Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120569.Seq
(804 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71; Eukaryo... 149 8e-35
UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellul... 141 2e-32
UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep: ... 137 3e-31
UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3; Euka... 115 1e-24
UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma j... 107 3e-22
UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeb... 99 6e-20
UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3; Archaea... 96 1e-18
UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10; Archae... 93 6e-18
UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6; Thermop... 92 1e-17
UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1; ... 91 2e-17
UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1; Encephal... 87 5e-16
UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17; Euryar... 85 2e-15
UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella... 82 2e-14
UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12; Archae... 81 2e-14
UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4; Thermop... 79 2e-13
UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus N... 77 4e-13
UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1; Nanoarc... 74 5e-12
UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2; Crenarchaeot... 73 8e-12
UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8 ... 69 2e-10
UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|R... 64 4e-09
UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;... 58 2e-07
UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep... 57 5e-07
UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90; Bacteri... 56 8e-07
UniRef50_A3LNH9 Cluster: Predicted protein; n=5; Saccharomycetac... 54 3e-06
UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2; n... 54 3e-06
UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular org... 54 6e-06
UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular... 54 6e-06
UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellul... 53 1e-05
UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellul... 52 2e-05
UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;... 51 3e-05
UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome. prec... 51 4e-05
UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and org... 50 5e-05
UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus ... 50 9e-05
UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis ... 49 2e-04
UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2; Streptophyti... 47 5e-04
UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondri... 47 6e-04
UniRef50_O23283 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria gr... 46 0.001
UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17; Bacteri... 46 0.001
UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus C... 45 0.002
UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep... 45 0.002
UniRef50_Q8LWZ7 Cluster: Ribosomal protein L2; n=3; Phaeophyceae... 44 0.005
UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1; Thraustochyt... 44 0.006
UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10; Magnoli... 44 0.006
UniRef50_Q9TAJ4 Cluster: Ribosomal protein L2; n=1; Cafeteria ro... 43 0.010
UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6; Eurotiom... 43 0.010
UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;... 43 0.010
UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondri... 42 0.014
UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellul... 42 0.014
UniRef50_A7NTF6 Cluster: Chromosome chr18 scaffold_1, whole geno... 42 0.024
UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5; Tracheophyta... 40 0.055
UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3; Dictyostelii... 40 0.073
UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas d... 40 0.097
UniRef50_A7AXH0 Cluster: Rpl2; n=1; Babesia bovis|Rep: Rpl2 - Ba... 40 0.097
UniRef50_Q9MG94 Cluster: Ribosomal protein L2; n=2; Chrysodidymu... 39 0.17
UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria tene... 39 0.17
UniRef50_Q4UCG9 Cluster: 50S ribosomal protein L2, putative; n=8... 39 0.17
UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1; ... 39 0.17
UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae ... 38 0.22
UniRef50_A4Q378 Cluster: Translation protein SH3-like; n=1; Medi... 38 0.22
UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma j... 38 0.30
UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2; Fi... 38 0.30
UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-P... 38 0.39
UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma g... 37 0.52
UniRef50_Q951B6 Cluster: Ribosomal protein L2; n=5; Tetrahymena|... 37 0.52
UniRef50_Q4P5V2 Cluster: Putative uncharacterized protein; n=1; ... 36 0.90
UniRef50_P15765 Cluster: Mitochondrial 60S ribosomal protein L2;... 36 0.90
UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2; ... 36 1.2
UniRef50_Q5DUX7 Cluster: Hydrogenosomal 60S ribosomal protein L2... 36 1.2
UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288, w... 36 1.6
UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1; ... 36 1.6
UniRef50_A1ZS28 Cluster: Transcriptional regulator; n=1; Microsc... 35 2.1
UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE454... 35 2.1
UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2, mitoch... 35 2.8
UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome s... 34 3.6
UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole gen... 34 3.6
UniRef50_Q4MYC0 Cluster: Ribosomal protein L2, putative; n=1; Th... 34 3.6
UniRef50_Q25807 Cluster: Rpl2 protein; n=2; Plasmodium|Rep: Rpl2... 34 3.6
UniRef50_Q1IVY0 Cluster: Putative uncharacterized protein; n=1; ... 34 4.8
UniRef50_A0YL57 Cluster: Putative uncharacterized protein; n=1; ... 34 4.8
UniRef50_Q559N5 Cluster: NAD+ kinase family protein; n=2; Dictyo... 34 4.8
UniRef50_O60035 Cluster: Protein PDC2; n=4; Candida albicans|Rep... 33 6.4
UniRef50_UPI00006C0AC8 Cluster: PREDICTED: similar to mas-relate... 33 8.4
UniRef50_A6NSE2 Cluster: Putative uncharacterized protein; n=1; ... 33 8.4
UniRef50_Q0CD71 Cluster: Predicted protein; n=3; Trichocomaceae|... 33 8.4
UniRef50_A6R0K7 Cluster: Predicted protein; n=2; Pezizomycotina|... 33 8.4
UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial... 33 8.4
>UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71;
Eukaryota|Rep: 60S ribosomal protein L8 - Drosophila
melanogaster (Fruit fly)
Length = 256
Score = 149 bits (361), Expect = 8e-35
Identities = 68/99 (68%), Positives = 82/99 (82%), Gaps = 1/99 (1%)
Frame = +3
Query: 216 LLPKXLHR-PICLLGKKATLEVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATV 392
+ P+ +H G+KATL++GNVMP+ MP+GTI+CNLEEK GDRGRLAR SGN+ATV
Sbjct: 77 IAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATV 136
Query: 393 IGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRM 509
I HN D K+TRVKLPSGAKKV+PS+NR MVGIVAGGGR+
Sbjct: 137 IAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRI 175
Score = 141 bits (341), Expect = 2e-32
Identities = 64/75 (85%), Positives = 70/75 (93%)
Frame = +2
Query: 2 RAQRRGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRD 181
RAQR+GAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAVVHFRD
Sbjct: 6 RAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFRD 65
Query: 182 PYKFKTRKELFIAPE 226
PY++K RKELFIAPE
Sbjct: 66 PYRYKIRKELFIAPE 80
Score = 140 bits (338), Expect = 5e-32
Identities = 63/65 (96%), Positives = 63/65 (96%)
Frame = +2
Query: 509 DKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 688
DKPILKAGRAYHKYKVKRN WP VRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV
Sbjct: 176 DKPILKAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 235
Query: 689 GLIAA 703
GLIAA
Sbjct: 236 GLIAA 240
>UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellular
organisms|Rep: 60S ribosomal protein L8 - Homo sapiens
(Human)
Length = 257
Score = 141 bits (342), Expect = 2e-32
Identities = 63/85 (74%), Positives = 76/85 (89%)
Frame = +3
Query: 255 GKKATLEVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKL 434
GKKA L +GNV+PVG MP+GTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKL
Sbjct: 91 GKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKL 150
Query: 435 PSGAKKVLPSSNRGMVGIVAGGGRM 509
PSG+KKV+ S+NR +VG+VAGGGR+
Sbjct: 151 PSGSKKVISSANRAVVGVVAGGGRI 175
Score = 128 bits (309), Expect = 2e-28
Identities = 56/65 (86%), Positives = 58/65 (89%)
Frame = +2
Query: 509 DKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 688
DKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKV
Sbjct: 176 DKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKV 235
Query: 689 GLIAA 703
GLIAA
Sbjct: 236 GLIAA 240
Score = 127 bits (306), Expect = 4e-28
Identities = 60/89 (67%), Positives = 72/89 (80%), Gaps = 1/89 (1%)
Frame = +2
Query: 2 RAQRRGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRD 181
R QR+GAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRD
Sbjct: 6 RGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRD 65
Query: 182 PYKFKTRKELFIAPE-XSTQANLFIGKES 265
PY+FK R ELFIA E T ++ GK++
Sbjct: 66 PYRFKKRTELFIAAEGIHTGQFVYCGKKA 94
>UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep:
Ribosomal protein - Codakia orbicularis
Length = 234
Score = 137 bits (331), Expect = 3e-31
Identities = 60/65 (92%), Positives = 62/65 (95%)
Frame = +2
Query: 509 DKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 688
DKP+LKAGRAYHKYK KRNCWP VRGVAMNPVEHPHGGGNHQHIGKASTV+R TSAGRKV
Sbjct: 152 DKPMLKAGRAYHKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVRRDTSAGRKV 211
Query: 689 GLIAA 703
GLIAA
Sbjct: 212 GLIAA 216
Score = 125 bits (302), Expect = 1e-27
Identities = 58/90 (64%), Positives = 71/90 (78%), Gaps = 1/90 (1%)
Frame = +2
Query: 2 RAQRRGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRD 181
R+QR+G GSVF +HTK RKG LR++D+AERHGY+KGVVKDI+HDPGRGAPLA V FRD
Sbjct: 6 RSQRKGPGSVFKAHTKHRKGKAALRAVDFAERHGYVKGVVKDIVHDPGRGAPLAKVTFRD 65
Query: 182 PYKFKTRKELFIAPEXS-TQANLFIGKESN 268
PYK+K R E FIA E T ++ GK++N
Sbjct: 66 PYKYKMRTETFIATEGMYTGQFIYCGKKAN 95
Score = 96.7 bits (230), Expect = 6e-19
Identities = 43/64 (67%), Positives = 54/64 (84%)
Frame = +3
Query: 318 IVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAG 497
I C + + RG+LARASGN+ATVI HNPD K++RVKLPSG+KKV+PS+NR +VGIVAG
Sbjct: 88 IYCGKKANLQIRGKLARASGNYATVISHNPDTKKSRVKLPSGSKKVIPSANRAIVGIVAG 147
Query: 498 GGRM 509
GGR+
Sbjct: 148 GGRI 151
>UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3;
Eukaryota|Rep: 60S ribosomal protein KD4/L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 123
Score = 115 bits (277), Expect = 1e-24
Identities = 55/89 (61%), Positives = 69/89 (77%), Gaps = 1/89 (1%)
Frame = +2
Query: 2 RAQRRGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRD 181
RAQR+ AGSVF SHT RKG K RSLD+ ER+GY+KGVV +IIHDPGRGAPLA V FR
Sbjct: 6 RAQRKVAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVTFRH 65
Query: 182 PYKFKTRKELFIAPEXSTQ-ANLFIGKES 265
P++FK +KELF+ E T ++L+ GK++
Sbjct: 66 PFRFKKQKELFVXXEVCTPVSSLYCGKKA 94
Score = 34.7 bits (76), Expect = 2.8
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 255 GKKATLEVGNVMPVGAMPKGTIVCNLEEKMGDR 353
GKKATL VGNV+P+ ++P+G + +G R
Sbjct: 91 GKKATLVVGNVLPLRSIPEGAXCLQRRDHVGYR 123
>UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07017 protein - Schistosoma
japonicum (Blood fluke)
Length = 112
Score = 107 bits (257), Expect = 3e-22
Identities = 48/68 (70%), Positives = 57/68 (83%)
Frame = +2
Query: 2 RAQRRGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRD 181
R+QR+GAG VF +HTK RKGA +LR +D+AERHGYI+GVVK+IIHDPGRGAPLA V FRD
Sbjct: 2 RSQRKGAGGVFKAHTKHRKGAARLRPVDFAERHGYIRGVVKEIIHDPGRGAPLAKVAFRD 61
Query: 182 PYKFKTRK 205
Y +K K
Sbjct: 62 VYSYKLIK 69
>UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L8 - Entamoeba
histolytica
Length = 158
Score = 99 bits (238), Expect = 6e-20
Identities = 42/65 (64%), Positives = 54/65 (83%)
Frame = +3
Query: 255 GKKATLEVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKL 434
G KA+L +GNV+P+G P+GT+VCN+E K GDRG +ARASGN+ATVI HN D + TR++L
Sbjct: 82 GSKASLHIGNVLPIGQCPEGTVVCNVESKPGDRGIIARASGNYATVISHNADNETTRIRL 141
Query: 435 PSGAK 449
PSGAK
Sbjct: 142 PSGAK 146
Score = 51.6 bits (118), Expect = 2e-05
Identities = 24/39 (61%), Positives = 29/39 (74%)
Frame = +2
Query: 110 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPE 226
+G+VK I HDPGRGAPLA V FR+P ++ KELFI E
Sbjct: 33 RGLVKSIEHDPGRGAPLARVVFRNPRQYGLDKELFICAE 71
>UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3;
Archaea|Rep: 50S ribosomal protein L2P - Aeropyrum
pernix
Length = 238
Score = 95.9 bits (228), Expect = 1e-18
Identities = 44/65 (67%), Positives = 49/65 (75%)
Frame = +2
Query: 509 DKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 688
+KPI+KAG AYHK+KVK WP VRGVAMN V+HP GGG HQH G+ STV R GRKV
Sbjct: 166 EKPIMKAGFAYHKWKVKARKWPRVRGVAMNAVDHPFGGGRHQHKGRPSTVARTAPPGRKV 225
Query: 689 GLIAA 703
G IAA
Sbjct: 226 GHIAA 230
Score = 79.0 bits (186), Expect = 1e-13
Identities = 37/86 (43%), Positives = 58/86 (67%)
Frame = +3
Query: 252 LGKKATLEVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVK 431
+G A E GN++P+G +P+GT V N+E + GD G+LAR +G++A V+G +T ++
Sbjct: 82 IGPAAKPEAGNILPLGKIPEGTEVFNVELRPGDGGKLARQAGSYALVVGR--AGAKTILR 139
Query: 432 LPSGAKKVLPSSNRGMVGIVAGGGRM 509
LPSG K +P+ +R +GI AG GR+
Sbjct: 140 LPSGKDKEVPNDSRATIGIPAGAGRI 165
>UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10;
Archaea|Rep: 50S ribosomal protein L2P - Sulfolobus
tokodaii
Length = 238
Score = 93.5 bits (222), Expect = 6e-18
Identities = 42/65 (64%), Positives = 47/65 (72%)
Frame = +2
Query: 509 DKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 688
+KP+LKAG Y KYKVK WP+VRGVAMN V HPHGGG HQ + + STV R GRKV
Sbjct: 165 EKPLLKAGNNYWKYKVKAKKWPHVRGVAMNAVSHPHGGGLHQSVSRPSTVSRNAPPGRKV 224
Query: 689 GLIAA 703
G IAA
Sbjct: 225 GHIAA 229
Score = 73.7 bits (173), Expect = 5e-12
Identities = 35/84 (41%), Positives = 54/84 (64%)
Frame = +3
Query: 252 LGKKATLEVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVK 431
+GK A + GN++ VG +P+GTI+ N+E+ GD G+ AR++G + V+G D + VK
Sbjct: 81 IGKNAAISNGNIVEVGNVPEGTIISNIEKTRGDGGKFARSAGTYGVVVGKTGD--KVLVK 138
Query: 432 LPSGAKKVLPSSNRGMVGIVAGGG 503
L S + S+ R +VG+VAGGG
Sbjct: 139 LSSEKIAQVSSNARAIVGVVAGGG 162
Score = 38.3 bits (85), Expect = 0.22
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 8 QRRGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 184
QR G G + F S + +R G K+ +++ G G V DI+H+PG APLA++ D
Sbjct: 8 QRAGRGGINFRSPSWRRVGKAKIPNIE-----GEHIGKVIDIVHNPGTNAPLALIKLDDG 62
Query: 185 YKF 193
KF
Sbjct: 63 TKF 65
>UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6;
Thermoproteales|Rep: 50S ribosomal protein L2P -
Pyrobaculum aerophilum
Length = 246
Score = 92.3 bits (219), Expect = 1e-17
Identities = 42/92 (45%), Positives = 62/92 (67%)
Frame = +3
Query: 252 LGKKATLEVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVK 431
+GK A+ + GN+M +G +P+GT++ N+E++ GD G+ ARA G +A VIG P+ +T ++
Sbjct: 82 IGKGASPKTGNIMILGEIPEGTMIFNVEKRAGDGGKFARAGGTYAVVIGQKPEENKTIIR 141
Query: 432 LPSGAKKVLPSSNRGMVGIVAGGGRMTNLF*K 527
LPSG + S R VGIVAGGGR+ F K
Sbjct: 142 LPSGRTVEVDSRGRATVGIVAGGGRIEKPFLK 173
Score = 66.1 bits (154), Expect = 1e-09
Identities = 31/65 (47%), Positives = 42/65 (64%)
Frame = +2
Query: 509 DKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 688
+KP LKAG+ YH+ + K +P VRG AM+P HPHGGG+HQ G + V + G+KV
Sbjct: 168 EKPFLKAGKKYHRARAKAWKYPTVRGKAMSPYAHPHGGGSHQKGG--TPVPKTAPPGQKV 225
Query: 689 GLIAA 703
G I +
Sbjct: 226 GFIGS 230
Score = 35.1 bits (77), Expect = 2.1
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 8 QRRG-AGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVV 169
QRRG GS F S + KR G + L GY V DI+H+PG AP+A +
Sbjct: 8 QRRGRGGSQFRSPSWKRDGPVRYPPLGVISGKGY----VVDILHEPGLNAPVAKI 58
>UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L2P - Ignicoccus hospitalis KIN4/I
Length = 251
Score = 91.5 bits (217), Expect = 2e-17
Identities = 41/65 (63%), Positives = 47/65 (72%)
Frame = +2
Query: 509 DKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 688
+KP+LKAG AY+K+K K WP VRGVAMN V HPHGGGNHQ G +TV R G+KV
Sbjct: 170 EKPLLKAGNAYYKWKAKAKKWPVVRGVAMNAVNHPHGGGNHQSPGYPTTVARNAPPGQKV 229
Query: 689 GLIAA 703
G IAA
Sbjct: 230 GHIAA 234
Score = 65.7 bits (153), Expect = 1e-09
Identities = 32/85 (37%), Positives = 54/85 (63%)
Frame = +3
Query: 252 LGKKATLEVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVK 431
+G A GN++P+ A+P+GT + N+E + GD G+LAR+ G +A ++G + ++ ++
Sbjct: 86 IGPNAAPVNGNILPLYAIPEGTQIFNVEIRPGDGGKLARSGGAYAILVGKSGNS--AIIQ 143
Query: 432 LPSGAKKVLPSSNRGMVGIVAGGGR 506
LPSG K + + R +GI AG GR
Sbjct: 144 LPSGKVKQVNAKARATIGIAAGAGR 168
>UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L8 -
Encephalitozoon cuniculi
Length = 239
Score = 87.0 bits (206), Expect = 5e-16
