Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120567.Seq
(799 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein ... 231 2e-62
AY994095-1|AAX86008.1| 144|Anopheles gambiae unknown protein. 27 0.51
AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox prote... 25 3.6
AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical prote... 25 3.6
AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical prote... 25 3.6
CR954257-4|CAJ14155.1| 196|Anopheles gambiae predicted protein ... 24 4.7
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 24 6.3
AY330173-1|AAQ16279.1| 202|Anopheles gambiae odorant-binding pr... 23 8.3
AJ618917-1|CAF01996.1| 199|Anopheles gambiae putative odorant-b... 23 8.3
>AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein L8
protein.
Length = 261
Score = 231 bits (565), Expect = 2e-62
Identities = 114/171 (66%), Positives = 128/171 (74%), Gaps = 1/171 (0%)
Frame = +2
Query: 254 LDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEALHR-PICLLW 430
LDYAERHGY+KGVVK II DPGRGAPLAVV+FRDPY+F+ K+LFIA E ++
Sbjct: 32 LDYAERHGYLKGVVKQIIQDPGRGAPLAVVNFRDPYRFRLSKQLFIAAEGMYTGQFVYCG 91
Query: 431 KESNS*SWKCDACWSYA*GYHCVQS*EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 610
+ + G EK GDRG+LAR SGN+A+VI HNPD KRTRVKLP
Sbjct: 92 RRAQLQIGNVIPIGLMPEGTIVCNLEEKTGDRGKLARTSGNYASVIAHNPDTKRTRVKLP 151
Query: 611 SGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVQRNCWPYVRGV 763
SGAKKVLPS+NR MVGIVAGGGRIDKPILKAGRAYHKYKV+RNCWP VRGV
Sbjct: 152 SGAKKVLPSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPKVRGV 202
Score = 105 bits (252), Expect = 2e-24
Identities = 60/122 (49%), Positives = 74/122 (60%), Gaps = 4/122 (3%)
Frame = +3
Query: 162 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRS*ITLNVMDTSRELLRI*SMTLVEVHLWLL 341
MGRVIRAQRKGAGSVF +HTKKRKG PKLR L+ + L + + +
Sbjct: 1 MGRVIRAQRKGAGSVFRAHTKKRKGQPKLRH---LDYAERHGYLKGVVKQIIQDPGRGAP 57
Query: 342 YTSAIHTSSRQGRSSSLL----PKLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 509
+ R S L +YTGQFVYCG++A L++GNV+P+G MPEGTIVCNLE
Sbjct: 58 LAVVNFRDPYRFRLSKQLFIAAEGMYTGQFVYCGRRAQLQIGNVIPIGLMPEGTIVCNLE 117
Query: 510 RK 515
K
Sbjct: 118 EK 119
Score = 33.1 bits (72), Expect = 0.010
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +1
Query: 763 AMNPVEHPHGGG 798
AMNPVEHPHGGG
Sbjct: 203 AMNPVEHPHGGG 214
>AY994095-1|AAX86008.1| 144|Anopheles gambiae unknown protein.
Length = 144
Score = 27.5 bits (58), Expect = 0.51
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 635 SSNRGMVGIVAGGGRIDKPILKAGRAYHK 721
S+ + +G V GG D IL GRAYH+
Sbjct: 81 SAGQVPLGAVVGGHTSDGEILYVGRAYHE 109
>AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox protein
protein.
Length = 338
Score = 24.6 bits (51), Expect = 3.6
Identities = 7/15 (46%), Positives = 13/15 (86%)
Frame = +1
Query: 637 KQQRHGRYCCWRWTY 681
+QQ+HG++CC R ++
Sbjct: 280 QQQQHGQHCCCRGSH 294
>AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 24.6 bits (51), Expect = 3.6
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 269 RHGYIKGVVKDIIHDP 316
R+ +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752
>AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 24.6 bits (51), Expect = 3.6
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 269 RHGYIKGVVKDIIHDP 316
R+ +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752
>CR954257-4|CAJ14155.1| 196|Anopheles gambiae predicted protein
protein.
Length = 196
Score = 24.2 bits (50), Expect = 4.7
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +1
Query: 334 GCCTLPRSIQVQDKEGALHCSRSSTQANLFIVER 435
GCC LP + Q K+ + + + +T+ + E+
Sbjct: 16 GCCALPANTNAQTKQDSSNNNNRTTELFAYPAEQ 49
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 23.8 bits (49), Expect = 6.3
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -3
Query: 518 PFSLKIAHNGTLRHSSNRHHISNF 447
P S ++ H G +RH+ R+ + F
Sbjct: 218 PSSPRMRHQGRIRHADRRYKATQF 241
>AY330173-1|AAQ16279.1| 202|Anopheles gambiae odorant-binding
protein AgamOBP46 protein.
Length = 202
Score = 23.4 bits (48), Expect = 8.3
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 474 AMPEGTIVCNLERKWVIEVV 533
A P+GT VCN E ++++ +
Sbjct: 147 ATPKGTQVCNPEASFLVDCI 166
>AJ618917-1|CAF01996.1| 199|Anopheles gambiae putative
odorant-binding protein OBPjj1 protein.
Length = 199
Score = 23.4 bits (48), Expect = 8.3
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 474 AMPEGTIVCNLERKWVIEVV 533
A P+GT VCN E ++++ +
Sbjct: 144 ATPKGTQVCNPEASFLVDCI 163
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 919,980
Number of Sequences: 2352
Number of extensions: 20107
Number of successful extensions: 58
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83992206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -