Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120561.Seq
(739 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41477 Cluster: Late expression factor 4; n=13; Nucleop... 184 3e-45
UniRef50_P17500 Cluster: Major capsid protein; n=15; Nucleopolyh... 103 3e-21
UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata ... 85 2e-15
UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata nucleopolyh... 84 4e-15
UniRef50_P35840 Cluster: Major capsid protein; n=12; Nucleopolyh... 77 5e-13
UniRef50_Q0N422 Cluster: LEF-4; n=8; Nucleopolyhedrovirus|Rep: L... 76 8e-13
UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxoph... 72 1e-11
UniRef50_A0EYX2 Cluster: Late expression factor 4; n=2; Nucleopo... 69 1e-10
UniRef50_Q99GW9 Cluster: Lef-4; n=3; Nucleopolyhedrovirus|Rep: L... 66 1e-09
UniRef50_Q9YMN4 Cluster: Late expression factor 4; n=1; Lymantri... 65 1e-09
UniRef50_Q65345 Cluster: Lef-4 protein; n=1; Autographa californ... 65 1e-09
UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP... 62 2e-08
UniRef50_Q9DHD8 Cluster: LEF-4; n=3; Nucleopolyhedrovirus|Rep: L... 58 3e-07
UniRef50_Q7T9T4 Cluster: Vp39-capsid; n=5; Granulovirus|Rep: Vp3... 49 1e-04
UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum granulovir... 49 1e-04
UniRef50_Q0ZNY8 Cluster: Major viral capsid protein 39; n=3; Nuc... 49 1e-04
UniRef50_Q9DVV4 Cluster: PxORF79 peptide; n=1; Plutella xylostel... 48 2e-04
UniRef50_Q91EW0 Cluster: ORF95 LEF-4; n=4; Granulovirus|Rep: ORF... 47 4e-04
UniRef50_Q9PYT2 Cluster: ORF111; n=4; Granulovirus|Rep: ORF111 -... 46 7e-04
UniRef50_Q8JRX2 Cluster: Late expression factor 4; n=1; Phthorim... 46 0.001
UniRef50_Q6QXM5 Cluster: ORF85; n=1; Agrotis segetum granuloviru... 46 0.001
UniRef50_UPI000150A22F Cluster: AT hook motif family protein; n=... 41 0.028
UniRef50_Q7T9T5 Cluster: Lef-4; n=1; Adoxophyes orana granulovir... 40 0.048
UniRef50_Q9DVV5 Cluster: PxORF78 peptide; n=1; Plutella xylostel... 40 0.064
UniRef50_Q8JRX1 Cluster: Capsid protein VP39; n=1; Phthorimaea o... 39 0.11
UniRef50_Q9PYT3 Cluster: ORF110; n=3; Granulovirus|Rep: ORF110 -... 36 0.78
UniRef50_Q8I326 Cluster: Putative uncharacterized protein PFI061... 35 1.8
UniRef50_A4B586 Cluster: Predicted integral membrane protein; n=... 34 3.2
UniRef50_Q8I393 Cluster: Putative uncharacterized protein PFI027... 34 3.2
UniRef50_Q8XIR0 Cluster: Cation-transporting ATPase; n=12; Clost... 33 7.3
UniRef50_Q2Y8U0 Cluster: Cation-transporting ATPase; n=2; Proteo... 33 7.3
UniRef50_Q1FH36 Cluster: Cation-transporting ATPase; n=1; Clostr... 33 9.7
>UniRef50_P41477 Cluster: Late expression factor 4; n=13;
Nucleopolyhedrovirus|Rep: Late expression factor 4 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 464
Score = 184 bits (447), Expect = 3e-45
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = -1
Query: 256 EEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVKK 77
+EISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVKK
Sbjct: 10 KEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVKK 69
Query: 76 TNSKHKKFVYWPKDTNALVPLVWRE 2
TNSKHKKFVYWPKDTNALVPLVWRE
Sbjct: 70 TNSKHKKFVYWPKDTNALVPLVWRE 94
>UniRef50_P17500 Cluster: Major capsid protein; n=15;
Nucleopolyhedrovirus|Rep: Major capsid protein - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 351
Score = 103 bits (248), Expect = 3e-21
Identities = 49/79 (62%), Positives = 57/79 (72%)
Frame = +3
Query: 498 FRRSDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEE 677
+ DNQ+K TIARHLVG+KERG+KRIL+P+ NY VFNL MM AEQLIFHLIY+N
Sbjct: 66 YDEDDNQYKRTIARHLVGHKERGVKRILVPTRANYMTVFNLPGMMLAEQLIFHLIYDNRL 125
Query: 678 AVNVICDNLKYTEVFTSGT 734
VN IC +LK E F T
Sbjct: 126 EVNRICASLKNNENFIDNT 144
Score = 95.9 bits (228), Expect = 9e-19
Identities = 43/69 (62%), Positives = 53/69 (76%)
Frame = +1
Query: 301 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 480
MAL+ G++ R+ N CIF +I FD+C+TY+SPCS DA DDGWFIC+ HL RFKMS
Sbjct: 1 MALVSPGVSSRRS-TNHCIFGAIEPFDSCVTYRSPCSSDASVDDGWFICDYHLKLRFKMS 59
Query: 481 KMVLPIFDE 507
KMVLPI+DE
Sbjct: 60 KMVLPIYDE 68
>UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata
NPV-A|Rep: Vp39 capsid - Mamestra configurata NPV-A
Length = 325
Score = 85.0 bits (201), Expect = 2e-15
Identities = 46/81 (56%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = +1
Query: 301 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 480
MAL P G Q + N CIF +I FD C TY SPCS DA +DGWFIC HL RF+M
Sbjct: 1 MALTPYGS--NQPQSNNCIFGAIRPFDTCRTYSSPCSNDASQEDGWFICEYHLSIRFRME 58
Query: 481 KMVLPIFD-EATINSK*RSLG 540
KMVLPI D E TI + RS+G
Sbjct: 59 KMVLPIPDAEGTIYN--RSVG 77
Score = 60.1 bits (139), Expect = 6e-08
Identities = 29/70 (41%), Positives = 42/70 (60%)
Frame = +3
Query: 519 FKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICD 698
+ ++ + L+ E R+LIP+ TNY++V L SM EQLIFH+IY+ + N IC
Sbjct: 72 YNRSVGKSLISGTESN--RVLIPTKTNYEDVLKLPSMSLPEQLIFHMIYDEPDKQNEICK 129
Query: 699 NLKYTEVFTS 728
L+Y E F S
Sbjct: 130 LLQYNENFHS 139
>UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: VP39 - Clanis bilineata
nucleopolyhedrosis virus
Length = 350
Score = 83.8 bits (198), Expect = 4e-15
Identities = 40/68 (58%), Positives = 48/68 (70%)
Frame = +1
Query: 301 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 480
MAL+ GMA ++ N CIF S+ FDAC Y+SPCS DA ++DGW IC+ HL RFKM
Sbjct: 1 MALVVSGMATGRIN-NYCIFGSVQPFDACGPYRSPCSDDAKNNDGWLICDYHLSTRFKME 59
Query: 481 KMVLPIFD 504
KMVLPI D
Sbjct: 60 KMVLPIPD 67
Score = 62.5 bits (145), Expect = 1e-08
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = +3
Query: 528 TIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLK 707
T+AR LV +K G +RIL+P+ NY V N+ ++ AEQ IFH+IY N+ IC L+
Sbjct: 76 TLARSLVNHKAIGDERILVPTKRNYMSVLNILALQLAEQYIFHIIYENDVERERICQMLE 135
Query: 708 YTEVFTSGT 734
+E F + T
Sbjct: 136 ISERFENDT 144
>UniRef50_P35840 Cluster: Major capsid protein; n=12;
Nucleopolyhedrovirus|Rep: Major capsid protein -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 356
Score = 77.0 bits (181), Expect = 5e-13
Identities = 34/68 (50%), Positives = 47/68 (69%)
Frame = +1
Query: 301 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 480
MAL+ ++ ++R N C+F ++ FD C Y SPCSPD+ ++DGWFIC+ H RFK+
Sbjct: 1 MALVSGALSTNRLR-NYCVFGAVQPFDNCRAYGSPCSPDSTNNDGWFICDYHSSIRFKIE 59
Query: 481 KMVLPIFD 504
KMVLPI D
Sbjct: 60 KMVLPIPD 67
Score = 72.1 bits (169), Expect = 1e-11
Identities = 33/74 (44%), Positives = 47/74 (63%)
Frame = +3
Query: 513 NQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVI 692
N + T+ + LV +K G R+LIP+ NY+ V NLNSM AEQL+ H+IY+N EA +
Sbjct: 71 NIYNRTVGKSLVNHKTLGAARVLIPTRDNYKTVLNLNSMSLAEQLVTHMIYDNVEAQGAV 130
Query: 693 CDNLKYTEVFTSGT 734
C L++ E F + T
Sbjct: 131 CKALQHNENFQTET 144
>UniRef50_Q0N422 Cluster: LEF-4; n=8; Nucleopolyhedrovirus|Rep:
LEF-4 - Clanis bilineata nucleopolyhedrosis virus
Length = 497
Score = 76.2 bits (179), Expect = 8e-13
Identities = 44/84 (52%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = -1
Query: 253 EISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNI-ISSVKK 77
EISYSINFSQDLLY +LN+YI N+ L ++Y D D N RTR+ + S N I I S K
Sbjct: 22 EISYSINFSQDLLYILLNAYISNNFVLHEKYTDFVDVNDVRTRLSVDSNTNKIKIVSTLK 81
Query: 76 TNSKHKKFVYWPKDTNALVPLVWR 5
T ++FVY + N LVPLV R
Sbjct: 82 TPQSLRRFVY--INGNGLVPLVDR 103
>UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxophyes
honmai NPV|Rep: Major capsid protein VP39 - Adoxophyes
honmai nucleopolyhedrovirus
Length = 312
Score = 72.1 bits (169), Expect = 1e-11
Identities = 34/68 (50%), Positives = 41/68 (60%)
Frame = +1
Query: 301 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 480
MAL+P G+ + N CIFA + SFDAC Y + CS DA +DGW+IC H FKM
Sbjct: 1 MALVPAGLTSSRSNSN-CIFAGVQSFDACYRYPNECSKDADSNDGWYICEYHASVHFKME 59
Query: 481 KMVLPIFD 504
KM L I D
Sbjct: 60 KMSLAIPD 67
Score = 66.1 bits (154), Expect = 8e-10
Identities = 30/65 (46%), Positives = 40/65 (61%)
Frame = +3
Query: 528 TIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLK 707
T+ R LV + E G RIL+P+ NY+ V N+ + AE LI H+IY N E IC+ LK
Sbjct: 76 TVGRSLVKHTEEGTARILVPNKNNYESVLNVQDLPLAEALIIHMIYENLEKQKEICERLK 135
Query: 708 YTEVF 722
+TE F
Sbjct: 136 FTEHF 140
>UniRef50_A0EYX2 Cluster: Late expression factor 4; n=2;
Nucleopolyhedrovirus|Rep: Late expression factor 4 -
Ecotropis obliqua NPV
Length = 471
Score = 68.9 bits (161), Expect = 1e-10
Identities = 41/84 (48%), Positives = 50/84 (59%)
Frame = -1
Query: 256 EEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVKK 77
+EISYS+N SQDLLYKIL +YI ++L Q+Y D DEN RTRI I SV K
Sbjct: 8 KEISYSVNVSQDLLYKILTTYISKKFTLTQEYIDCVDENNVRTRIVADQ-----IKSVFK 62
Query: 76 TNSKHKKFVYWPKDTNALVPLVWR 5
+KFV+ D +VPLV R
Sbjct: 63 IPQSLQKFVH--VDKTIVVPLVKR 84
>UniRef50_Q99GW9 Cluster: Lef-4; n=3; Nucleopolyhedrovirus|Rep:
Lef-4 - Helicoverpa armigera nucleopolyhedrovirus G4
Length = 461
Score = 65.7 bits (153), Expect = 1e-09
Identities = 39/84 (46%), Positives = 47/84 (55%)
Frame = -1
Query: 256 EEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVKK 77
+EISY+IN SQDLLY I NSYIV + QY DL D N RTR + SV K
Sbjct: 5 KEISYTINLSQDLLYIIFNSYIVKHMDYRTQYCDLIDCNDVRTRFE-----RGTVQSVHK 59
Query: 76 TNSKHKKFVYWPKDTNALVPLVWR 5
N K+F ++ DT +V LV R
Sbjct: 60 KNVFMKRFAHYVNDTATIVGLVDR 83
>UniRef50_Q9YMN4 Cluster: Late expression factor 4; n=1; Lymantria
dispar MNPV|Rep: Late expression factor 4 - Lymantria
dispar multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 485
Score = 65.3 bits (152), Expect = 1e-09
Identities = 39/84 (46%), Positives = 54/84 (64%)
Frame = -1
Query: 256 EEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVKK 77
+EISYSIN SQDLL+ IL SYI N+ L+ +YF+ +EN R+R+ +S++K+
Sbjct: 25 KEISYSINLSQDLLFIILESYISKNFVLSCEYFECVNENDVRSRL----TGGRFVSTIKQ 80
Query: 76 TNSKHKKFVYWPKDTNALVPLVWR 5
T S +KFVY N L+PLV R
Sbjct: 81 TESL-RKFVY--VHENGLMPLVDR 101
>UniRef50_Q65345 Cluster: Lef-4 protein; n=1; Autographa californica
nucleopolyhedrovirus|Rep: Lef-4 protein - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 64
Score = 65.3 bits (152), Expect = 1e-09
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +2
Query: 5 SPHQRHQRVGIFRPINKFFVFGISLFHA 88
SPHQRHQRVGIFRPINKFFVFGISLFHA
Sbjct: 37 SPHQRHQRVGIFRPINKFFVFGISLFHA 64
>UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP39
- Spodoptera litura multicapsid nucleopolyhedrovirus
(SpltMNPV)
Length = 302
Score = 61.7 bits (143), Expect = 2e-08
Identities = 29/66 (43%), Positives = 40/66 (60%)
Frame = +3
Query: 531 IARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLKY 710
+ + LV + R RILIP+ NYQ V N++ + AE+L+ HLIYNN A IC+ L+
Sbjct: 79 VGKSLVSHNARANDRILIPTQENYQAVMNVSMLPPAERLVLHLIYNNRTAAAEICNQLRQ 138
Query: 711 TEVFTS 728
E F S
Sbjct: 139 QENFRS 144
Score = 58.0 bits (134), Expect = 2e-07
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +1
Query: 301 MALMPVGMAPRQMRVNRCIFASI--VSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFK 474
MAL+ G A +M+ N CIF + + F+ C Y+SPCS DA +DG F+C HL + FK
Sbjct: 1 MALVSGGNANSRMK-NYCIFQGVRPIEFNQCSNYRSPCSDDASQNDGVFMCQYHLSRFFK 59
Query: 475 MSKMVLPIFD 504
+ K + I D
Sbjct: 60 IEKTSIAIPD 69
>UniRef50_Q9DHD8 Cluster: LEF-4; n=3; Nucleopolyhedrovirus|Rep:
LEF-4 - Spodoptera litura multicapsid
nucleopolyhedrovirus (SpltMNPV)
Length = 475
Score = 57.6 bits (133), Expect = 3e-07
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 11/93 (11%)
Frame = -1
Query: 256 EEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQS----------- 110
+EISY++N SQDLLY I ++YI + Q+Y D+ D +G R+RI +Q
Sbjct: 6 KEISYTVNVSQDLLYIIFDTYISEKFQFKQEYRDVTDNDGVRSRILVQDDGGDDGDGKIV 65
Query: 109 ACNNIISSVKKTNSKHKKFVYWPKDTNALVPLV 11
N I VKK+ ++FVY ++LVPL+
Sbjct: 66 IDNGTICRVKKSTKSTERFVY--LSGHSLVPLI 96
>UniRef50_Q7T9T4 Cluster: Vp39-capsid; n=5; Granulovirus|Rep:
Vp39-capsid - Adoxophyes orana granulovirus (AoGV)
Length = 291
Score = 49.2 bits (112), Expect = 1e-04
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Frame = +1
Query: 316 VGMAPRQMRVNRCIFASIVS----FDACITYKSPCSPDAYHD--DGWFICNSHLIKRFKM 477
+ + P ++ N CIF +V + C Y SPCSPDA + DG FICN HL K FK+
Sbjct: 4 INVGPCELN-NYCIFQGVVGMMPDYYRCENYSSPCSPDASNSNLDGTFICNYHLNKYFKI 62
Query: 478 SK 483
K
Sbjct: 63 LK 64
Score = 35.9 bits (79), Expect = 1.0
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +3
Query: 477 VKNGFAHFRRSDNQ-FKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIF 653
+K+ F DN+ FKM + + L+ + + + +++ +S E++I
Sbjct: 63 LKSSFRIPSGKDNKSFKMLVGQSLLQQTDNDTNKNKVLIPLDHELYLKTSSRNSVERMII 122
Query: 654 HLIYNNEEAVNVICDNLKYTEVF 722
+ IYN++E + +CD L E F
Sbjct: 123 YTIYNDKEKIKDLCDILMKQEFF 145
>UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum
granulovirus|Rep: ORF086 - Agrotis segetum granulosis
virus (AsGV) (Agrotis segetumgranulovirus)
Length = 292
Score = 49.2 bits (112), Expect = 1e-04
Identities = 26/53 (49%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +1
Query: 346 NRCIFASIV--SFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVLPI 498
N CIF + F C Y+ PC Y+DDG FIC HL K FKM KMV+ I
Sbjct: 12 NLCIFQGVQPPEFLNCRPYEPPCI-QPYNDDGTFICQYHLAKYFKMEKMVVRI 63
>UniRef50_Q0ZNY8 Cluster: Major viral capsid protein 39; n=3;
Nucleopolyhedrovirus|Rep: Major viral capsid protein 39
- Neodiprion abietis nucleopolyhedrovirus
Length = 315
Score = 48.8 bits (111), Expect = 1e-04
Identities = 16/45 (35%), Positives = 33/45 (73%)
Frame = +3
Query: 573 RILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLK 707
R+++P+ NY+++F + + + QL+FHL+Y N+ A++ IC ++K
Sbjct: 104 RVIVPTRRNYEDIFKVAYLPISYQLVFHLLYQNQSAIDKICQDVK 148
>UniRef50_Q9DVV4 Cluster: PxORF79 peptide; n=1; Plutella xylostella
granulovirus|Rep: PxORF79 peptide - Plutella xylostella
granulovirus
Length = 320
Score = 48.4 bits (110), Expect = 2e-04
Identities = 28/62 (45%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Frame = +1
Query: 322 MAPRQMRV-NRCIFASIVSFDA--CITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVL 492
M+ RQ RV N CIF ++ ++ C CS DA +DDG FICN HL F + KM L
Sbjct: 2 MSLRQNRVYNNCIFQAVSYSNSSLCADPVLHCSKDASNDDGTFICNHHLSMYFPLEKMTL 61
Query: 493 PI 498
I
Sbjct: 62 EI 63
Score = 39.5 bits (88), Expect = 0.084
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Frame = +3
Query: 519 FKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEA-----V 683
FK+ I + LV ++ + I+IPS NY + +N+M AE+ I + IY +
Sbjct: 71 FKLLIGKSLV--QQDATRNIIIPSKANYIDYLRVNNMSPAEKFIMYSIYGESATEPTGLI 128
Query: 684 NVICDNLKYTEVFT 725
+C++L+ + +T
Sbjct: 129 TQLCESLRSQDFYT 142
>UniRef50_Q91EW0 Cluster: ORF95 LEF-4; n=4; Granulovirus|Rep: ORF95
LEF-4 - Cydia pomonella granulosis virus (CpGV) (Cydia
pomonellagranulovirus)
Length = 480
Score = 47.2 bits (107), Expect = 4e-04
Identities = 30/85 (35%), Positives = 47/85 (55%)
Frame = -1
Query: 256 EEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVKK 77
+E+SY+ +SQD+LY+ L ++ N AQ Y ++YD N RTRI ++S+VKK
Sbjct: 6 QEVSYTFTYSQDVLYR-LKGWLDANLCDAQSYVEVYDTNDVRTRI----YDGGVMSTVKK 60
Query: 76 TNSKHKKFVYWPKDTNALVPLVWRE 2
+ + V D VP++ RE
Sbjct: 61 RLVESGRVVVMVGDN--FVPMINRE 83
>UniRef50_Q9PYT2 Cluster: ORF111; n=4; Granulovirus|Rep: ORF111 -
Xestia c-nigrum granulosis virus (XnGV) (Xestia
c-nigrumgranulovirus)
Length = 329
Score = 46.4 bits (105), Expect = 7e-04
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 346 NRCIFASIV--SFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVLPI 498
N CIF + F C Y PCS D + DG F+C+ HL + FK+ K V I
Sbjct: 16 NLCIFQGVQPPEFMNCGIYTPPCSDDCVNKDGTFVCSYHLARYFKLKKEVFEI 68
Score = 35.1 bits (77), Expect = 1.8
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +3
Query: 507 SDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAV 683
++ FK + L+ RI IP+ NY N+ +M E+ +F+ IY+ + V
Sbjct: 73 NNTSFKYLVGVSLIQQNVPTANRITIPAKDNYYSYLNVANMSSMEKYVFYSIYDEPDTV 131
>UniRef50_Q8JRX2 Cluster: Late expression factor 4; n=1; Phthorimaea
operculella granulovirus|Rep: Late expression factor 4 -
Phthorimaea operculella granulovirus
Length = 441
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/45 (40%), Positives = 33/45 (73%)
Frame = -1
Query: 256 EEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRI 122
+E+SY+ +SQD+LY++ + ++ N + + +Y ++YDEN RTRI
Sbjct: 6 QEVSYTFTYSQDVLYRLAD-WLEANMTKSDEYVEMYDENDTRTRI 49
>UniRef50_Q6QXM5 Cluster: ORF85; n=1; Agrotis segetum
granulovirus|Rep: ORF85 - Agrotis segetum granulosis
virus (AsGV) (Agrotis segetumgranulovirus)
Length = 468
Score = 45.6 bits (103), Expect = 0.001
Identities = 30/84 (35%), Positives = 50/84 (59%)
Frame = -1
Query: 253 EISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVKKT 74
EISY+ F QD+LY I N ++ ++S+ ++Y ++ D+N R+RI I + I SVKK+
Sbjct: 9 EISYTFTFPQDMLYLIKN-FLDKHFSIKEEYVEVLDKNNVRSRIFI----DGTIKSVKKS 63
Query: 73 NSKHKKFVYWPKDTNALVPLVWRE 2
+ + V P + VP++ RE
Sbjct: 64 VVESGRCVV-PL-VDGFVPMIERE 85
>UniRef50_UPI000150A22F Cluster: AT hook motif family protein; n=1;
Tetrahymena thermophila SB210|Rep: AT hook motif family
protein - Tetrahymena thermophila SB210
Length = 799
Score = 41.1 bits (92), Expect = 0.028
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +1
Query: 127 ECESRFRRTNRNIVVPANN*E-QYKNLKFYTTNLG*NLLNKRFLLNHKIAVVHIYNGNNM 303
E + F+ N+N ++ NN Y N + +N+ N+ + L+N KI H +N N +
Sbjct: 156 EYNNDFQYNNKNAILNNNNNNIAYNNNSNFMSNISNNINKSQNLINDKINFNHNFNQNEI 215
Query: 304 ALMPVGMAPRQ 336
L PVG P++
Sbjct: 216 NLTPVGQQPQK 226
>UniRef50_Q7T9T5 Cluster: Lef-4; n=1; Adoxophyes orana
granulovirus|Rep: Lef-4 - Adoxophyes orana granulovirus
(AoGV)
Length = 452
Score = 40.3 bits (90), Expect = 0.048
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = -1
Query: 256 EEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRI 122
+EI+Y+ +SQD++YKI N ++ N L + Y ++ D + RTRI
Sbjct: 13 QEIAYTFAYSQDVIYKI-NDWLQQNVKLHETYVEIIDCDNLRTRI 56
>UniRef50_Q9DVV5 Cluster: PxORF78 peptide; n=1; Plutella xylostella
granulovirus|Rep: PxORF78 peptide - Plutella xylostella
granulovirus
Length = 432
Score = 39.9 bits (89), Expect = 0.064
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = -1
Query: 253 EISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRI 122
E+SY+ + QD+LY I + + ++Y ++ DENG+RTR+
Sbjct: 5 EVSYTFTYPQDVLYSI-KALFDQRLQVVEEYVEIIDENGYRTRM 47
>UniRef50_Q8JRX1 Cluster: Capsid protein VP39; n=1; Phthorimaea
operculella granulovirus|Rep: Capsid protein VP39 -
Phthorimaea operculella granulovirus
Length = 293
Score = 39.1 bits (87), Expect = 0.11
Identities = 23/49 (46%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +1
Query: 346 NRCIFASI-VSFDACITYKSPCSPDAYHD--DGWFICNSHLIKRFKMSK 483
N CIF + FD C Y CS DA + DG FICN HL K F++ K
Sbjct: 13 NYCIFQGVNYQFD-CDGYTRQCSEDARYSQLDGTFICNFHLGKYFRILK 60
>UniRef50_Q9PYT3 Cluster: ORF110; n=3; Granulovirus|Rep: ORF110 -
Xestia c-nigrum granulosis virus (XnGV) (Xestia
c-nigrumgranulovirus)
Length = 447
Score = 36.3 bits (80), Expect = 0.78
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = -1
Query: 265 YD*EEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRI---PIQSACNNI 95
+D E+SY++ QDLLYKI Y+ + + Y ++ D N RTR+ ++S +
Sbjct: 9 HDEYEMSYTLTLPQDLLYKI-KQYLDKRFFNKECYVEIIDVNHTRTRLQDSKLESVTKRL 67
Query: 94 ISSVK 80
+ S K
Sbjct: 68 VDSNK 72
>UniRef50_Q8I326 Cluster: Putative uncharacterized protein PFI0615w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFI0615w - Plasmodium falciparum
(isolate 3D7)
Length = 906
Score = 35.1 bits (77), Expect = 1.8
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 100 YCKRSE*VYECESRFRRTNRNIVV-PANN*EQYKNLKFYTTNLG*NLLNKRFLLNHK 267
Y K E + C RF++TNR I++ NN E F+T N+ N++ R L +K
Sbjct: 573 YRKEKENLKLCFVRFKKTNRCIIIKEKNNEEDNLQSTFFTENIKSNIIKSRKYLENK 629
>UniRef50_A4B586 Cluster: Predicted integral membrane protein; n=2;
Alteromonadales|Rep: Predicted integral membrane protein
- Alteromonas macleodii 'Deep ecotype'
Length = 222
Score = 34.3 bits (75), Expect = 3.2
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = -1
Query: 319 PRALAPYCCRYKYGPRQFYD*EEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDEN 140
PR + Y C +++GP Q S S F + +++S + PN +Q + Y N
Sbjct: 97 PRFNSEYDCEHEFGPNQCQQVNNNSGSF-FMPFMAGYMVSSLLSPNRYYSQPLYTSYSYN 155
Query: 139 G-FRTRIPIQSACNNIISSVKKTNSKHKKFVYWPKDT 32
FR+R I + ++K N + K VY PK T
Sbjct: 156 SPFRSRW-ITADGYVFDGDIRKRNYRVNKDVYKPKPT 191
>UniRef50_Q8I393 Cluster: Putative uncharacterized protein PFI0275w;
n=3; Plasmodium|Rep: Putative uncharacterized protein
PFI0275w - Plasmodium falciparum (isolate 3D7)
Length = 1220
Score = 34.3 bits (75), Expect = 3.2
Identities = 23/97 (23%), Positives = 46/97 (47%)
Frame = +1
Query: 91 ILCYCKRSE*VYECESRFRRTNRNIVVPANN*EQYKNLKFYTTNLG*NLLNKRFLLNHKI 270
I+ Y SE +Y+ + ++ +N+N NN + +L T +L N+ N + +++
Sbjct: 692 IIIYKNDSEDIYDWKYAYKISNKNNNNNNNN-ITFNDLHIVTQSLSQNIYNIVAITDNRY 750
Query: 271 AVVHIYNGNNMALMPVGMAPRQMRVNRCIFASIVSFD 381
+ H YN N + M Q+ V CI ++ ++
Sbjct: 751 IIFHYYNFKNNTVNICYMNIEQIYVPTCISGNLFFYN 787
>UniRef50_Q8XIR0 Cluster: Cation-transporting ATPase; n=12;
Clostridium|Rep: Cation-transporting ATPase -
Clostridium perfringens
Length = 849
Score = 33.1 bits (72), Expect = 7.3
Identities = 17/54 (31%), Positives = 32/54 (59%)
Frame = -3
Query: 599 IGCAWN*NSLDTSFFISN*MPSDRHFELIVASSKMGKTIFDILKRLMRWLLQIN 438
IG A + D + S+ + D +FE IV++ + G+ I+D +++ +R+LL N
Sbjct: 604 IGVAMGISGTDVTKEASSMILMDDNFETIVSAVEEGRIIYDNIRKFIRYLLSCN 657
>UniRef50_Q2Y8U0 Cluster: Cation-transporting ATPase; n=2;
Proteobacteria|Rep: Cation-transporting ATPase -
Nitrosospira multiformis (strain ATCC 25196 / NCIMB
11849)
Length = 965
Score = 33.1 bits (72), Expect = 7.3
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = -3
Query: 599 IGCAWN*NSLDTSFFISN*MPSDRHFELIVASSKMGKTIFDILKRLMRWLLQIN 438
IG A D S ++ + +D +F IVA+ + G+TIF +++ +R+LL N
Sbjct: 693 IGVAMGITGTDVSREAADMVLTDDNFASIVAAVEEGRTIFSNIRKFLRYLLSSN 746
>UniRef50_Q1FH36 Cluster: Cation-transporting ATPase; n=1;
Clostridium phytofermentans ISDg|Rep:
Cation-transporting ATPase - Clostridium phytofermentans
ISDg
Length = 590
Score = 32.7 bits (71), Expect = 9.7
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = -3
Query: 599 IGCAWN*NSLDTSFFISN*MPSDRHFELIVASSKMGKTIFDILKRLMRWLLQIN 438
IGCA D + ++ + +D +F IVA+ K G+ I+D +++ + +LL N
Sbjct: 355 IGCAMGKGGTDVAKNAADMILADDNFATIVAAVKEGRGIYDNIRKSIHFLLSSN 408
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 705,293,972
Number of Sequences: 1657284
Number of extensions: 13399514
Number of successful extensions: 31315
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 30246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31305
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -