Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120559.Seq
         (764 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ578339-1|CAE18340.1|  106|Homo sapiens immunoglobulin lambda-1...    30   7.9  
AF121407-1|AAD29356.1|   95|Homo sapiens immunoglobulin lambda l...    30   7.9  

>AJ578339-1|CAE18340.1|  106|Homo sapiens immunoglobulin lambda-1
           variable region protein.
          Length = 106

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +3

Query: 489 TNWPNLIKKSKQFRKL*NSEN*IGAQQIHGYAQHPGNDPAAV 614
           T  P++   + Q  ++    N IG++ +H Y Q PG DP  V
Sbjct: 2   TQPPSVSVATAQMARITCGGNNIGSKAVHWYQQKPGQDPVLV 43


>AF121407-1|AAD29356.1|   95|Homo sapiens immunoglobulin lambda
           light chain variable region protein.
          Length = 95

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +3

Query: 489 TNWPNLIKKSKQFRKL*NSEN*IGAQQIHGYAQHPGNDPAAV 614
           T  P++   + Q  ++    N IG++ +H Y Q PG DP  V
Sbjct: 4   TQPPSVSVATAQMARISCGGNNIGSKAVHWYQQKPGQDPVLV 45


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,614,959
Number of Sequences: 237096
Number of extensions: 1690153
Number of successful extensions: 3783
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3783
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)