Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120567.Seq
(799 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 227 3e-59
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 227 3e-59
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 227 3e-59
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 227 3e-59
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 227 3e-59
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 227 3e-59
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 227 3e-59
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 227 3e-59
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 198 1e-50
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 106 1e-22
D86974-1|BAA13210.2| 884|Homo sapiens KIAA0220 protein. 31 3.6
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 227 bits (556), Expect = 3e-59
Identities = 111/171 (64%), Positives = 129/171 (75%), Gaps = 1/171 (0%)
Frame = +2
Query: 254 LDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEALHR-PICLLW 430
+D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA E +H
Sbjct: 32 VDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCG 91
Query: 431 KESNS*SWKCDACWSYA*GYHCVQS*EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 610
K++ + G EK GDRG+LARASGN+ATVI HNP+ K+TRVKLP
Sbjct: 92 KKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLP 151
Query: 611 SGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVQRNCWPYVRGV 763
SG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK +RNCWP VRGV
Sbjct: 152 SGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGV 202
Score = 92.7 bits (220), Expect = 1e-18
Identities = 54/122 (44%), Positives = 71/122 (58%), Gaps = 4/122 (3%)
Frame = +3
Query: 162 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRS*ITLNVMDTSRELLRI*SMTLVEVHLWLL 341
MGRVIR QRKGAGSVF +H K RKGA +LR+ ++ + + I + +
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRA---VDFAERHGYIKGIVKDIIHDPGRGAP 57
Query: 342 YTSAIHTSSRQGRSSSLL----PKLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 509
+ + + + L ++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LE
Sbjct: 58 LAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLE 117
Query: 510 RK 515
K
Sbjct: 118 EK 119
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 227 bits (556), Expect = 3e-59
Identities = 111/171 (64%), Positives = 129/171 (75%), Gaps = 1/171 (0%)
Frame = +2
Query: 254 LDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEALHR-PICLLW 430
+D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA E +H
Sbjct: 32 VDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCG 91
Query: 431 KESNS*SWKCDACWSYA*GYHCVQS*EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 610
K++ + G EK GDRG+LARASGN+ATVI HNP+ K+TRVKLP
Sbjct: 92 KKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLP 151
Query: 611 SGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVQRNCWPYVRGV 763
SG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK +RNCWP VRGV
Sbjct: 152 SGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGV 202
Score = 92.7 bits (220), Expect = 1e-18
Identities = 54/122 (44%), Positives = 71/122 (58%), Gaps = 4/122 (3%)
Frame = +3
Query: 162 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRS*ITLNVMDTSRELLRI*SMTLVEVHLWLL 341
MGRVIR QRKGAGSVF +H K RKGA +LR+ ++ + + I + +
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRA---VDFAERHGYIKGIVKDIIHDPGRGAP 57
Query: 342 YTSAIHTSSRQGRSSSLL----PKLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 509
+ + + + L ++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LE
Sbjct: 58 LAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLE 117
Query: 510 RK 515
K
Sbjct: 118 EK 119
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 227 bits (556), Expect = 3e-59
Identities = 111/171 (64%), Positives = 129/171 (75%), Gaps = 1/171 (0%)
Frame = +2
Query: 254 LDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEALHR-PICLLW 430
+D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA E +H
Sbjct: 32 VDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCG 91
Query: 431 KESNS*SWKCDACWSYA*GYHCVQS*EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 610
K++ + G EK GDRG+LARASGN+ATVI HNP+ K+TRVKLP
Sbjct: 92 KKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLP 151
Query: 611 SGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVQRNCWPYVRGV 763
SG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK +RNCWP VRGV
Sbjct: 152 SGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGV 202
Score = 93.1 bits (221), Expect = 1e-18
Identities = 55/122 (45%), Positives = 71/122 (58%), Gaps = 4/122 (3%)
Frame = +3
Query: 162 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRS*ITLNVMDTSRELLRI*SMTLVEVHLWLL 341
MGRVIR QRKGAGSVF +H K RKGA +LR+ ++ + + I + +
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRA---VDFAERHGYIKGIVKDIIHDPGRGAP 57
Query: 342 YTSAIHTSSRQGRSSSLL----PKLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 509
+ + + + L ++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LE
