Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120561.Seq
         (739 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    24   1.1  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    24   1.5  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    24   1.5  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   5.9  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    21   7.9  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   7.9  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +1

Query: 124 YECESRFRRTNRNIVVPANN*EQYKNLKFY 213
           Y+CE   R   +    P N+ EQY N  +Y
Sbjct: 64  YDCEGVIRHHGQWNYSPDNHFEQYPNPTYY 93


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -1

Query: 91  SSVKKTNSKHK-KFVYWPKDTNALVPLV 11
           S V+  N K   KF +WP   NAL+ L+
Sbjct: 36  SLVRVENGKKVFKFAWWPLTRNALLVLI 63


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -1

Query: 91  SSVKKTNSKHK-KFVYWPKDTNALVPLV 11
           S V+  N K   KF +WP   NAL+ L+
Sbjct: 36  SLVRVENGKKVFKFAWWPLTRNALLVLI 63


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +1

Query: 367 IVSFDACITYKSPCSPD 417
           ++++  C+  K PCSP+
Sbjct: 53  LLNYINCLLEKGPCSPE 69


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 385 CITYKSPCSPD 417
           C+  K PC+PD
Sbjct: 48  CLLEKKPCTPD 58


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 283 YGPRQFYD*EEISYSINFSQDLLYKILNS 197
           Y  + FY    IS SI  +    Y+ILNS
Sbjct: 227 YSKKVFYSKIIISGSIFMTTTSFYRILNS 255


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,072
Number of Sequences: 336
Number of extensions: 3738
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)