Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120570.Seq
         (781 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146738-1|AAO12098.1|  134|Anopheles gambiae odorant-binding pr...    25   2.6  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    24   6.1  

>AY146738-1|AAO12098.1|  134|Anopheles gambiae odorant-binding
           protein AgamOBP28 protein.
          Length = 134

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 631 ETHKKNNRKY*NLLSKKELFGLL*S*VDCLLRCYLMDSMIMD 756
           E HK  N+++  LL   + F  + +   C LRC+L  +  MD
Sbjct: 36  EQHKGLNKEHLVLLRDGD-FSKVDADTKCFLRCFLQQANFMD 76


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
 Frame = +1

Query: 247 WSQPKATQNDIKTAYYKLSKVHHPDKSKDEASIKKFRAITEAY--EVLGNI 393
           W    A +ND    Y     VHHP  +   +  ++F   T  Y  EVL  I
Sbjct: 72  WRGATANRNDSSVHYQPPPTVHHPADAVTLSPAQEFDQQTFVYYAEVLSVI 122


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 837,581
Number of Sequences: 2352
Number of extensions: 16056
Number of successful extensions: 34
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)