Sbjct: 58 LAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLE 117
Query: 510 RK 515
K
Sbjct: 118 EK 119
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 227 bits (556), Expect = 3e-59
Identities = 111/171 (64%), Positives = 129/171 (75%), Gaps = 1/171 (0%)
Frame = +2
Query: 254 LDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEALHR-PICLLW 430
+D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA E +H
Sbjct: 32 VDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCG 91
Query: 431 KESNS*SWKCDACWSYA*GYHCVQS*EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 610
K++ + G EK GDRG+LARASGN+ATVI HNP+ K+TRVKLP
Sbjct: 92 KKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLP 151
Query: 611 SGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVQRNCWPYVRGV 763
SG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK +RNCWP VRGV
Sbjct: 152 SGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGV 202
Score = 92.7 bits (220), Expect = 1e-18
Identities = 54/122 (44%), Positives = 71/122 (58%), Gaps = 4/122 (3%)
Frame = +3
Query: 162 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRS*ITLNVMDTSRELLRI*SMTLVEVHLWLL 341
MGRVIR QRKGAGSVF +H K RKGA +LR+ ++ + + I + +
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRA---VDFAERHGYIKGIVKDIIHDPGRGAP 57
Query: 342 YTSAIHTSSRQGRSSSLL----PKLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 509
+ + + + L ++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LE
Sbjct: 58 LAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLE 117
Query: 510 RK 515
K
Sbjct: 118 EK 119
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 227 bits (556), Expect = 3e-59
Identities = 111/171 (64%), Positives = 129/171 (75%), Gaps = 1/171 (0%)
Frame = +2
Query: 254 LDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEALHR-PICLLW 430
+D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA E +H
Sbjct: 32 VDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCG 91
Query: 431 KESNS*SWKCDACWSYA*GYHCVQS*EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 610
K++ + G EK GDRG+LARASGN+ATVI HNP+ K+TRVKLP
Sbjct: 92 KKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLP 151
Query: 611 SGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVQRNCWPYVRGV 763
SG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK +RNCWP VRGV
Sbjct: 152 SGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGV 202
Score = 93.1 bits (221), Expect = 1e-18
Identities = 55/122 (45%), Positives = 71/122 (58%), Gaps = 4/122 (3%)
Frame = +3
Query: 162 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRS*ITLNVMDTSRELLRI*SMTLVEVHLWLL 341
MGRVIR QRKGAGSVF +H K RKGA +LR+ ++ + + I + +
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRA---VDFAERHGYIKGIVKDIIHDPGRGAP 57
Query: 342 YTSAIHTSSRQGRSSSLL----PKLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 509
+ + + + L ++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LE
Sbjct: 58 LAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLE 117
Query: 510 RK 515
K
Sbjct: 118 EK 119
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 227 bits (556), Expect = 3e-59
Identities = 111/171 (64%), Positives = 129/171 (75%), Gaps = 1/171 (0%)
Frame = +2
Query: 254 LDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEALHR-PICLLW 430
+D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA E +H
Sbjct: 32 VDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCG 91
Query: 431 KESNS*SWKCDACWSYA*GYHCVQS*EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 610
K++ + G EK GDRG+LARASGN+ATVI HNP+ K+TRVKLP
Sbjct: 92 KKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLP 151
Query: 611 SGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVQRNCWPYVRGV 763
SG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK +RNCWP VRGV
Sbjct: 152 SGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGV 202
Score = 93.1 bits (221), Expect = 1e-18
Identities = 55/122 (45%), Positives = 71/122 (58%), Gaps = 4/122 (3%)
Frame = +3
Query: 162 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRS*ITLNVMDTSRELLRI*SMTLVEVHLWLL 341
MGRVIR QRKGAGSVF +H K RKGA +LR+ ++ + + I + +
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRA---VDFAERHGYIKGIVKDIIHDPGRGAP 57
Query: 342 YTSAIHTSSRQGRSSSLL----PKLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 509
+ + + + L ++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LE
Sbjct: 58 LAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLE 117
Query: 510 RK 515
K
Sbjct: 118 EK 119
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 227 bits (556), Expect = 3e-59
Identities = 111/171 (64%), Positives = 129/171 (75%), Gaps = 1/171 (0%)
Frame = +2
Query: 254 LDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEALHR-PICLLW 430
+D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA E +H
Sbjct: 32 VDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCG 91
Query: 431 KESNS*SWKCDACWSYA*GYHCVQS*EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 610
K++ + G EK GDRG+LARASGN+ATVI HNP+ K+TRVKLP
Sbjct: 92 KKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLP 151
Query: 611 SGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVQRNCWPYVRGV 763
SG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK +RNCWP VRGV
Sbjct: 152 SGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGV 202
Score = 92.7 bits (220), Expect = 1e-18
Identities = 54/122 (44%), Positives = 71/122 (58%), Gaps = 4/122 (3%)
Frame = +3
Query: 162 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRS*ITLNVMDTSRELLRI*SMTLVEVHLWLL 341
MGRVIR QRKGAGSVF +H K RKGA +LR+ ++ + + I + +
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRA---VDFAERHGYIKGIVKDIIHDPGRGAP 57
Query: 342 YTSAIHTSSRQGRSSSLL----PKLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 509
+ + + + L ++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LE
Sbjct: 58 LAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLE 117
Query: 510 RK 515
K
Sbjct: 118 EK 119
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 227 bits (556), Expect = 3e-59
Identities = 111/171 (64%), Positives = 129/171 (75%), Gaps = 1/171 (0%)
Frame = +2
Query: 254 LDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEALHR-PICLLW 430
+D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA E +H
Sbjct: 32 VDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCG 91
Query: 431 KESNS*SWKCDACWSYA*GYHCVQS*EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 610
K++ + G EK GDRG+LARASGN+ATVI HNP+ K+TRVKLP
Sbjct: 92 KKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLP 151
Query: 611 SGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVQRNCWPYVRGV 763
SG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK +RNCWP VRGV
Sbjct: 152 SGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGV 202
Score = 92.7 bits (220), Expect = 1e-18
Identities = 54/122 (44%), Positives = 71/122 (58%), Gaps = 4/122 (3%)
Frame = +3
Query: 162 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRS*ITLNVMDTSRELLRI*SMTLVEVHLWLL 341
MGRVIR QRKGAGSVF +H K RKGA +LR+ ++ + + I + +
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRA---VDFAERHGYIKGIVKDIIHDPGRGAP 57
Query: 342 YTSAIHTSSRQGRSSSLL----PKLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 509
+ + + + L ++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LE
Sbjct: 58 LAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLE 117
Query: 510 RK 515
K
Sbjct: 118 EK 119
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 198 bits (484), Expect = 1e-50
Identities = 99/156 (63%), Positives = 114/156 (73%), Gaps = 1/156 (0%)
Frame = +2
Query: 299 DIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEALHR-PICLLWKESNS*SWKCDACWS 475
DIIHDPGRGAPLA V FRDPY+FK R ELFIA E +H K++ +
Sbjct: 1 DIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGT 60
Query: 476 YA*GYHCVQS*EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMV 655
G EK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +V
Sbjct: 61 MPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVV 120
Query: 656 GIVAGGGRIDKPILKAGRAYHKYKVQRNCWPYVRGV 763
G+VAGGGRIDKPILKAGRAYHKYK +RNCWP VRGV
Sbjct: 121 GVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGV 156
Score = 69.7 bits (163), Expect = 1e-11
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = +3
Query: 402 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLERK 515
++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LE K
Sbjct: 36 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEK 73
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 106 bits (254), Expect = 1e-22
Identities = 57/103 (55%), Positives = 67/103 (65%), Gaps = 1/103 (0%)
Frame = +2
Query: 254 LDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEALHR-PICLLW 430
+D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA E +H
Sbjct: 28 VDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCG 87
Query: 431 KESNS*SWKCDACWSYA*GYHCVQS*EKMGDRGRLARASGNFA 559
K++ + G EK GDRG+LARASGN+A
Sbjct: 88 KKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYA 130
Score = 84.6 bits (200), Expect = 4e-16
Identities = 50/118 (42%), Positives = 67/118 (56%), Gaps = 4/118 (3%)
Frame = +3
Query: 174 IRAQRKGAGSVFVSHTKKRKGAPKLRS*ITLNVMDTSRELLRI*SMTLVEVHLWLLYTSA 353
IR QRKGAGSVF +H K RKGA +LR+ ++ + + I + +
Sbjct: 1 IRGQRKGAGSVFRAHVKHRKGAARLRA---VDFAERHGYIKGIVKDIIHDPGRGAPLAKV 57
Query: 354 IHTSSRQGRSSSLL----PKLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLERK 515
+ + + + L ++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LE K
Sbjct: 58 VFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEK 115
>D86974-1|BAA13210.2| 884|Homo sapiens KIAA0220 protein.
Length = 884
Score = 31.5 bits (68), Expect = 3.6
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +1
Query: 706 KGIPQVQGP-T*LLAICTWCAMNPVEHPHGGG 798
+G+PQ+Q P + A+C W M EH H G
Sbjct: 26 RGLPQMQNPPSARKALCNWVRMAAAEHRHSSG 57
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,473,022
Number of Sequences: 237096
Number of extensions: 2909197
Number of successful extensions: 6368
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6368
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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