Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120567.Seq
(799 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71; Eukaryo... 237 2e-61
UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellul... 227 2e-58
UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep: ... 149 8e-35
UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3; Archaea... 100 8e-20
UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6; Thermop... 97 5e-19
UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella... 92 2e-17
UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeb... 89 1e-16
UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17; Euryar... 88 3e-16
UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10; Archae... 85 1e-15
UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12; Archae... 85 2e-15
UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1; Encephal... 84 4e-15
UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1; ... 79 1e-13
UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3; Euka... 77 4e-13
UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1; Nanoarc... 74 4e-12
UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma j... 72 2e-11
UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus N... 70 8e-11
UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2; Crenarchaeot... 65 2e-09
UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4; Thermop... 64 5e-09
UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|R... 51 4e-05
UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8 ... 50 5e-05
UniRef50_A3LNH9 Cluster: Predicted protein; n=5; Saccharomycetac... 45 0.002
UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1; ... 45 0.003
UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;... 45 0.003
UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1; ... 44 0.003
UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep... 43 0.008
UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264, ... 43 0.010
UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;... 42 0.014
UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular org... 42 0.018
UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus C... 38 0.29
UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome. prec... 38 0.39
UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90; Bacteri... 38 0.39
UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondri... 37 0.67
UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2; Streptophyti... 36 1.2
UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10; Magnoli... 36 1.6
UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellul... 36 1.6
UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2; n... 36 1.6
UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis ... 35 2.7
UniRef50_A2R416 Cluster: Contig An14c0190, complete genome; n=1;... 35 2.7
UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellul... 35 2.7
UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1; Thraustochyt... 34 3.6
UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus ... 34 4.8
UniRef50_A1W550 Cluster: ApbE family lipoprotein precursor; n=1;... 33 6.3
UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1; ... 33 6.3
UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria tene... 33 8.3
UniRef50_Q21305 Cluster: Sox (Mammalian sry box) family protein ... 33 8.3
UniRef50_Q0CD71 Cluster: Predicted protein; n=3; Trichocomaceae|... 33 8.3
>UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71;
Eukaryota|Rep: 60S ribosomal protein L8 - Drosophila
melanogaster (Fruit fly)
Length = 256
Score = 237 bits (580), Expect = 2e-61
Identities = 117/171 (68%), Positives = 130/171 (76%), Gaps = 1/171 (0%)
Frame = +2
Query: 254 LDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEALHR-PICLLW 430
LD+AER GYI+GVVKDIIHDPGRGAPLAVVHFRDPY++K RKELFIAPE +H
Sbjct: 32 LDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFRDPYRYKIRKELFIAPEGMHTGQFVYCG 91
Query: 431 KESNS*SWKCDACWSYA*GYHCVQS*EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 610
+++ G EK GDRGRLAR SGN+ATVI HN D K+TRVKLP
Sbjct: 92 RKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQDTKKTRVKLP 151
Query: 611 SGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVQRNCWPYVRGV 763
SGAKKV+PS+NR MVGIVAGGGRIDKPILKAGRAYHKYKV+RN WP VRGV
Sbjct: 152 SGAKKVVPSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRGV 202
Score = 102 bits (245), Expect = 9e-21
Identities = 62/125 (49%), Positives = 76/125 (60%), Gaps = 7/125 (5%)
Frame = +3
Query: 162 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRS*ITLNVMDTSRELLRI*------SMTLVE 323
MGRVIRAQRKGAGSVF +H KKRKGA KLRS R +++ L
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60
Query: 324 VHLWLLYTSAIHTSSRQGRSSSLLPK-LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVC 500
VH Y I + + P+ ++TGQFVYCG+KATL++GNVMP+ MPEGTI+C
Sbjct: 61 VHFRDPYRYKIR------KELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIIC 114
Query: 501 NLERK 515
NLE K
Sbjct: 115 NLEEK 119
Score = 33.1 bits (72), Expect = 8.3
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +1
Query: 763 AMNPVEHPHGGG 798
AMNPVEHPHGGG
Sbjct: 203 AMNPVEHPHGGG 214
>UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellular
organisms|Rep: 60S ribosomal protein L8 - Homo sapiens
(Human)
Length = 257
Score = 227 bits (556), Expect = 2e-58
Identities = 111/171 (64%), Positives = 129/171 (75%), Gaps = 1/171 (0%)
Frame = +2
Query: 254 LDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEALHR-PICLLW 430
+D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA E +H
Sbjct: 32 VDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCG 91
Query: 431 KESNS*SWKCDACWSYA*GYHCVQS*EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 610
K++ + G EK GDRG+LARASGN+ATVI HNP+ K+TRVKLP
Sbjct: 92 KKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLP 151
Query: 611 SGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVQRNCWPYVRGV 763
SG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK +RNCWP VRGV
Sbjct: 152 SGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGV 202
Score = 92.7 bits (220), Expect = 1e-17
Identities = 54/122 (44%), Positives = 71/122 (58%), Gaps = 4/122 (3%)
Frame = +3
Query: 162 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRS*ITLNVMDTSRELLRI*SMTLVEVHLWLL 341
MGRVIR QRKGAGSVF +H K RKGA +LR+ ++ + + I + +
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRA---VDFAERHGYIKGIVKDIIHDPGRGAP 57
Query: 342 YTSAIHTSSRQGRSSSLL----PKLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 509
+ + + + L ++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LE
Sbjct: 58 LAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLE 117
Query: 510 RK 515
K
Sbjct: 118 EK 119
>UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep:
Ribosomal protein - Codakia orbicularis
Length = 234
Score = 149 bits (361), Expect = 8e-35
Identities = 65/80 (81%), Positives = 75/80 (93%)
Frame = +2
Query: 524 RGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKA 703
RG+LARASGN+ATVI HNPD K++RVKLPSG+KKV+PS+NR +VGIVAGGGRIDKP+LKA
Sbjct: 99 RGKLARASGNYATVISHNPDTKKSRVKLPSGSKKVIPSANRAIVGIVAGGGRIDKPMLKA 158
Query: 704 GRAYHKYKVQRNCWPYVRGV 763
GRAYHKYK +RNCWP VRGV
Sbjct: 159 GRAYHKYKAKRNCWPKVRGV 178
Score = 55.2 bits (127), Expect = 2e-06
Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Frame = +3
Query: 162 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRS*ITLN----VMDTSRELLRI--*SMTLVE 323
MGRVIR+QRKG GSVF +HTK RKG LR+ V ++++ L +
Sbjct: 1 MGRVIRSQRKGPGSVFKAHTKHRKGKAALRAVDFAERHGYVKGVVKDIVHDPGRGAPLAK 60
Query: 324 VHLWLLYTSAIHTSSRQGRSSSLLPKLYTGQFVYCGKKATLEV 452
V Y + T + +YTGQF+YCGKKA L++
Sbjct: 61 VTFRDPYKYKMRTETFIATEG-----MYTGQFIYCGKKANLQI 98
Score = 33.1 bits (72), Expect = 8.3
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +1
Query: 763 AMNPVEHPHGGG 798
AMNPVEHPHGGG
Sbjct: 179 AMNPVEHPHGGG 190
>UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3;
Archaea|Rep: 50S ribosomal protein L2P - Aeropyrum
pernix
Length = 238
Score = 99.5 bits (237), Expect = 8e-20
Identities = 62/162 (38%), Positives = 89/162 (54%), Gaps = 1/162 (0%)
Frame = +2
Query: 281 IKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEALH-RPICLLWKESNS*SWK 457
++G V ++IHDPGR PLA V D +F L A E ++ I + + +
Sbjct: 38 LRGKVVELIHDPGRYVPLARVVREDGVEF-----LMPAAEGMYVGQIIEIGPAAKPEAGN 92
Query: 458 CDACWSYA*GYHCVQS*EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPS 637
G + GD G+LAR +G++A V+G +T ++LPSG K +P+
Sbjct: 93 ILPLGKIPEGTEVFNVELRPGDGGKLARQAGSYALVVGRA--GAKTILRLPSGKDKEVPN 150
Query: 638 SNRGMVGIVAGGGRIDKPILKAGRAYHKYKVQRNCWPYVRGV 763
+R +GI AG GRI+KPI+KAG AYHK+KV+ WP VRGV
Sbjct: 151 DSRATIGIPAGAGRIEKPIMKAGFAYHKWKVKARKWPRVRGV 192
Score = 41.9 bits (94), Expect = 0.018
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 402 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 509
+Y GQ + G A E GN++P+G +PEGT V N+E
Sbjct: 74 MYVGQIIEIGPAAKPEAGNILPLGKIPEGTEVFNVE 109
>UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6;
Thermoproteales|Rep: 50S ribosomal protein L2P -
Pyrobaculum aerophilum
Length = 246
Score = 97.1 bits (231), Expect = 5e-19
Identities = 58/160 (36%), Positives = 85/160 (53%), Gaps = 1/160 (0%)
Frame = +2
Query: 284 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEALH-RPICLLWKESNS*SWKC 460
KG V DI+H+PG AP+A + + +F A E L+ + + K ++ +
Sbjct: 39 KGYVVDILHEPGLNAPVAKIVTENGVEFFN-----YAAEGLYVGQVVEIGKGASPKTGNI 93
Query: 461 DACWSYA*GYHCVQS*EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSS 640
G ++ GD G+ ARA G +A VIG P+ +T ++LPSG + S
Sbjct: 94 MILGEIPEGTMIFNVEKRAGDGGKFARAGGTYAVVIGQKPEENKTIIRLPSGRTVEVDSR 153
Query: 641 NRGMVGIVAGGGRIDKPILKAGRAYHKYKVQRNCWPYVRG 760
R VGIVAGGGRI+KP LKAG+ YH+ + + +P VRG
Sbjct: 154 GRATVGIVAGGGRIEKPFLKAGKKYHRARAKAWKYPTVRG 193
Score = 44.0 bits (99), Expect = 0.004
Identities = 18/38 (47%), Positives = 28/38 (73%)
Frame = +3
Query: 402 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLERK 515
LY GQ V GK A+ + GN+M +G +PEGT++ N+E++
Sbjct: 74 LYVGQVVEIGKGASPKTGNIMILGEIPEGTMIFNVEKR 111
>UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella
natans|Rep: Ribosomal protein L8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 281
Score = 91.9 bits (218), Expect = 2e-17
Identities = 54/165 (32%), Positives = 85/165 (51%), Gaps = 1/165 (0%)
Frame = +2
Query: 266 ERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEALH-RPICLLWKESN 442
E++ IKG++ D + P + F FK EL+IA E L+ ++
Sbjct: 62 EKYSVIKGIISKFHIDTVKKVPAIKIKFNVTKYFKNYYELYIAVEKLYLNKTIACGLQAR 121
Query: 443 S*SWKCDACWSYA*GYHCVQS*EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 622
+ ++ G EK GD G+LAR++G F V+ H+ T++KLPS
Sbjct: 122 PITGNVLPLFNIPNGVFVCNVEEKEGDGGKLARSAGAFVGVLSHSKYNNVTKLKLPSKKI 181
Query: 623 KVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVQRNCWPYVR 757
K+L S R +G+VAGGG+ +KP+LKAG+ Y+K+K +P V+
Sbjct: 182 KILSSFCRATIGVVAGGGKYEKPLLKAGKNYYKFKSLNKKYPIVK 226
>UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L8 - Entamoeba
histolytica
Length = 158
Score = 89.0 bits (211), Expect = 1e-16
Identities = 52/114 (45%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Frame = +2
Query: 284 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEALHR-PICLLWKESNS*SWKC 460
+G+VK I HDPGRGAPLA V FR+P ++ KELFI E L+ +++
Sbjct: 33 RGLVKSIEHDPGRGAPLARVVFRNPRQYGLDKELFICAEGLYSGQYIYCGSKASLHIGNV 92
Query: 461 DACWSYA*GYHCVQS*EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 622
G K GDRG +ARASGN+ATVI HN D + TR++LPSGAK
Sbjct: 93 LPIGQCPEGTVVCNVESKPGDRGIIARASGNYATVISHNADNETTRIRLPSGAK 146
Score = 66.5 bits (155), Expect = 7e-10
Identities = 24/38 (63%), Positives = 33/38 (86%)
Frame = +3
Query: 402 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLERK 515
LY+GQ++YCG KA+L +GNV+P+G PEGT+VCN+E K
Sbjct: 73 LYSGQYIYCGSKASLHIGNVLPIGQCPEGTVVCNVESK 110
>UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17;
Euryarchaeota|Rep: 50S ribosomal protein L2P -
Methanopyrus kandleri
Length = 243
Score = 87.8 bits (208), Expect = 3e-16
Identities = 56/170 (32%), Positives = 82/170 (48%), Gaps = 1/170 (0%)
Frame = +2
Query: 257 DYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEALH-RPICLLWK 433
D E+ G + G V +++HDP R AP+A V F D + L + PE I
Sbjct: 34 DEQEKKGKVVGKVVELLHDPARNAPVARVRFEDG-----EERLILVPEGTKVGDIIECGV 88
Query: 434 ESNS*SWKCDACWSYA*GYHCVQS*EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 613
+ G + GD G+ ARA G +AT+I H D RT V+LPS
Sbjct: 89 SAEIKPGNTLPLAEIPEGVPIFNIEGQPGDGGKFARAPGCYATIIAH--DVGRTYVQLPS 146
Query: 614 GAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVQRNCWPYVRGV 763
G + R +G+++GGG+ +KP +KAG+ Y+ + + WP VRGV
Sbjct: 147 GKVRTFDPRCRATIGVMSGGGKREKPFVKAGKKYYHMRSKGGKWPKVRGV 196
Score = 34.3 bits (75), Expect = 3.6
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 411 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 509
G + CG A ++ GN +P+ +PEG + N+E
Sbjct: 81 GDIIECGVSAEIKPGNTLPLAEIPEGVPIFNIE 113
>UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10;
Archaea|Rep: 50S ribosomal protein L2P - Sulfolobus
tokodaii
Length = 238
Score = 85.4 bits (202), Expect = 1e-15
Identities = 56/159 (35%), Positives = 82/159 (51%)
Frame = +2
Query: 287 GVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEALHRPICLLWKESNS*SWKCDA 466
G V DI+H+PG APLA++ D KF + + + I + K + +
Sbjct: 39 GKVIDIVHNPGTNAPLALIKLDDGTKFYVPS---VQGLVVGQKI-QIGKNAAISNGNIVE 94
Query: 467 CWSYA*GYHCVQS*EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNR 646
+ G + GD G+ AR++G + V+G D + VKL S + S+ R
Sbjct: 95 VGNVPEGTIISNIEKTRGDGGKFARSAGTYGVVVGKTGD--KVLVKLSSEKIAQVSSNAR 152
Query: 647 GMVGIVAGGGRIDKPILKAGRAYHKYKVQRNCWPYVRGV 763
+VG+VAGGG +KP+LKAG Y KYKV+ WP+VRGV
Sbjct: 153 AIVGVVAGGGVTEKPLLKAGNNYWKYKVKAKKWPHVRGV 191
Score = 41.9 bits (94), Expect = 0.018
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +3
Query: 402 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLER 512
L GQ + GK A + GN++ VG +PEGTI+ N+E+
Sbjct: 73 LVVGQKIQIGKNAAISNGNIVEVGNVPEGTIISNIEK 109
>UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12;
Archaea|Rep: 50S ribosomal protein L2P - Methanosarcina
acetivorans
Length = 238
Score = 85.0 bits (201), Expect = 2e-15
Identities = 60/168 (35%), Positives = 85/168 (50%), Gaps = 2/168 (1%)
Frame = +2
Query: 266 ERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFI-APEALH-RPICLLWKES 439
+ + ++G V I HDP R AP+A V F+ +ELF+ A E + I ++
Sbjct: 34 DENSSLRGEVVGIEHDPARSAPIAKV------AFENGEELFLLASEGIAVGNIIECGDDA 87
Query: 440 NS*SWKCDACWSYA*GYHCVQS*EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGA 619
+ G+ K D G+ R+SG +ATV+ H +A RT V +PSG
Sbjct: 88 EVKPGNIVPIGNVPEGFFICNVESKPNDGGKFVRSSGVYATVVTH--EATRTAVSMPSGN 145
Query: 620 KKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVQRNCWPYVRGV 763
K L R +VGIVAG GR+D+P LKAG+ YHK K + +P V V
Sbjct: 146 IKWLNPKCRAVVGIVAGSGRVDRPWLKAGKKYHKMKTRAAKYPRVSAV 193
Score = 43.6 bits (98), Expect = 0.006
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +3
Query: 411 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLERK 515
G + CG A ++ GN++P+G +PEG +CN+E K
Sbjct: 78 GNIIECGDDAEVKPGNIVPIGNVPEGFFICNVESK 112
>UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L8 -
Encephalitozoon cuniculi
Length = 239
Score = 83.8 bits (198), Expect = 4e-15
Identities = 53/161 (32%), Positives = 85/161 (52%), Gaps = 1/161 (0%)
Frame = +2
Query: 284 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEALHRPICLLWKESNS*SWKCD 463
+G V DI+H+ RGAP+A++ F++ E + + L+ ++
Sbjct: 34 EGEVIDIVHERSRGAPVAIISFKEDDCMVPASEGMYTGQKI-----LIGDDAPIDIGNIT 88
Query: 464 ACWSYA*GYHCVQS*EKM-GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSS 640
+ G V S E + GD G A +G+++ V+ H + T +K+PSG K + S
Sbjct: 89 KIKNVPEGM-AVNSVESVYGDGGTFAMVNGSYSLVVNHRKETNETVIKIPSGKKLTVSSE 147
Query: 641 NRGMVGIVAGGGRIDKPILKAGRAYHKYKVQRNCWPYVRGV 763
R +VG+VAGGG DKP+LKA A++K K + + +P VRGV
Sbjct: 148 CRCIVGVVAGGGIHDKPLLKASVAHYKAKARGHVFPRVRGV 188
Score = 33.9 bits (74), Expect = 4.8
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +3
Query: 402 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 509
+YTGQ + G A +++GN+ + +PEG V ++E
Sbjct: 68 MYTGQKILIGDDAPIDIGNITKIKNVPEGMAVNSVE 103
>UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L2P - Ignicoccus hospitalis KIN4/I
Length = 251
Score = 79.4 bits (187), Expect = 1e-13
Identities = 37/82 (45%), Positives = 55/82 (67%)
Frame = +2
Query: 518 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 697
GD G+LAR+ G +A ++G + ++ ++LPSG K + + R +GI AG GR +KP+L
Sbjct: 117 GDGGKLARSGGAYAILVGKSGNS--AIIQLPSGKVKQVNAKARATIGIAAGAGRDEKPLL 174
Query: 698 KAGRAYHKYKVQRNCWPYVRGV 763
KAG AY+K+K + WP VRGV
Sbjct: 175 KAGNAYYKWKAKAKKWPVVRGV 196
Score = 38.3 bits (85), Expect = 0.22
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 402 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 509
+YTGQ V G A GN++P+ A+PEGT + N+E
Sbjct: 78 MYTGQKVQIGPNAAPVNGNILPLYAIPEGTQIFNVE 113
>UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3;
Eukaryota|Rep: 60S ribosomal protein KD4/L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 123
Score = 77.4 bits (182), Expect = 4e-13
Identities = 33/49 (67%), Positives = 41/49 (83%)
Frame = +2
Query: 254 LDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPE 400
LD+ ER+GY+KGVV +IIHDPGRGAPLA V FR P++FK +KELF+ E
Sbjct: 32 LDFGERNGYLKGVVTEIIHDPGRGAPLARVTFRHPFRFKKQKELFVXXE 80
Score = 60.9 bits (141), Expect = 4e-08
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Frame = +3
Query: 162 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRS*ITLNVMDTSRELLRI*SMTLVEVHLW-- 335
MGRVIRAQRK AGSVF SHT RKG K RS L+ + + L + + + +
Sbjct: 1 MGRVIRAQRKVAGSVFKSHTHHRKGPAKFRS---LDFGERNGYLKGVVTEIIHDPGRGAP 57
Query: 336 LLYTSAIHT-SSRQGRSSSLLPKLYTG-QFVYCGKKATLEVGNVMPVGAMPEG 488
L + H ++ + + ++ T +YCGKKATL VGNV+P+ ++PEG
Sbjct: 58 LARVTFRHPFRFKKQKELFVXXEVCTPVSSLYCGKKATLVVGNVLPLRSIPEG 110
>UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L2P -
Nanoarchaeum equitans
Length = 238
Score = 74.1 bits (174), Expect = 4e-12
Identities = 36/82 (43%), Positives = 52/82 (63%)
Frame = +2
Query: 518 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 697
GD G+L RASG+FA ++ D + V+LPSG K L ++ R ++G++AGGGR +KP +
Sbjct: 114 GDGGKLVRASGDFALLVQKLGD--KVIVQLPSGQFKTLSANARAVIGVIAGGGRKEKPFV 171
Query: 698 KAGRAYHKYKVQRNCWPYVRGV 763
KAG Y+ + WP V GV
Sbjct: 172 KAGNKYYWASSRNRHWPVVNGV 193
Score = 34.7 bits (76), Expect = 2.7
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +3
Query: 381 SSSLLPK---LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 509
+ SLLP + G VY GK+A +G++ P+ +PEGT + LE
Sbjct: 65 AQSLLPAPLGISVGDTVYYGKEAPNAIGSIKPLSEIPEGTKIYMLE 110
>UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07017 protein - Schistosoma
japonicum (Blood fluke)
Length = 112
Score = 71.7 bits (168), Expect = 2e-11
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +2
Query: 254 LDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRK 379
+D+AERHGYI+GVVK+IIHDPGRGAPLA V FRD Y +K K
Sbjct: 28 VDFAERHGYIRGVVKEIIHDPGRGAPLAKVAFRDVYSYKLIK 69
Score = 43.2 bits (97), Expect = 0.008
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +3
Query: 174 IRAQRKGAGSVFVSHTKKRKGAPKLR 251
IR+QRKGAG VF +HTK RKGA +LR
Sbjct: 1 IRSQRKGAGGVFKAHTKHRKGAARLR 26
>UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L2
- Candidatus Nitrosopumilus maritimus SCM1
Length = 244
Score = 69.7 bits (163), Expect = 8e-11
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 1/161 (0%)
Frame = +2
Query: 284 KGVVKDIIHDPGRGAPLAVVHFRD-PYKFKTRKELFIAPEALHRPICLLWKESNS*SWKC 460
+G + D++H+ GR APLA V F D F E L + ++ N S +
Sbjct: 41 EGEIIDLVHERGREAPLAKVRFEDGSVSFVPAVLGAKVGETLQFGLKSKIEKGNVISIQ- 99
Query: 461 DACWSYA*GYHCVQS*EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSS 640
+ G + GD G + +++G ATV H + VKLPSG L
Sbjct: 100 ----NIPDGTIVCNIEKHFGDGGAIVKSAGTDATVFSHGDEG--VTVKLPSGKFTTLNPK 153
Query: 641 NRGMVGIVAGGGRIDKPILKAGRAYHKYKVQRNCWPYVRGV 763
NR M+G +AGGG ++P + AG + +K + +P VRGV
Sbjct: 154 NRAMIGTLAGGGASERPFMSAGGKWRNFKAKGKKYPIVRGV 194
Score = 38.7 bits (86), Expect = 0.17
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +3
Query: 411 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLER 512
G+ + G K+ +E GNV+ + +P+GTIVCN+E+
Sbjct: 79 GETLQFGLKSKIEKGNVISIQNIPDGTIVCNIEK 112
>UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2;
Crenarchaeota|Rep: Ribosomal protein L2 - Cenarchaeum
symbiosum
Length = 243
Score = 64.9 bits (151), Expect = 2e-09
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 1/161 (0%)
Frame = +2
Query: 284 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFI-APEALHRPICLLWKESNS*SWKC 460
+G V D++H+ GR APLA + F D L +++ + ++ N S +
Sbjct: 40 EGTVIDLVHERGRDAPLAKIRFEDGIVSYVPAVLGTRVGSSMNFGLKSEIRDGNVISVQ- 98
Query: 461 DACWSYA*GYHCVQS*EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSS 640
+ G + GD G + +++G ATV H +KLPSG L
Sbjct: 99 ----NIPDGTTVCNVEKHYGDGGAIVKSAGGNATVFSHGEGG--VVLKLPSGRFSTLNPK 152
Query: 641 NRGMVGIVAGGGRIDKPILKAGRAYHKYKVQRNCWPYVRGV 763
NR MVG +AGGG ++P + AG + +++ + +P VRGV
Sbjct: 153 NRAMVGTLAGGGVSERPFMSAGGKWRRFRSKGRKYPIVRGV 193
Score = 33.5 bits (73), Expect = 6.3
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 411 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLERKW 518
G + G K+ + GNV+ V +P+GT VCN+E+ +
Sbjct: 78 GSSMNFGLKSEIRDGNVISVQNIPDGTTVCNVEKHY 113
>UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L2P -
Thermoplasma volcanium
Length = 234
Score = 63.7 bits (148), Expect = 5e-09
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 1/159 (0%)
Frame = +2
Query: 290 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEALHRPICLLWKESNS*SWKCDAC 469
VVKDIIH PGR +PL + D K + F + + N + A
Sbjct: 37 VVKDIIHAPGRNSPL--LELVDSTGKKVYQIAFTGAYVGQKIVAGNVDTINPGTTTVLA- 93
Query: 470 WSYA*GYHCVQS*EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRG 649
+ G + GD G R++G FA V+ H R +KLPSG+ + R
Sbjct: 94 -NIPDGSYVYNIESSPGDGGEFCRSAGTFALVVSHG---SRVTLKLPSGSMRDFDPRCRA 149
Query: 650 MVGIVAGGGRIDKPILKAGRAYHKYKVQRNCWPY-VRGV 763
VG+VA G ID PILKAG H Y + PY VRGV
Sbjct: 150 TVGVVAASGIIDAPILKAGTHVH-YLRSKAKRPYTVRGV 187
>UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|Rep:
Ribosomal protein L8 - Sus scrofa (Pig)
Length = 106
Score = 50.8 bits (116), Expect = 4e-05
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = -1
Query: 763 HTTYIWPAVTLDLVLVVCPSSFQNRFVNTSTSSNNTDHASVA*WQNLL 620
HT + WPA+ L L+LV+ + QN VN +TSS++TDH+ V +LL
Sbjct: 57 HTPHAWPAIPLGLILVIGTAGLQNGLVNAATSSHHTDHSPVGRGDDLL 104
>UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8
protein - Rattus norvegicus (Rat)
Length = 47
Score = 50.4 bits (115), Expect = 5e-05
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +3
Query: 162 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRS 254
MGRVIR QRKGAGSVF +H K RKGA +LR+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRA 31
Score = 33.1 bits (72), Expect = 8.3
Identities = 12/15 (80%), Positives = 15/15 (100%)
Frame = +2
Query: 254 LDYAERHGYIKGVVK 298
+D+AERHGYIKG+VK
Sbjct: 32 VDFAERHGYIKGIVK 46
>UniRef50_A3LNH9 Cluster: Predicted protein; n=5;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 27/82 (32%), Positives = 44/82 (53%)
Frame = +2
Query: 518 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 697
G RG+L +A+G FA ++ +P+ K+ +KL SG + + + +G+V+
Sbjct: 237 GGRGQLVKAAGTFARLLSKHPEEKKVVIKLSSGEHRYVHMNCHATLGVVSNKEHQAISWG 296
Query: 698 KAGRAYHKYKVQRNCWPYVRGV 763
KAGR+ H+ K P VRGV
Sbjct: 297 KAGRSRHRGK-----RPMVRGV 313
>UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 128
Score = 44.8 bits (101), Expect = 0.003
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +3
Query: 402 LYTGQFVYCGKKATLEVGNVMPVGAMPEG 488
+YTGQFV C KKATL V NV+P+ + PEG
Sbjct: 48 IYTGQFVCCSKKATLIVDNVLPLRSTPEG 76
>UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;
n=24; Spermatophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Oryza sativa subsp. japonica (Rice)
Length = 502
Score = 44.8 bits (101), Expect = 0.003
Identities = 29/82 (35%), Positives = 47/82 (57%)
Frame = +2
Query: 518 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 697
G +LARA+G +A +I A + V+LPSG +K++ S R +GIV+ + +
Sbjct: 383 GQGAKLARAAGTYAKII--KEPASQCLVRLPSGVEKLIDSRCRATIGIVSNPNHGARKLR 440
Query: 698 KAGRAYHKYKVQRNCWPYVRGV 763
KAG++ ++ +R P VRGV
Sbjct: 441 KAGQS--RWSGRR---PIVRGV 457
>UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 719
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Frame = -1
Query: 706 SSFQNRFVNTSTSSNNTDHASVA*WQNLLGSRR*LYSCTLSIRIVS--NHSGEVSR 545
+S Q+ V+T+T+SNNT++ SV WQN L +RR L + T +R+ S N +V R
Sbjct: 30 TSLQDWLVDTTTASNNTNYGSVGRWQNFLDTRRQLVTGTHVLRLASCQNDQSQVVR 85
>UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep:
Ribosomal protein L2 - Zea mays (Maize)
Length = 448
Score = 43.2 bits (97), Expect = 0.008
Identities = 30/82 (36%), Positives = 44/82 (53%)
Frame = +2
Query: 518 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 697
G G++ RA+G +A V+ P AK ++LPSGA+K + S +GIV+ + +
Sbjct: 319 GQGGKMVRAAGTYAKVV-QEPGAKCV-LRLPSGAEKAVDSRCHATIGIVSNPSHGTRKLR 376
Query: 698 KAGRAYHKYKVQRNCWPYVRGV 763
KAG H + R P VRGV
Sbjct: 377 KAG---HSRWLGRR--PVVRGV 393
>UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_3264, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 66
Score = 42.7 bits (96), Expect = 0.010
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +3
Query: 162 MGRVIRAQRKGAGSVFVSHTKKRK 233
MGRVIRAQRKG GS+F SHT RK
Sbjct: 1 MGRVIRAQRKGVGSIFKSHTHHRK 24
>UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;
n=2; Embryophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Marchantia polymorpha (Liverwort)
Length = 501
Score = 42.3 bits (95), Expect = 0.014
Identities = 28/82 (34%), Positives = 44/82 (53%)
Frame = +2
Query: 518 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 697
G +L RA+G FA +I + + V+LPSG K++ S R +GIV+ +
Sbjct: 382 GQGAKLTRAAGTFAQIIQKVENTPQCIVRLPSGVDKLIDSRCRATIGIVSNLNHGKRKFN 441
Query: 698 KAGRAYHKYKVQRNCWPYVRGV 763
KAG++ ++ +R P VRGV
Sbjct: 442 KAGQS--RWLGRR---PIVRGV 458
>UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular
organisms|Rep: Ribosomal protein L2 - Physcomitrella
patens (Moss)
Length = 463
Score = 41.9 bits (94), Expect = 0.018
Identities = 29/82 (35%), Positives = 45/82 (54%)
Frame = +2
Query: 518 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 697
G +L RA+G FA +I + + V+LPSG K++ S R VGIV+ + +
Sbjct: 344 GQGAKLIRAAGTFAQIIKKFENTPQCIVRLPSGVDKLIDSRCRATVGIVSNLHHGKRKLD 403
Query: 698 KAGRAYHKYKVQRNCWPYVRGV 763
KAG++ ++ +R P VRGV
Sbjct: 404 KAGQS--RWLGRR---PIVRGV 420
>UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus
Carsonella ruddii|Rep: Ribosomal protein L2 - Carsonella
ruddii
Length = 235
Score = 37.9 bits (84), Expect = 0.29
Identities = 46/174 (26%), Positives = 85/174 (48%), Gaps = 3/174 (1%)
Frame = +2
Query: 251 LLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRD---PYKFKTRKELFIAPEALHRPIC 421
++D+ I G+V+ I +DP R A +A++ + D Y KT EL ++ + +
Sbjct: 38 IIDFKRNKYNILGIVESIHYDPNRNAKIALIKYLDGDKKYIIKT-NELEVSDKIISSLNN 96
Query: 422 LLWKESNS*SWKCDACWSYA*GYHCVQS*EKMGDRGRLARASGNFATVIGHNPDAKRTRV 601
++ K NS K + +C +S K +G +R++G+ + +I N + +
Sbjct: 97 VILKPGNSTIIKNINVGTL---INCFESIPK--TKGIFSRSAGSESEIIFKNNNF--GII 149
Query: 602 KLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVQRNCWPYVRGV 763
KL SG KK + + +G + ++K + KAG+ +++K R P VRGV
Sbjct: 150 KLSSGIKKKISINCMATIGKIC-TFNLNKKLYKAGQ--NRWKGIR---PTVRGV 197
>UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome.
precursor; n=9; Pezizomycotina|Rep: Contig An01c0260,
complete genome. precursor - Aspergillus niger
Length = 414
Score = 37.5 bits (83), Expect = 0.39
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = +2
Query: 518 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 697
G G+L R++G FATVI ++ ++L SG +++ VG+ + + +
Sbjct: 235 GQGGQLCRSAGTFATVIAKERISQHVTIRLQSGEVRLIHKDCCATVGVASNPNHQYRQLG 294
Query: 698 KAGRA 712
KAGR+
Sbjct: 295 KAGRS 299
>UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90;
Bacteria|Rep: 50S ribosomal protein L2 - Lactobacillus
plantarum
Length = 279
Score = 37.5 bits (83), Expect = 0.39
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +3
Query: 378 RSSSLLPK-LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLERK 515
+S L PK L G V G +A ++VGN +P+ +P GT++ N+E K
Sbjct: 101 KSYILAPKGLEVGMQVQSGAEADIKVGNALPLTNIPVGTVIHNIELK 147
>UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondrial
precursor; n=6; Ascomycota|Rep: 54S ribosomal protein
RML2, mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 393
Score = 36.7 bits (81), Expect = 0.67
Identities = 17/62 (27%), Positives = 34/62 (54%)
Frame = +2
Query: 527 GRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAG 706
G+ R++G +A V+ P+ K+ V+L SG + + +G+V+ ++ + KAG
Sbjct: 263 GKFCRSAGTYARVLAKLPEKKKAIVRLQSGEHRYVSLEAVATIGVVSNIDHQNRSLGKAG 322
Query: 707 RA 712
R+
Sbjct: 323 RS 324
>UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2;
Streptophytina|Rep: Ribosomal protein L2 - Chara
vulgaris (Common stonewort)
Length = 262
Score = 35.9 bits (79), Expect = 1.2
Identities = 27/82 (32%), Positives = 42/82 (51%)
Frame = +2
Query: 518 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 697
G + RA+G FA +I + R++LPSGA + S R +GIV+ +
Sbjct: 145 GQGAKFVRAAGTFAQLIQKHEAT--VRLRLPSGALASINSQCRATIGIVSNENHGKRNFR 202
Query: 698 KAGRAYHKYKVQRNCWPYVRGV 763
KAG++ ++ +R P VRGV
Sbjct: 203 KAGQS--RWLGRR---PVVRGV 219
>UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10;
Magnoliophyta|Rep: 50S ribosomal protein L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 144
Score = 35.5 bits (78), Expect = 1.6
Identities = 29/83 (34%), Positives = 42/83 (50%)
Frame = +2
Query: 515 MGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPI 694
+G G+LARA+G A +I + K +KLPSG +++ + VG V G K +
Sbjct: 16 LGRGGQLARAAGAVAKLIAK--EGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSL 73
Query: 695 LKAGRAYHKYKVQRNCWPYVRGV 763
GRA K + + P VRGV
Sbjct: 74 ---GRAGSKCWLGKR--PVVRGV 91
>UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellular
organisms|Rep: 50S ribosomal protein L2 - Brucella
melitensis
Length = 277
Score = 35.5 bits (78), Expect = 1.6
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 399 KLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 509
+L G V G ++ GN MP+ +MP GTI+ N+E
Sbjct: 109 RLAVGDQVVAGNSVDVKPGNAMPLSSMPVGTIIHNVE 145
>UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2;
n=423; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 274
Score = 35.5 bits (78), Expect = 1.6
Identities = 29/83 (34%), Positives = 42/83 (50%)
Frame = +2
Query: 515 MGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPI 694
+G G+LARA+G A +I + K +KLPSG +++ + VG V G K +
Sbjct: 146 LGRGGQLARAAGAVAKLIAK--EGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSL 203
Query: 695 LKAGRAYHKYKVQRNCWPYVRGV 763
GRA K + + P VRGV
Sbjct: 204 ---GRAGSKCWLGKR--PVVRGV 221
>UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 169
Score = 34.7 bits (76), Expect = 2.7
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +2
Query: 518 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 697
G ++ RA+G A ++ P + +KLPSG K + + R +G V+ K +
Sbjct: 37 GQGAKMVRAAGTNAKIL-KEPAKGKCLIKLPSGDTKWINAKCRATIGTVSNPSHGTKKLY 95
Query: 698 KAGRA 712
KAG++
Sbjct: 96 KAGQS 100
>UniRef50_A2R416 Cluster: Contig An14c0190, complete genome; n=1;
Aspergillus niger|Rep: Contig An14c0190, complete genome
- Aspergillus niger
Length = 759
Score = 34.7 bits (76), Expect = 2.7
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = -2
Query: 600 TLVRLASGLCPITVAKFPEARARRPLSPIFSQDCTQWYPQA*LQQASHFQLQELLSFHN 424
T+ L+S L +TV P R P++ + QDC P + +Q+ASH Q ++ +
Sbjct: 152 TVYSLSSDLTSVTVCHDPSKRTSMPIA-LVDQDCLHHNPYSDIQEASHSTAQSSVNLED 209
>UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellular
organisms|Rep: 50S ribosomal protein L2 - Aquifex
aeolicus
Length = 304
Score = 34.7 bits (76), Expect = 2.7