Identities = 39/67 (58%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = +2
Query: 506 YDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTV-KRGTSAGR 682
+DKP+LKA A++K K + + +P VRGVAMNPVEH HGGGNHQH+GK +TV K+ S +
Sbjct: 161 HDKPLLKASVAHYKAKARGHVFPRVRGVAMNPVEHIHGGGNHQHVGKPTTVSKKDISQEQ 220
Query: 683 KVGLIAA 703
K+GL+ A
Sbjct: 221 KIGLVGA 227
Score = 72.1 bits (169), Expect = 1e-11
Identities = 31/85 (36%), Positives = 52/85 (61%)
Frame = +3
Query: 249 LLGKKATLEVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRV 428
L+G A +++GN+ + +P+G V ++E GD G A +G+++ V+ H + T +
Sbjct: 75 LIGDDAPIDIGNITKIKNVPEGMAVNSVESVYGDGGTFAMVNGSYSLVVNHRKETNETVI 134
Query: 429 KLPSGAKKVLPSSNRGMVGIVAGGG 503
K+PSG K + S R +VG+VAGGG
Sbjct: 135 KIPSGKKLTVSSECRCIVGVVAGGG 159
>UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17;
Euryarchaeota|Rep: 50S ribosomal protein L2P -
Methanopyrus kandleri
Length = 243
Score = 85.0 bits (201), Expect = 2e-15
Identities = 38/65 (58%), Positives = 46/65 (70%)
Frame = +2
Query: 509 DKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 688
+KP +KAG+ Y+ + K WP VRGVAMN V+HP GGGNHQ GK +T+ RG GRKV
Sbjct: 170 EKPFVKAGKKYYHMRSKGGKWPKVRGVAMNAVDHPFGGGNHQSPGKPTTIARGDPPGRKV 229
Query: 689 GLIAA 703
G IAA
Sbjct: 230 GHIAA 234
Score = 72.5 bits (170), Expect = 1e-11
Identities = 35/91 (38%), Positives = 54/91 (59%)
Frame = +3
Query: 255 GKKATLEVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKL 434
G A ++ GN +P+ +P+G + N+E + GD G+ ARA G +AT+I H D RT V+L
Sbjct: 87 GVSAEIKPGNTLPLAEIPEGVPIFNIEGQPGDGGKFARAPGCYATIIAH--DVGRTYVQL 144
Query: 435 PSGAKKVLPSSNRGMVGIVAGGGRMTNLF*K 527
PSG + R +G+++GGG+ F K
Sbjct: 145 PSGKVRTFDPRCRATIGVMSGGGKREKPFVK 175
Score = 43.2 bits (97), Expect = 0.008
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +2
Query: 2 RAQRRGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 178
R QR G G + + + + +G + R D E+ G + G V +++HDP R AP+A V F
Sbjct: 6 RPQRLGRGGPTYRAPSHRYRGRIEHRPYDEQEKKGKVVGKVVELLHDPARNAPVARVRFE 65
Query: 179 D 181
D
Sbjct: 66 D 66
>UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella
natans|Rep: Ribosomal protein L8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 281
Score = 81.8 bits (193), Expect = 2e-14
Identities = 39/84 (46%), Positives = 55/84 (65%)
Frame = +3
Query: 255 GKKATLEVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKL 434
G +A GNV+P+ +P G VCN+EEK GD G+LAR++G F V+ H+ T++KL
Sbjct: 117 GLQARPITGNVLPLFNIPNGVFVCNVEEKEGDGGKLARSAGAFVGVLSHSKYNNVTKLKL 176
Query: 435 PSGAKKVLPSSNRGMVGIVAGGGR 506
PS K+L S R +G+VAGGG+
Sbjct: 177 PSKKIKILSSFCRATIGVVAGGGK 200
Score = 81.4 bits (192), Expect = 2e-14
Identities = 36/66 (54%), Positives = 46/66 (69%)
Frame = +2
Query: 506 YDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRK 685
Y+KP+LKAG+ Y+K+K +P V+ + HPHGGGNHQHIG STV R + G+K
Sbjct: 201 YEKPLLKAGKNYYKFKSLNKKYPIVKIFYLGKENHPHGGGNHQHIGHPSTVSRRSPPGQK 260
Query: 686 VGLIAA 703
VGLIAA
Sbjct: 261 VGLIAA 266
Score = 34.7 bits (76), Expect = 2.8
Identities = 21/74 (28%), Positives = 33/74 (44%)
Frame = +2
Query: 5 AQRRGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 184
AQR+G + +R G +S+ E++ IKG++ D + P + F
Sbjct: 33 AQRKGKIGFQKQGSSRRIGKISYKSMTNEEKYSVIKGIISKFHIDTVKKVPAIKIKFNVT 92
Query: 185 YKFKTRKELFIAPE 226
FK EL+IA E
Sbjct: 93 KYFKNYYELYIAVE 106
>UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12;
Archaea|Rep: 50S ribosomal protein L2P - Methanosarcina
acetivorans
Length = 238
Score = 81.4 bits (192), Expect = 2e-14
Identities = 39/85 (45%), Positives = 56/85 (65%)
Frame = +3
Query: 255 GKKATLEVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKL 434
G A ++ GN++P+G +P+G +CN+E K D G+ R+SG +ATV+ H +A RT V +
Sbjct: 84 GDDAEVKPGNIVPIGNVPEGFFICNVESKPNDGGKFVRSSGVYATVVTH--EATRTAVSM 141
Query: 435 PSGAKKVLPSSNRGMVGIVAGGGRM 509
PSG K L R +VGIVAG GR+
Sbjct: 142 PSGNIKWLNPKCRAVVGIVAGSGRV 166
Score = 79.0 bits (186), Expect = 1e-13
Identities = 37/65 (56%), Positives = 44/65 (67%)
Frame = +2
Query: 509 DKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 688
D+P LKAG+ YHK K + +P V VAMNP +HP GGG +H GK +TV R GRKV
Sbjct: 167 DRPWLKAGKKYHKMKTRAAKYPRVSAVAMNPRDHPFGGGAWKHPGKPTTVSRNAPPGRKV 226
Query: 689 GLIAA 703
GLIAA
Sbjct: 227 GLIAA 231
>UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L2P -
Thermoplasma volcanium
Length = 234
Score = 78.6 bits (185), Expect = 2e-13
Identities = 39/65 (60%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +2
Query: 509 DKPILKAGRAYHKYKVKRNCWPY-VRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRK 685
D PILKAG H + K PY VRGVAMN V HPHGGGNHQH+G+ STV R GRK
Sbjct: 161 DAPILKAGTHVHYLRSKAKR-PYTVRGVAMNAVNHPHGGGNHQHVGRPSTVGRNAPPGRK 219
Query: 686 VGLIA 700
VG ++
Sbjct: 220 VGRLS 224
Score = 55.6 bits (128), Expect = 1e-06
Identities = 29/83 (34%), Positives = 41/83 (49%)
Frame = +3
Query: 255 GKKATLEVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKL 434
G T+ G + +P G+ V N+E GD G R++G FA V+ H R +KL
Sbjct: 79 GNVDTINPGTTTVLANIPDGSYVYNIESSPGDGGEFCRSAGTFALVVSH---GSRVTLKL 135
Query: 435 PSGAKKVLPSSNRGMVGIVAGGG 503
PSG+ + R VG+VA G
Sbjct: 136 PSGSMRDFDPRCRATVGVVAASG 158
>UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L2
- Candidatus Nitrosopumilus maritimus SCM1
Length = 244
Score = 77.4 bits (182), Expect = 4e-13
Identities = 37/83 (44%), Positives = 51/83 (61%)
Frame = +3
Query: 255 GKKATLEVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKL 434
G K+ +E GNV+ + +P GTIVCN+E+ GD G + +++G ATV H + VKL
Sbjct: 85 GLKSKIEKGNVISIQNIPDGTIVCNIEKHFGDGGAIVKSAGTDATVFSHGDEG--VTVKL 142
Query: 435 PSGAKKVLPSSNRGMVGIVAGGG 503
PSG L NR M+G +AGGG
Sbjct: 143 PSGKFTTLNPKNRAMIGTLAGGG 165
Score = 75.8 bits (178), Expect = 1e-12
Identities = 33/65 (50%), Positives = 42/65 (64%)
Frame = +2
Query: 509 DKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 688
++P + AG + +K K +P VRGVA HPHGGG HQH+G++STV R T G KV
Sbjct: 168 ERPFMSAGGKWRNFKAKGKKYPIVRGVAQAAYVHPHGGGRHQHVGQSSTVSRDTPPGAKV 227
Query: 689 GLIAA 703
G IAA
Sbjct: 228 GSIAA 232
>UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L2P -
Nanoarchaeum equitans
Length = 238
Score = 73.7 bits (173), Expect = 5e-12
Identities = 42/110 (38%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
Frame = +3
Query: 207 SSSLLPKXLHRPI---CLLGKKATLEVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASG 377
+ SLLP L + GK+A +G++ P+ +P+GT + LE GD G+L RASG
Sbjct: 65 AQSLLPAPLGISVGDTVYYGKEAPNAIGSIKPLSEIPEGTKIYMLENNPGDGGKLVRASG 124
Query: 378 NFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRMTNLF*K 527
+FA ++ D + V+LPSG K L ++ R ++G++AGGGR F K
Sbjct: 125 DFALLVQKLGD--KVIVQLPSGQFKTLSANARAVIGVIAGGGRKEKPFVK 172
Score = 58.8 bits (136), Expect = 1e-07
Identities = 27/65 (41%), Positives = 34/65 (52%)
Frame = +2
Query: 509 DKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 688
+KP +KAG Y+ + WP V GV N +HP GG H + K TV + GRKV
Sbjct: 167 EKPFVKAGNKYYWASSRNRHWPVVNGVKKNASDHPFGGKRHSNHSKPFTVSKWAPPGRKV 226
Query: 689 GLIAA 703
G I A
Sbjct: 227 GYIGA 231
>UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2;
Crenarchaeota|Rep: Ribosomal protein L2 - Cenarchaeum
symbiosum
Length = 243
Score = 72.9 bits (171), Expect = 8e-12
Identities = 31/65 (47%), Positives = 42/65 (64%)
Frame = +2
Query: 509 DKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 688
++P + AG + +++ K +P VRGVA HPHGGG HQH+G++STV R G KV
Sbjct: 167 ERPFMSAGGKWRRFRSKGRKYPIVRGVAQAAYVHPHGGGRHQHVGQSSTVSRNAPPGAKV 226
Query: 689 GLIAA 703
G IAA
Sbjct: 227 GSIAA 231
Score = 70.1 bits (164), Expect = 6e-11
Identities = 36/83 (43%), Positives = 48/83 (57%)
Frame = +3
Query: 255 GKKATLEVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKL 434
G K+ + GNV+ V +P GT VCN+E+ GD G + +++G ATV H +KL
Sbjct: 84 GLKSEIRDGNVISVQNIPDGTTVCNVEKHYGDGGAIVKSAGGNATVFSHGEGG--VVLKL 141
Query: 435 PSGAKKVLPSSNRGMVGIVAGGG 503
PSG L NR MVG +AGGG
Sbjct: 142 PSGRFSTLNPKNRAMVGTLAGGG 164
Score = 35.1 bits (77), Expect = 2.1
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 8 QRRGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRD 181
+RRG G + F + T + K + + E+ +G V D++H+ GR APLA + F D
Sbjct: 8 RRRGRGGMQFRAATTGKIARAKYPAFELGEQR---EGTVIDLVHERGRDAPLAKIRFED 63
>UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8
protein - Rattus norvegicus (Rat)
Length = 47
Score = 68.5 bits (160), Expect = 2e-10
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +2
Query: 2 RAQRRGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVK 124
R QR+GAGSVF +H K RKGA +LR++D+AERHGYIKG+VK
Sbjct: 6 RGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVK 46
>UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|Rep:
Ribosomal protein L8 - Sus scrofa (Pig)
Length = 106
Score = 64.1 bits (149), Expect = 4e-09
Identities = 30/67 (44%), Positives = 42/67 (62%)
Frame = -3
Query: 709 PASSNKTNFATSRCSSLDSGSLTYMLMVTTTVRMLYRVHGNTTYIWPAVTFDLVLVVCPS 530
PASSN+T+F SR S D +L+V T+ ML+RVHG+T + WPA+ L+LV+ +
Sbjct: 17 PASSNETHFPASRGISADGRGFANVLVVATSKGMLHRVHGHTPHAWPAIPLGLILVIGTA 76
Query: 529 SFQNRFV 509
QN V
Sbjct: 77 GLQNGLV 83
>UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;
n=2; Embryophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Marchantia polymorpha (Liverwort)
Length = 501
Score = 58.4 bits (135), Expect = 2e-07
Identities = 29/73 (39%), Positives = 43/73 (58%)
Frame = +3
Query: 276 VGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 455
VGN +P+ +P GT V N+E G +L RA+G FA +I + + V+LPSG K+
Sbjct: 359 VGNCIPLAKIPIGTWVHNIERNPGQGAKLTRAAGTFAQIIQKVENTPQCIVRLPSGVDKL 418
Query: 456 LPSSNRGMVGIVA 494
+ S R +GIV+
Sbjct: 419 IDSRCRATIGIVS 431
Score = 42.3 bits (95), Expect = 0.014
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +2
Query: 572 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 658
P VRGVAMNPV+HPHGGG + G +V
Sbjct: 453 PIVRGVAMNPVDHPHGGGEGRTKGGRPSV 481
>UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep:
Ribosomal protein L2 - Zea mays (Maize)
Length = 448
Score = 57.2 bits (132), Expect = 5e-07
Identities = 39/120 (32%), Positives = 63/120 (52%)
Frame = +3
Query: 183 HTSSRQGRSSSLLPKXLHRPICLLGKKATLEVGNVMPVGAMPKGTIVCNLEEKMGDRGRL 362
+ SS+ +SS+ P L ++ + +VGN +P+ GT V N+E + G G++
Sbjct: 267 YNSSKPSKSSASSPYSLENQFDIIDLNS--KVGNCIPLANARIGTWVHNIECRPGQGGKM 324
Query: 363 ARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRMTNLF*KLEGHT 542
RA+G +A V+ P AK ++LPSGA+K + S +GIV+ T K GH+
Sbjct: 325 VRAAGTYAKVV-QEPGAKCV-LRLPSGAEKAVDSRCHATIGIVSNPSHGTRKLRK-AGHS 381
Score = 43.2 bits (97), Expect = 0.008
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = +2
Query: 572 PYVRGVAMNPVEHPHGGGNHQHIGKASTVK---RGTSAGRKVGLIAA 703
P VRGVAMNPV+HPHGGG + G +V + T AG + +A+
Sbjct: 388 PVVRGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKAGYRSPSVAS 434
>UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90;
Bacteria|Rep: 50S ribosomal protein L2 - Lactobacillus
plantarum
Length = 279
Score = 56.4 bits (130), Expect = 8e-07
Identities = 33/97 (34%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Frame = +3
Query: 204 RSSSLLPKXLHRPICLL-GKKATLEVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGN 380
+S L PK L + + G +A ++VGN +P+ +P GT++ N+E K G G+LAR++G
Sbjct: 101 KSYILAPKGLEVGMQVQSGAEADIKVGNALPLTNIPVGTVIHNIELKPGKGGQLARSAGT 160
Query: 381 FATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 491
A ++G + K V+L SG +++ ++R +G V
Sbjct: 161 SAQLLG--KEGKYAIVRLSSGEVRLVLLTSRATIGTV 195
Score = 36.3 bits (80), Expect = 0.90
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +2
Query: 524 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 625
KAGR +++ KR P VRG MNP +HPHGGG
Sbjct: 207 KAGRT--RWQGKR---PTVRGSVMNPNDHPHGGG 235
>UniRef50_A3LNH9 Cluster: Predicted protein; n=5;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 364
Score = 54.4 bits (125), Expect = 3e-06
Identities = 23/75 (30%), Positives = 46/75 (61%)
Frame = +3
Query: 270 LEVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 449
++ GN +P+ +P G+I+ N+ G RG+L +A+G FA ++ +P+ K+ +KL SG
Sbjct: 212 MQRGNCLPLHMLPVGSIIHNIGLHPGGRGQLVKAAGTFARLLSKHPEEKKVVIKLSSGEH 271
Query: 450 KVLPSSNRGMVGIVA 494
+ + + +G+V+
Sbjct: 272 RYVHMNCHATLGVVS 286
Score = 40.3 bits (90), Expect = 0.055
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +2
Query: 524 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 625
KAGR+ H+ K P VRGVAMN +HPHGGG
Sbjct: 297 KAGRSRHRGKR-----PMVRGVAMNAFDHPHGGG 325
>UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2;
n=423; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 274
Score = 54.4 bits (125), Expect = 3e-06
Identities = 29/83 (34%), Positives = 47/83 (56%)
Frame = +3
Query: 255 GKKATLEVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKL 434
G + +++GN +P+ MP GT + N+E +G G+LARA+G A +I + K +KL
Sbjct: 117 GTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGKSATLKL 174
Query: 435 PSGAKKVLPSSNRGMVGIVAGGG 503
PSG +++ + VG V G
Sbjct: 175 PSGEVRLISKNCSATVGQVGNVG 197
Score = 41.5 bits (93), Expect = 0.024
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = +2
Query: 566 CW----PYVRGVAMNPVEHPHGGG 625
CW P VRGV MNPV+HPHGGG
Sbjct: 210 CWLGKRPVVRGVVMNPVDHPHGGG 233
>UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular
organisms|Rep: Ribosomal protein L2 - Physcomitrella
patens (Moss)
Length = 463
Score = 53.6 bits (123), Expect = 6e-06
Identities = 29/73 (39%), Positives = 42/73 (57%)
Frame = +3
Query: 276 VGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 455
VGN + + +P GT V N+E G +L RA+G FA +I + + V+LPSG K+
Sbjct: 321 VGNCVSLANIPIGTWVHNIEWNPGQGAKLIRAAGTFAQIIKKFENTPQCIVRLPSGVDKL 380
Query: 456 LPSSNRGMVGIVA 494
+ S R VGIV+
Sbjct: 381 IDSRCRATVGIVS 393
Score = 42.3 bits (95), Expect = 0.014
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +2
Query: 572 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 658
P VRGVAMNPV+HPHGGG + G +V
Sbjct: 415 PIVRGVAMNPVDHPHGGGEGRTKGGRPSV 443
>UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular
organisms|Rep: 50S ribosomal protein L2 - Mesoplasma
florum (Acholeplasma florum)
Length = 281
Score = 53.6 bits (123), Expect = 6e-06
Identities = 25/66 (37%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Frame = +3
Query: 264 ATLEVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSG 443
A ++VGN P+ +P+GT++ N+E K G G++AR++G ++G + D K ++L SG
Sbjct: 123 ADIKVGNAAPLKNIPEGTLIHNVELKPGKGGQMARSAGTSVQILGKDDDGKYVTLRLTSG 182
Query: 444 -AKKVL 458
+KVL
Sbjct: 183 EVRKVL 188
Score = 38.3 bits (85), Expect = 0.22
Identities = 21/41 (51%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Frame = +2
Query: 551 KVKRNCW----PYVRGVAMNPVEHPHGGG-NHQHIGKASTV 658
K RN W P VRG MNP +HPHGGG IG+ S V
Sbjct: 210 KAGRNRWRGIRPTVRGSVMNPNDHPHGGGEGRTPIGRKSPV 250
>UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellular
organisms|Rep: 50S ribosomal protein L2 - Aquifex
aeolicus
Length = 304
Score = 52.8 bits (121), Expect = 1e-05
Identities = 27/74 (36%), Positives = 44/74 (59%)
Frame = +3
Query: 270 LEVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 449
++ GN MP+ +P+GTIV N+E G G++ARA+G +A V+G + V++PSG
Sbjct: 149 IKPGNAMPLKYIPEGTIVHNIEFIPGKGGQIARAAGTWAQVLGRSTRKGYVLVRMPSGEV 208
Query: 450 KVLPSSNRGMVGIV 491
+++ VG V
Sbjct: 209 RMIHERCMATVGRV 222
Score = 41.9 bits (94), Expect = 0.018
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2
Query: 572 PYVRGVAMNPVEHPHGGGNHQHIGK 646
P+ RG AMNPV+HPHGGG + GK
Sbjct: 245 PHTRGTAMNPVDHPHGGGEGRTRGK 269
>UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellular
organisms|Rep: 50S ribosomal protein L2 - Brucella
melitensis
Length = 277
Score = 52.0 bits (119), Expect = 2e-05
Identities = 26/80 (32%), Positives = 47/80 (58%)
Frame = +3
Query: 255 GKKATLEVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKL 434
G ++ GN MP+ +MP GTI+ N+E G G++AR++G +A ++G D ++L
Sbjct: 119 GNSVDVKPGNAMPLSSMPVGTIIHNVELMPGKGGQIARSAGTYAQLVGR--DQGMAILRL 176
Query: 435 PSGAKKVLPSSNRGMVGIVA 494
SG ++++ + VG V+
Sbjct: 177 NSGEQRLVSGACFASVGAVS 196
Score = 44.8 bits (101), Expect = 0.003
Identities = 23/40 (57%), Positives = 29/40 (72%)
Frame = +2
Query: 524 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 643
KAGR+ ++ KR P+VRGVAMNPV+HPHGGG + G
Sbjct: 207 KAGRSV--WRGKR---PHVRGVAMNPVDHPHGGGEGRTSG 241
>UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;
n=24; Spermatophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Oryza sativa subsp. japonica (Rice)
Length = 502
Score = 51.2 bits (117), Expect = 3e-05
Identities = 28/74 (37%), Positives = 45/74 (60%)
Frame = +3
Query: 273 EVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKK 452
+VGN +P+ + GT V ++E G +LARA+G +A +I A + V+LPSG +K
Sbjct: 359 KVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKII--KEPASQCLVRLPSGVEK 416
Query: 453 VLPSSNRGMVGIVA 494
++ S R +GIV+
Sbjct: 417 LIDSRCRATIGIVS 430
Score = 44.8 bits (101), Expect = 0.003
Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Frame = +2
Query: 572 PYVRGVAMNPVEHPHGGGNHQHIGKASTVK---RGTSAGRKVGL 694
P VRGVAMNPV+HPHGGG + G +V + T AG + G+
Sbjct: 452 PIVRGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKAGFRAGV 495
>UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome.
precursor; n=9; Pezizomycotina|Rep: Contig An01c0260,
complete genome. precursor - Aspergillus niger
Length = 414
Score = 50.8 bits (116), Expect = 4e-05
Identities = 24/72 (33%), Positives = 41/72 (56%)
Frame = +3
Query: 279 GNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 458
GN +P+ MP GT+V N+ + G G+L R++G FATVI ++ ++L SG +++
Sbjct: 213 GNCLPLHMMPVGTLVFNVGLRPGQGGQLCRSAGTFATVIAKERISQHVTIRLQSGEVRLI 272
Query: 459 PSSNRGMVGIVA 494
VG+ +
Sbjct: 273 HKDCCATVGVAS 284
Score = 37.9 bits (84), Expect = 0.30
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +2
Query: 563 NCWPYVRGVAMNPVEHPHGGGNHQHIG 643
N P VRG+AMN EHPHGGG + G
Sbjct: 303 NIRPTVRGLAMNAAEHPHGGGRGKSKG 329
>UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and
organelle form; n=5; cellular organisms|Rep: Ribosomal
protein L2, bacterial and organelle form - Ostreococcus
tauri
Length = 294
Score = 50.4 bits (115), Expect = 5e-05
Identities = 24/83 (28%), Positives = 49/83 (59%)
Frame = +3
Query: 255 GKKATLEVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKL 434
G ++ ++VGN +P+ +P T + N+E G G+L R++G+ AT++ D V+L
Sbjct: 145 GPESDIKVGNALPLKNIPLQTTIHNIELVPGRGGQLCRSAGSAATLVKKADDGGYCVVRL 204
Query: 435 PSGAKKVLPSSNRGMVGIVAGGG 503
PSG ++++ + +G+++ G
Sbjct: 205 PSGEQRLVLENCMATIGMLSNRG 227
>UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein L2 - Chlorokybus
atmophyticus (Soil alga)
Length = 368
Score = 49.6 bits (113), Expect = 9e-05
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +3
Query: 255 GKKATLEVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVI-GHNPDAKRTRVK 431
G + GN +P+ ++P GT+V N+E G G++ RA+G A +I HN K ++
Sbjct: 213 GPNVEIRTGNALPLISIPLGTLVHNIELYPGSGGQVVRAAGTSAQLIKKHN---KYAILR 269
Query: 432 LPSGAKKVLPSSNRGMVGIVA 494
LPSG K P +GIV+
Sbjct: 270 LPSGELKSFPLQCMATIGIVS 290
Score = 41.9 bits (94), Expect = 0.018
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2
Query: 572 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 658
P VRGVAMNP++HPHGGG + G +V
Sbjct: 312 PTVRGVAMNPIDHPHGGGEGRTSGGRPSV 340
>UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 169
Score = 48.8 bits (111), Expect = 2e-04
Identities = 25/73 (34%), Positives = 41/73 (56%)
Frame = +3
Query: 276 VGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 455
+G+ MP+G M GTI+ N+E G ++ RA+G A ++ P + +KLPSG K
Sbjct: 14 IGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKIL-KEPAKGKCLIKLPSGDTKW 72
Query: 456 LPSSNRGMVGIVA 494
+ + R +G V+
Sbjct: 73 INAKCRATIGTVS 85
Score = 40.7 bits (91), Expect = 0.042
Identities = 18/30 (60%), Positives = 21/30 (70%), Gaps = 4/30 (13%)
Frame = +2
Query: 548 YKVKRNCW----PYVRGVAMNPVEHPHGGG 625
YK ++ W P VRGVAMNP +HPHGGG
Sbjct: 95 YKAGQSRWLGIRPKVRGVAMNPCDHPHGGG 124
>UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2;
Streptophytina|Rep: Ribosomal protein L2 - Chara
vulgaris (Common stonewort)
Length = 262
Score = 47.2 bits (107), Expect = 5e-04
Identities = 25/73 (34%), Positives = 40/73 (54%)
Frame = +3
Query: 276 VGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 455
+GN + + +P GT++ N+E G + RA+G FA +I R++LPSGA
Sbjct: 122 LGNCVQLAYIPVGTLIHNIEWNPGQGAKFVRAAGTFAQLI--QKHEATVRLRLPSGALAS 179
Query: 456 LPSSNRGMVGIVA 494
+ S R +GIV+
Sbjct: 180 INSQCRATIGIVS 192
Score = 42.3 bits (95), Expect = 0.014
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +2
Query: 572 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 658
P VRGVAMNPV+HPHGGG + G +V
Sbjct: 214 PVVRGVAMNPVDHPHGGGEGRTKGGRRSV 242
>UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondrial
precursor; n=6; Ascomycota|Rep: 54S ribosomal protein
RML2, mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 393
Score = 46.8 bits (106), Expect = 6e-04
Identities = 22/76 (28%), Positives = 41/76 (53%)
Frame = +3
Query: 267 TLEVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGA 446
T + GN +P+ +P GTI+ N+ G+ R++G +A V+ P+ K+ V+L SG
Sbjct: 234 TTQRGNCLPISMIPIGTIIHNVGITPVGPGKFCRSAGTYARVLAKLPEKKKAIVRLQSGE 293
Query: 447 KKVLPSSNRGMVGIVA 494
+ + +G+V+
Sbjct: 294 HRYVSLEAVATIGVVS 309
Score = 36.3 bits (80), Expect = 0.90
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +2
Query: 572 PYVRGVAMNPVEHPHGGG 625
P VRGVAMN +HPHGGG
Sbjct: 331 PTVRGVAMNKCDHPHGGG 348
>UniRef50_O23283 Cluster: Putative uncharacterized protein; n=1;
Arabidopsis thaliana|Rep: Putative uncharacterized
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 724
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/27 (74%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = +2
Query: 545 KYKVKRNCWPYVRGVAM-NPVEHPHGG 622
K +KRN W VRGVAM NPVEHPHGG
Sbjct: 411 KLMIKRNMWAKVRGVAMMNPVEHPHGG 437
>UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria
gruberi|Rep: Ribosomal protein L2 - Naegleria gruberi
Length = 268
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +2
Query: 572 PYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTS 673
P VRGVAMNPV+HPHGGG + KAS + S
Sbjct: 222 PTVRGVAMNPVDHPHGGGEGKKSKKASPTNKWAS 255
>UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 719
Score = 45.6 bits (103), Expect = 0.001
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = -2
Query: 587 HHVHMASSYV*PCTCGMPFQLSK*VCHTSTSSNNTDHASVA*WQNLLGSRR*LYSCTLSI 408
HH+ +ASSY T L + T+T+SNNT++ SV WQN L +RR L + T +
Sbjct: 17 HHIPLASSYASSTT-----SLQDWLVDTTTASNNTNYGSVGRWQNFLDTRRQLVTGTHVL 71
Query: 407 RIVS--NHSGEVSR 372
R+ S N +V R
Sbjct: 72 RLASCQNDQSQVVR 85
>UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17;
Bacteria|Rep: 50S ribosomal protein L2 - Mycoplasma
pneumoniae
Length = 287
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/75 (30%), Positives = 43/75 (57%)
Frame = +3
Query: 270 LEVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 449
++ G MP+ +P+GT V N+E G++AR++G++A ++G + K ++L SG
Sbjct: 130 IKPGFSMPLAFIPEGTQVHNIELHPKGGGQIARSAGSYARILGQDETGKYVILQLLSGET 189
Query: 450 KVLPSSNRGMVGIVA 494
+ R VG+V+
Sbjct: 190 RKFLKECRATVGVVS 204
Score = 38.7 bits (86), Expect = 0.17
Identities = 20/34 (58%), Positives = 21/34 (61%)
Frame = +2
Query: 524 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 625
KAGR H R P VRG AMNP +HPHGGG
Sbjct: 215 KAGRNRH-----RGIRPTVRGSAMNPNDHPHGGG 243
>UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus
Carsonella ruddii|Rep: Ribosomal protein L2 - Carsonella
ruddii
Length = 235
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/36 (58%), Positives = 24/36 (66%), Gaps = 4/36 (11%)
Frame = +2
Query: 548 YKVKRNCW----PYVRGVAMNPVEHPHGGGNHQHIG 643
YK +N W P VRGVAMNPV+HPHGGG + G
Sbjct: 180 YKAGQNRWKGIRPTVRGVAMNPVDHPHGGGEGKTSG 215
Score = 34.3 bits (75), Expect = 3.6
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Frame = +2
Query: 14 RGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRD---P 184
R G + V H K R +D+ I G+V+ I +DP R A +A++ + D
Sbjct: 18 RSRGKISVRHIGG-KTKNFYRIIDFKRNKYNILGIVESIHYDPNRNAKIALIKYLDGDKK 76
Query: 185 YKFKTRKELFIAPEXSTQANLFIGKESNS 271
Y KT EL ++ + + N I K NS
Sbjct: 77 YIIKT-NELEVSDKIISSLNNVILKPGNS 104
>UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep:
Ribosomal protein L2 - Carsonella ruddii
Length = 235
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/36 (58%), Positives = 24/36 (66%), Gaps = 4/36 (11%)
Frame = +2
Query: 548 YKVKRNCW----PYVRGVAMNPVEHPHGGGNHQHIG 643
YK +N W P VRGVAMNPV+HPHGGG + G
Sbjct: 180 YKAGQNRWRGIRPTVRGVAMNPVDHPHGGGEGKTSG 215
Score = 37.5 bits (83), Expect = 0.39
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +2
Query: 14 RGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYK 190
R G + V H K K R +D+ IKG+V+ I +DP R A +A++ + D K
Sbjct: 18 RSRGKISVRHIGK-KHKKFYRKIDFKRDKSNIKGIVESIHYDPNRNARIALIKYLDGEK 75
>UniRef50_Q8LWZ7 Cluster: Ribosomal protein L2; n=3;
Phaeophyceae|Rep: Ribosomal protein L2 - Laminaria
digitata
Length = 254
Score = 44.0 bits (99), Expect = 0.005
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +2
Query: 572 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 658
P VRGVAMNP++HPHGGG + G S+V
Sbjct: 201 PTVRGVAMNPIDHPHGGGEGKTSGGRSSV 229
>UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1;
Thraustochytrium aureum|Rep: Ribosomal protein L2 -
Thraustochytrium aureum
Length = 236
Score = 43.6 bits (98), Expect = 0.006
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +2
Query: 560 RNCWPYVRGVAMNPVEHPHGGG 625
RN P VRGVAMNPV+HPHGGG
Sbjct: 190 RNKRPKVRGVAMNPVDHPHGGG 211
>UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10;
Magnoliophyta|Rep: 50S ribosomal protein L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 144
Score = 43.6 bits (98), Expect = 0.006
Identities = 25/67 (37%), Positives = 37/67 (55%)
Frame = +3
Query: 303 MPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMV 482
MP GT + N+E +G G+LARA+G A +I + K +KLPSG +++ + V
Sbjct: 3 MPLGTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATV 60
Query: 483 GIVAGGG 503
G V G
Sbjct: 61 GQVGNVG 67
Score = 41.5 bits (93), Expect = 0.024
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = +2
Query: 566 CW----PYVRGVAMNPVEHPHGGG 625
CW P VRGV MNPV+HPHGGG
Sbjct: 80 CWLGKRPVVRGVVMNPVDHPHGGG 103
>UniRef50_Q9TAJ4 Cluster: Ribosomal protein L2; n=1; Cafeteria
roenbergensis|Rep: Ribosomal protein L2 - Cafeteria
roenbergensis
Length = 252
Score = 42.7 bits (96), Expect = 0.010
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2
Query: 572 PYVRGVAMNPVEHPHGGGNHQHIGKASTVKR 664
P VRGVAMNP++HPHGGG + G +V +
Sbjct: 196 PSVRGVAMNPIDHPHGGGEGKTSGGRPSVSK 226
>UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6;
Eurotiomycetidae|Rep: 50S ribosomal protein L2 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 404
Score = 42.7 bits (96), Expect = 0.010
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +3
Query: 279 GNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 416
GN +P+ +P GT++ N+ + G G+L R++G +ATVI D K
Sbjct: 212 GNCLPLHMIPVGTLIFNVGLRPGKGGQLCRSAGTYATVISKGSDTK 257
Score = 36.7 bits (81), Expect = 0.68
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 563 NCWPYVRGVAMNPVEHPHGGGNHQHIG 643
N P VRG+AMN +HPHGGG + G
Sbjct: 334 NIRPTVRGLAMNAADHPHGGGRGKSKG 360
>UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Acanthamoeba castellanii|Rep: Mitochondrial 60S
ribosomal protein L2 - Acanthamoeba castellanii (Amoeba)
Length = 253
Score = 42.7 bits (96), Expect = 0.010
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +2
Query: 572 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 658
P VRGVAMNPV+HPHGGG + G +V
Sbjct: 199 PVVRGVAMNPVDHPHGGGQGKTSGGRPSV 227
>UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondrial;
n=2; Saccharomycetales|Rep: 60S ribosomal protein RML2,
mitochondrial - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 376
Score = 42.3 bits (95), Expect = 0.014
Identities = 20/75 (26%), Positives = 41/75 (54%)
Frame = +3
Query: 270 LEVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 449
L+ GN +P+ +P G+I+ + R +L RA+G F ++G + + + +KL SG +
Sbjct: 220 LQRGNCLPLRMIPVGSIIHCIGLNSQRRSQLVRAAGTFGKILGKDQERQLAIIKLCSGEQ 279
Query: 450 KVLPSSNRGMVGIVA 494
+ + +G+V+
Sbjct: 280 RYISLDCHATLGVVS 294
Score = 37.5 bits (83), Expect = 0.39
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +2
Query: 524 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 625
KAGR +Y KR P VRG+AMN +HPHGGG
Sbjct: 305 KAGR--RRYLGKR---PVVRGMAMNAKDHPHGGG 333
>UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellular
organisms|Rep: 50S ribosomal protein L2 - Methylococcus
capsulatus
Length = 281
Score = 42.3 bits (95), Expect = 0.014
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = +2
Query: 560 RNCWPYVRGVAMNPVEHPHGGGNHQHIG 643
R P VRGVAMNPV+HPHGGG + G
Sbjct: 220 RGVRPTVRGVAMNPVDHPHGGGEGRTSG 247
Score = 36.7 bits (81), Expect = 0.68
Identities = 20/80 (25%), Positives = 44/80 (55%)
Frame = +3
Query: 255 GKKATLEVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKL 434
G+ A ++VGN +P+ +P GT+V +E K G + AR++G ++ + + +++
Sbjct: 125 GEFAAIKVGNSLPLRNIPVGTVVHCVEGKPGKGAQYARSAGTSIQLVA--KEGEYATLRM 182
Query: 435 PSGAKKVLPSSNRGMVGIVA 494
SG + + + + +G V+
Sbjct: 183 RSGEMRKVLADCKATIGEVS 202
>UniRef50_A7NTF6 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 148
Score = 41.5 bits (93), Expect = 0.024
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = +2
Query: 566 CW----PYVRGVAMNPVEHPHGGG 625
CW P VRGV MNPV+HPHGGG
Sbjct: 84 CWLGKRPVVRGVVMNPVDHPHGGG 107
>UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5;
Tracheophyta|Rep: Ribosomal protein L2 - Selaginella
uncinata (Blue spikemoss) (Peacock spikemoss)
Length = 282
Score = 40.3 bits (90), Expect = 0.055
Identities = 25/77 (32%), Positives = 37/77 (48%)
Frame = +3
Query: 255 GKKATLEVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKL 434
G A VGN P MP GT++ +E G G+ ARA+G A + + +R L
Sbjct: 119 GPGAPTTVGNAPPPTHMPLGTVMHGIEVAPGKGGQSARAAGAPAKPVAKEGQSATSR--L 176
Query: 435 PSGAKKVLPSSNRGMVG 485
P G + +P + +VG
Sbjct: 177 PPGEVRSIPQNRPAVVG 193
Score = 39.9 bits (89), Expect = 0.073
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 572 PYVRGVAMNPVEHPHGGG 625
P VRGV MNPV+HPHGGG
Sbjct: 218 PRVRGVVMNPVDHPHGGG 235
>UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3;
Dictyosteliida|Rep: Ribosomal protein L2 - Dictyostelium
citrinum
Length = 266
Score = 39.9 bits (89), Expect = 0.073
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +2
Query: 509 DKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGG 622
+K I K+ +A K + P VRG+AMNPV+HPHGG
Sbjct: 182 EKKIKKSKKASESRK--KGIRPIVRGLAMNPVDHPHGG 217
Score = 33.9 bits (74), Expect = 4.8
Identities = 20/79 (25%), Positives = 41/79 (51%)
Frame = +3
Query: 258 KKATLEVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 437
K+ L+VG + +P+G ++ N+E +L+RA+G + +I + K + VKL
Sbjct: 102 KQGILQVGYTTKIKNIPEGILINNIELMENSGSKLSRAAGTSSLII-KQYNKKYSLVKLS 160
Query: 438 SGAKKVLPSSNRGMVGIVA 494
S +++ + +G V+
Sbjct: 161 SKECRLISNECYATIGTVS 179
>UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas
danica|Rep: Ribosomal protein L2 - Ochromonas danica
Length = 261
Score = 39.5 bits (88), Expect = 0.097
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +2
Query: 572 PYVRGVAMNPVEHPHGG 622
P VRGVAMNPV+HPHGG
Sbjct: 220 PIVRGVAMNPVDHPHGG 236
Score = 36.3 bits (80), Expect = 0.90
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +3
Query: 303 MPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMV 482
+P GTI+ N+ + + +++GNFA +I D + ++KLPSG P ++ +
Sbjct: 137 IPTGTIINNIGNINSKKSKYVKSAGNFAELI--QKDTENAKLKLPSGKIIKHPITSLATI 194
Query: 483 GIVA 494
G ++
Sbjct: 195 GSIS 198
>UniRef50_A7AXH0 Cluster: Rpl2; n=1; Babesia bovis|Rep: Rpl2 -
Babesia bovis
Length = 242
Score = 39.5 bits (88), Expect = 0.097
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +2
Query: 548 YKVKRNCWPYVRGVAMNPVEHPHGGG 625
YK+K P VRG AMN +HPHGGG
Sbjct: 188 YKIKLGRRPKVRGTAMNACDHPHGGG 213
>UniRef50_Q9MG94 Cluster: Ribosomal protein L2; n=2; Chrysodidymus
synuroideus|Rep: Ribosomal protein L2 - Chrysodidymus
synuroideus
Length = 262
Score = 38.7 bits (86), Expect = 0.17
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2
Query: 572 PYVRGVAMNPVEHPHGG 622
P VRG+AMNPV+HPHGG
Sbjct: 220 PSVRGIAMNPVDHPHGG 236
>UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria
tenella|Rep: Ribosomal protein L2 - Eimeria tenella
Length = 273
Score = 38.7 bits (86), Expect = 0.17
Identities = 17/28 (60%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +2
Query: 572 PYVRGVAMNPVEHPHGGGNHQH-IGKAS 652
P VRGVAMN +HPHGGG ++ IG++S
Sbjct: 213 PKVRGVAMNACDHPHGGGEGKNSIGRSS 240
>UniRef50_Q4UCG9 Cluster: 50S ribosomal protein L2, putative; n=8;
Aconoidasida|Rep: 50S ribosomal protein L2, putative -
Theileria annulata
Length = 334
Score = 38.7 bits (86), Expect = 0.17
Identities = 19/34 (55%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +2
Query: 533 RAYHKYKVKRNC-W-PYVRGVAMNPVEHPHGGGN 628
R K +RN W P VRG+AMN HPHGGGN
Sbjct: 250 RILKKAGTRRNMGWRPVVRGIAMNANSHPHGGGN 283
>UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 382
Score = 38.7 bits (86), Expect = 0.17
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +3
Query: 279 GNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 458
GN +P+ +P GT+V N+ +M R++G +AT+I + + K+ +G V+
Sbjct: 154 GNCLPMHMIPVGTVVYNVGSRMDGGAVFCRSAGTYATIISKEEETRDDGTKVMTGKHVVV 213
>UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein L2 - Opitutaceae
bacterium TAV2
Length = 288
Score = 38.3 bits (85), Expect = 0.22
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 4/35 (11%)
Frame = +2
Query: 551 KVKRNCW----PYVRGVAMNPVEHPHGGGNHQHIG 643
K RN W P VRG+ MNPV+HP+GGG + G
Sbjct: 210 KAGRNRWLGKRPRVRGMVMNPVDHPNGGGQGKSKG 244
>UniRef50_A4Q378 Cluster: Translation protein SH3-like; n=1;
Medicago truncatula|Rep: Translation protein SH3-like -
Medicago truncatula (Barrel medic)
Length = 52
Score = 38.3 bits (85), Expect = 0.22
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +2
Query: 578 VRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGL 694
VRGV MNPV+HPHGGG G+A K+ +GL
Sbjct: 11 VRGVVMNPVDHPHGGGE----GRAPIDKKKKKTLNSLGL 45
>UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02322 protein - Schistosoma
japonicum (Blood fluke)
Length = 393
Score = 37.9 bits (84), Expect = 0.30
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 279 GNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVI 395
G+ PVGA+P GT++ E K G R +G+ ATV+
Sbjct: 186 GDAYPVGALPVGTVISQFEIKPGQGALFCRTAGSSATVV 224
>UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2;
Filobasidiella neoformans|Rep: Ribosomal protein L2,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 481
Score = 37.9 bits (84), Expect = 0.30
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +3
Query: 258 KKATLEVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGH 401
+ TL+ GNV+P+ +P G V N+ + R +L R++G F V+ H
Sbjct: 290 RTVTLKPGNVLPLYLIPPGMQVHNISLTVDGRMQLCRSAGTFGQVVSH 337
Score = 37.5 bits (83), Expect = 0.39
Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
Frame = +2
Query: 551 KVKRNCW----PYVRGVAMNPVEHPHGGGNHQHIG 643
K RN W P+VRG AMN V+H HGGG + G
Sbjct: 405 KAGRNRWLGRRPHVRGAAMNSVDHAHGGGRGKSKG 439
>UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-PA -
Drosophila pseudoobscura (Fruit fly)
Length = 297
Score = 37.5 bits (83), Expect = 0.39
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +3
Query: 279 GNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 440
G+ P+GA+P GT + LE+ G + L A+G F T++ D + V+LPS
Sbjct: 164 GDAYPLGALPVGTRIHCLEKNPGQQCHLIHAAGTFGTILRKFDD--KVVVQLPS 215
>UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma
gondii|Rep: Ribosomal protein L2 - Toxoplasma gondii
Length = 267
Score = 37.1 bits (82), Expect = 0.52
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +2
Query: 572 PYVRGVAMNPVEHPHGGGNHQHIGKAS 652
P +RG AMN V+HPHGGG GKAS
Sbjct: 210 PKIRGAAMNAVDHPHGGGE----GKAS 232
Score = 36.7 bits (81), Expect = 0.68
Identities = 24/68 (35%), Positives = 38/68 (55%)
Frame = +3
Query: 255 GKKATLEVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKL 434
G KA L++GN +P+ + G+ + N+E + +G L + + N +I D T VKL
Sbjct: 110 GFKAPLKIGNALPLYKILLGSFIYNIEIRYKGKGSLVK-NANHNAIILMIGDIYVT-VKL 167
Query: 435 PSGAKKVL 458
PSG K+L
Sbjct: 168 PSGEIKLL 175
>UniRef50_Q951B6 Cluster: Ribosomal protein L2; n=5;
Tetrahymena|Rep: Ribosomal protein L2 - Tetrahymena
thermophila
Length = 262
Score = 37.1 bits (82), Expect = 0.52
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +2
Query: 578 VRGVAMNPVEHPHGG 622
VRGVAMNPV+HPHGG
Sbjct: 228 VRGVAMNPVDHPHGG 242
>UniRef50_Q4P5V2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 467
Score = 36.3 bits (80), Expect = 0.90
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +2
Query: 572 PYVRGVAMNPVEHPHGGG 625
P VRGVAMN +HPHGGG
Sbjct: 400 PKVRGVAMNACDHPHGGG 417
>UniRef50_P15765 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Paramecium tetraurelia|Rep: Mitochondrial 60S
ribosomal protein L2 - Paramecium tetraurelia
Length = 259
Score = 36.3 bits (80), Expect = 0.90
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2
Query: 572 PYVRGVAMNPVEHPHGG 622
P VRGVAMNPV+HP+GG
Sbjct: 229 PRVRGVAMNPVDHPNGG 245
>UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 321
Score = 35.9 bits (79), Expect = 1.2
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 279 GNVMPVGAMPKGTIVCNLEE-KMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 437
GN P+G++ GT++ ++E D +A+G AT++ H D T VKLP
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLP 211
>UniRef50_Q5DUX7 Cluster: Hydrogenosomal 60S ribosomal protein L2;
n=1; Nyctotherus ovalis|Rep: Hydrogenosomal 60S
ribosomal protein L2 - Nyctotherus ovalis
Length = 290
Score = 35.9 bits (79), Expect = 1.2
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2
Query: 548 YKVKRNCWPYVRGVAMNPVEHPHGG 622
Y V R P VRG+ NPV+HP+GG
Sbjct: 249 YWVNRGIKPQVRGIVKNPVDHPNGG 273
>UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_288, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 315
Score = 35.5 bits (78), Expect = 1.6
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = -2
Query: 482 DHASVA*WQNLLGSRR*LYSCTLSIRIVSNHSGEVSRGTCQTTSITHFLFKIAHNGTLRH 303
+H S + W NLL R L IR+V++ + ++ + TSIT+ +F + GT
Sbjct: 68 NHCSASTWNNLLSPRWELDPAGAIIRVVADDNSSLAGCPGEDTSITNVIFNVTDLGTFGS 127
Query: 302 SSNRHHISNFKSCFLS 255
+ ++ + FL+
Sbjct: 128 RAQGQNVIGNEGGFLT 143
>UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 185
Score = 35.5 bits (78), Expect = 1.6
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -2
Query: 356 TSITHFLFKIAHNGTLRHSSNRHHISN 276
T++TH + +AHNGTL S R +I+N
Sbjct: 7 TTVTHMVLNVAHNGTLGDGSKRQYIAN 33
>UniRef50_A1ZS28 Cluster: Transcriptional regulator; n=1;
Microscilla marina ATCC 23134|Rep: Transcriptional
regulator - Microscilla marina ATCC 23134
Length = 473
Score = 35.1 bits (77), Expect = 2.1
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +2
Query: 491 CWRWTYDKPILKAGRAYHKYKVKRNCWPYV---RGVAMNPVEHPHGGGNHQHIGKASTVK 661
C W DKP L+ G + + +K+ Y+ RGV P + G G Q +G +T+
Sbjct: 131 CINWALDKPSLQYGGYFGEPALKKTLATYLFQSRGVKTQPEQIVIGSGTIQLMGLLATLF 190
Query: 662 RGTSAGRKVGLIA 700
+ + G+ V IA
Sbjct: 191 KNRAKGKGVRQIA 203
>UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE45450p
- Drosophila melanogaster (Fruit fly)
Length = 294
Score = 35.1 bits (77), Expect = 2.1
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 279 GNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 440
G+ P+GA+P GT + LE+ G L A+G F T++ ++ V+LPS
Sbjct: 161 GDAYPLGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTIL--RKFDEKVVVQLPS 212
>UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2).; n=2;
Deuterostomia|Rep: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2). - Takifugu
rubripes
Length = 255
Score = 34.7 bits (76), Expect = 2.8
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 249 LLGKKA-TLEVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVI 395
++G+ A + + G+ P+GA+P GT+V NLE + G RA+G ++
Sbjct: 119 VIGRMAVSAKEGDAYPLGALPVGTLVNNLEIQPGKGSEYIRAAGTSGVLL 168
>UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome
shotgun sequence; n=2; Eumetazoa|Rep: Chromosome 17
SCAF14762, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 259
Score = 34.3 bits (75), Expect = 3.6
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +3
Query: 249 LLGKKA-TLEVGNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVI 395
++G+ A + G+ P+GA+P GT+V NLE + G RA+G ++
Sbjct: 153 VIGRMAVSANEGDAYPLGALPVGTLVNNLEIQPGKGSEYIRAAGTSGVLL 202
>UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr12 scaffold_36, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 166
Score = 34.3 bits (75), Expect = 3.6
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2
Query: 356 TSITHFLFKIAHNGTLRHSSNRHHISN 276
T +TH + +AHNGTL S R +I+N
Sbjct: 19 TMVTHMVLNVAHNGTLGDGSKRQNIAN 45
>UniRef50_Q4MYC0 Cluster: Ribosomal protein L2, putative; n=1;
Theileria parva|Rep: Ribosomal protein L2, putative -
Theileria parva
Length = 246
Score = 34.3 bits (75), Expect = 3.6
Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 572 PYVRGVAMNPVEHPHGGGNHQ-HIGKAS 652
P VRG AMN +HPHGGG + IG+ S
Sbjct: 196 PKVRGSAMNACDHPHGGGEGKAPIGRRS 223
>UniRef50_Q25807 Cluster: Rpl2 protein; n=2; Plasmodium|Rep: Rpl2
protein - Plasmodium falciparum
Length = 245
Score = 34.3 bits (75), Expect = 3.6
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +2
Query: 548 YKVKRNCWPYVRGVAMNPVEHPHGGG 625
Y + N P VRG A N +HPHGGG
Sbjct: 194 YNIYYNIKPKVRGKAKNVCDHPHGGG 219
>UniRef50_Q1IVY0 Cluster: Putative uncharacterized protein; n=1;
Deinococcus geothermalis DSM 11300|Rep: Putative
uncharacterized protein - Deinococcus geothermalis
(strain DSM 11300)
Length = 407
Score = 33.9 bits (74), Expect = 4.8
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 4/90 (4%)
Frame = -3
Query: 553 LVLVVCPSSFQNRFVIRPPPATIPTMPLLLDG----RTFLAPDGSFTLVRLASGLCPITV 386
++ + P +Q VI+P PA +P+ P R + VRL P T
Sbjct: 79 MITPLAPGRYQVEGVIKPHPAPLPSRPAAEPAPEARRVVVTATPHVREVRLEQPR-PATP 137
Query: 385 AKFPEARARRPLSPIFSSRLHTMVPLGIAP 296
A AR PL+P+ +R VPL AP
Sbjct: 138 RVSEPAPARVPLTPVSEARATEPVPLQAAP 167
>UniRef50_A0YL57 Cluster: Putative uncharacterized protein; n=1;
Lyngbya sp. PCC 8106|Rep: Putative uncharacterized
protein - Lyngbya sp. PCC 8106
Length = 620
Score = 33.9 bits (74), Expect = 4.8
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Frame = -3
Query: 508 IRPPPATIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARARRPLSPI--FS 335
I P PAT+ + PL D + +P + ++RLA+ L P +A F + + RPL + S
Sbjct: 171 IAPQPATVTSKPLPDDPNSPSSPALTPWMIRLAAQLDPAAIAPF-SSLSERPLDGLEQVS 229
Query: 334 SRLHTM----VPLGIAPTGITF 281
R T VP+G P TF
Sbjct: 230 DRHQTTLTFNVPVGWRPVVSTF 251
>UniRef50_Q559N5 Cluster: NAD+ kinase family protein; n=2;
Dictyostelium discoideum|Rep: NAD+ kinase family protein
- Dictyostelium discoideum AX4
Length = 462
Score = 33.9 bits (74), Expect = 4.8
Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Frame = -3
Query: 637 MLMVTTTVRMLYRVHGNTTYIWPAVTFDLVLVVCPSSFQNRFVIRPPPATIPTMPLLLDG 458
+++ T T Y + + P + L+ +CPSSF ++ + P + + M + G
Sbjct: 334 LIVATATGSTAYSMSCGGPMVHPCINCILLTPICPSSFSSKPALLPDDSILKLMMISQKG 393
Query: 457 RTFLAP-DGSFTLVRLASGLCPITVAKFP 374
R+ A DG+ ++ S I +K+P
Sbjct: 394 RSISATFDGTRSIKIEQSDYIIIRKSKYP 422
>UniRef50_O60035 Cluster: Protein PDC2; n=4; Candida albicans|Rep:
Protein PDC2 - Candida albicans (Yeast)
Length = 836
Score = 33.5 bits (73), Expect = 6.4
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = -3
Query: 250 KQIGLCRXFGSNEELLPCLELVWIAEVYNSQRCTSTRVMDYILNNSLDV----SMTFSVI 83
++IG+C +N E+ +W + YNS+R S + ILN+ D+ F +I
Sbjct: 7 QKIGICLKAEANPEMTQSDLALWAMKEYNSERPPSQTTISRILNSKNDIISRKESEFELI 66
Query: 82 *RAKFRSAFPLLR 44
R K A PLLR
Sbjct: 67 RRRK--RANPLLR 77
>UniRef50_UPI00006C0AC8 Cluster: PREDICTED: similar to mas-related G
protein-coupled MRG; n=3; Catarrhini|Rep: PREDICTED:
similar to mas-related G protein-coupled MRG - Homo
sapiens
Length = 191
Score = 33.1 bits (72), Expect = 8.4
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 10/116 (8%)
Frame = +1
Query: 313 VPLCAILKRK---WVI-EVVWHVPLETSPL*LDTILMLSVQE*SYRLEPR--RFCHQATE 474
V LC ++ W++ VW P T L L T+ M+++ + L + HQA
Sbjct: 22 VALCGLVGNDVICWLLYSQVWSSPYVTYILNLATVDMVNLSCVTVILLEKILMLYHQAAL 81
Query: 475 AWSVLLLEVDV*QTYFESWKGIPQVQG---QT*LLAIC-TWCCHEPCRASSRWW*P 630
+V L V +YF G+ + ++ L A+C TWCCH P S+ W P
Sbjct: 82 QVAVFLDPV----SYFSDTVGLCLLVAMSIESFLCALCPTWCCHRPEHTSAMWCSP 133
>UniRef50_A6NSE2 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 348
Score = 33.1 bits (72), Expect = 8.4
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +3
Query: 324 CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 458
C+L+E+M +RG L R+ N+ G PD R V+LP ++++
Sbjct: 297 CDLKERMAERGILLRSCANYD---GLGPDYYRAAVRLPEENERLI 338
>UniRef50_Q0CD71 Cluster: Predicted protein; n=3;
Trichocomaceae|Rep: Predicted protein - Aspergillus
terreus (strain NIH 2624)
Length = 471
Score = 33.1 bits (72), Expect = 8.4
Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = -3
Query: 505 RPPPA---TIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPIT--VAKFPEARARRP 353
R PP T+PT PL LDGRT +G LVR+A L +T + R RP
Sbjct: 3 REPPQSQETVPTSPLDLDGRTL---EGGGQLVRIAVALAALTGQAIRINHIRGNRP 55
>UniRef50_A6R0K7 Cluster: Predicted protein; n=2;
Pezizomycotina|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 325
Score = 33.1 bits (72), Expect = 8.4
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +2
Query: 374 WKLRHCDWTQS*C*AYKSKATVWSQEGSAIKQQRHGRYCCWRWTYDK 514
W L H DWT K +WS E S I R G Y WR + ++
Sbjct: 48 WCLDHQDWTLE-----DWKRVIWSDEASVILLHRRGGYRIWRTSKER 89
>UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial
precursor; n=24; Euteleostomi|Rep: 39S ribosomal protein
L2, mitochondrial precursor - Homo sapiens (Human)
Length = 305
Score = 33.1 bits (72), Expect = 8.4
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +3
Query: 279 GNVMPVGAMPKGTIVCNLEEKMGDRGRLARASGNFATVI 395
G+ P+GA+P GT++ N+E + G + RA+G ++
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 217
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 825,759,226
Number of Sequences: 1657284
Number of extensions: 18278543
Number of successful extensions: 51292
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 48892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51244
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69143070360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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