+ +DIK Y KL+ + HPDK
Sbjct: 809 PEASDDDIKRQYRKLAVLIHPDK 831
>SB_3343| Best HMM Match : DnaJ (HMM E-Value=0.067)
Length = 29
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 256 PKATQNDIKTAYYKLSKVHHPDK 324
P+A+ +DIK Y KL+ + HPDK
Sbjct: 7 PEASDDDIKRQYRKLAVLIHPDK 29
>SB_7623| Best HMM Match : SURF6 (HMM E-Value=2.6)
Length = 256
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +3
Query: 564 DSWSKHHYSDVFAKQKYDKEMVRNSQEKQQKILESTKQE 680
+ W K + A+ + K+M++N +E++ +IL T+QE
Sbjct: 186 EQWRKEGVARREAELEAKKQMMKNMEEEELRILRKTRQE 224
>SB_56284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -1
Query: 124 FLHGNQIYFLYINTCRV*CFCIEVLSY 44
++ GN+IY L +N C V F I ++SY
Sbjct: 165 YILGNKIYTLIVNVCIVVLFGITIVSY 191
>SB_407| Best HMM Match : DnaJ (HMM E-Value=0.0039)
Length = 106
Score = 28.7 bits (61), Expect = 5.6
Identities = 9/22 (40%), Positives = 18/22 (81%)
Frame = +1
Query: 268 QNDIKTAYYKLSKVHHPDKSKD 333
++ I+ AY++L++ +HPDK+ D
Sbjct: 83 ESKIRKAYFRLAQKYHPDKNPD 104
>SB_27881| Best HMM Match : Keratin_B2 (HMM E-Value=0.5)
Length = 168
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 199 TIYYLTSILCQPL*CAWSQPKATQNDIKTAYYKLSKVHHP 318
TI Y +S + P+ QP + + T Y+ S+++HP
Sbjct: 27 TILYQSSCINHPVSTILYQPSCISHPVSTIRYQPSRINHP 66
>SB_25425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +3
Query: 543 KVPIYDFDSWSKHHYSDVFAKQKYDKEMVRNSQEKQQKI 659
K+P+Y+F + KH D+ + +E + N +E +++
Sbjct: 13 KIPLYNFQPFLKHSTDDILVTGRDSEEHLTNLEEVLRRL 51
>SB_31266| Best HMM Match : PKI (HMM E-Value=1)
Length = 1507
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +2
Query: 464 QNQNLQILP*SFTSPCN--SQYHTHHGRESSNL 556
+N+ QI P S T+P + SQ HTH SSNL
Sbjct: 259 ENRRTQIEPASSTTPTSQASQQHTHAQYSSSNL 291
>SB_16586| Best HMM Match : DnaJ (HMM E-Value=4.9e-10)
Length = 141
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 8/52 (15%)
Frame = +1
Query: 253 QPKATQNDIKTAYYKLSKVHHPDK--------SKDEASIKKFRAITEAYEVL 384
+P IK AY KL HHPDK E + +K + I +AYE++
Sbjct: 83 KPTDDATTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELI 134
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,214,001
Number of Sequences: 59808
Number of extensions: 496935
Number of successful extensions: 1231
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1217
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2131907602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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