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +2
Query: 518 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 697
G G++ARA+G +A V+G + V++PSG +++ VG V G + ++
Sbjct: 174 GKGGQIARAAGTWAQVLGRSTRKGYVLVRMPSGEVRMIHERCMATVGRV---GLAEHELV 230
Query: 698 KAGRA 712
K G+A
Sbjct: 231 KLGKA 235
>UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1;
Thraustochytrium aureum|Rep: Ribosomal protein L2 -
Thraustochytrium aureum
Length = 236
Score = 34.3 bits (75), Expect = 3.6
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 3/173 (1%)
Frame = +2
Query: 254 LDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEALHRPICLL-- 427
+D+ + + V + +DP R + +VH + + F+ R + +AP+ + I L
Sbjct: 38 IDFFRKPSHNSFKVLNFFYDPNRSCKVIIVH--NVHTFQPR--IVLAPKGAFQGINLFDF 93
Query: 428 WKESNS*SWKCDACW-SYA*GYHCVQS*EKMGDRGRLARASGNFATVIGHNPDAKRTRVK 604
KE+ S S C + + G + + R++G+ V+ D T VK
Sbjct: 94 TKENPSNSIGCSQFFHNINVGSYVYSIQSTPNSKMTFIRSAGSQGQVV--KKDHYFTFVK 151
Query: 605 LPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVQRNCWPYVRGV 763
+PS K S+ R +G V ++KAG + RN P VRGV
Sbjct: 152 IPSSEVKKFSSNCRACLGQVGNESHFLSSLMKAGESR-----WRNKRPKVRGV 199
>UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein L2 - Chlorokybus
atmophyticus (Soil alga)
Length = 368
Score = 33.9 bits (74), Expect = 4.8
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 348 SAIHTSSRQGRSSSLLP-KLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 509
S I S Q S L +L G FV G + GN +P+ ++P GT+V N+E
Sbjct: 185 SPIKEQSVQSMSYILASHQLKAGDFVSSGPNVEIRTGNALPLISIPLGTLVHNIE 239
Score = 33.5 bits (73), Expect = 6.3
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +2
Query: 518 GDRGRLARASGNFATVIG-HNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPI 694
G G++ RA+G A +I HN K ++LPSG K P +GIV+ + +
Sbjct: 243 GSGGQVVRAAGTSAQLIKKHN---KYAILRLPSGELKSFPLQCMATIGIVSNLNHFNTDL 299
Query: 695 LKAGRAYHKYKVQRNCWPYVRGV 763
KAG + ++ +R P VRGV
Sbjct: 300 KKAGAS--RWLGRR---PTVRGV 317
>UniRef50_A1W550 Cluster: ApbE family lipoprotein precursor; n=1;
Acidovorax sp. JS42|Rep: ApbE family lipoprotein
precursor - Acidovorax sp. (strain JS42)
Length = 362
Score = 33.5 bits (73), Expect = 6.3
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = +2
Query: 509 EKMGDRGRLARASGNFATVIGHNPDAK-RTRVKLPSGAKKVLPSSNRGMVGIVAGGGRID 685
E+ G L G+ V+G D R V+ PS ++L G+VA G +
Sbjct: 212 ERAGVTDALVNGGGD-VLVMGRQHDRPWRVGVRNPSAPAQLLGVLELQGRGVVASSGDYE 270
Query: 686 KPILKAGRAYHKYKVQRNCWP 748
+ L+AGR H R WP
Sbjct: 271 RGFLRAGRRLHHVLNPRTGWP 291
>UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 185
Score = 33.5 bits (73), Expect = 6.3
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = -3
Query: 509 LKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACV 405
L +AHNGTL S R +I+N + L+TI++L V
Sbjct: 14 LNVAHNGTLGDGSKRQYIANNEIGLLATIDELVGV 48
>UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria
tenella|Rep: Ribosomal protein L2 - Eimeria tenella
Length = 273
Score = 33.1 bits (72), Expect = 8.3
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +3
Query: 411 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 509
G +Y G+ L++GN++P+ +P G+ + N+E
Sbjct: 109 GDIIYIGETIELKIGNILPIKKIPCGSWIHNIE 141
>UniRef50_Q21305 Cluster: Sox (Mammalian sry box) family protein 2,
isoform a; n=3; Caenorhabditis|Rep: Sox (Mammalian sry
box) family protein 2, isoform a - Caenorhabditis
elegans
Length = 283
Score = 33.1 bits (72), Expect = 8.3
Identities = 9/39 (23%), Positives = 27/39 (69%)
Frame = -3
Query: 566 SQWRSFQRHVPDDLYHPFSLKIAHNGTLRHSSNRHHISN 450
SQ+R++ H D + +P+S+++ H ++++ ++ H+++
Sbjct: 245 SQFRAYYDHTKDQMMYPYSIELTHAQNIQNALSQSHVTS 283
>UniRef50_Q0CD71 Cluster: Predicted protein; n=3;
Trichocomaceae|Rep: Predicted protein - Aspergillus
terreus (strain NIH 2624)
Length = 471
Score = 33.1 bits (72), Expect = 8.3
Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = -2
Query: 678 RPPPA---TIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPIT--VAKFPEARARRP 526
R PP T+PT PL LDGRT +G LVR+A L +T + R RP
Sbjct: 3 REPPQSQETVPTSPLDLDGRTL---EGGGQLVRIAVALAALTGQAIRINHIRGNRP 55
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 860,983,124
Number of Sequences: 1657284
Number of extensions: 18445833
Number of successful extensions: 48971
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48958
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68319938570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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