BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120558.Seq
(754 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X16064-1|CAA34200.1| 172|Homo sapiens protein ( Human mRNA for ... 95 3e-19
CR457036-1|CAG33317.1| 172|Homo sapiens TPT1 protein. 95 3e-19
BC052333-1|AAH52333.1| 172|Homo sapiens tumor protein, translat... 95 3e-19
BC012431-1|AAH12431.1| 172|Homo sapiens tumor protein, translat... 95 3e-19
BC003352-1|AAH03352.1| 172|Homo sapiens tumor protein, translat... 95 3e-19
AY334563-1|AAQ01550.1| 172|Homo sapiens TCTP protein. 95 3e-19
AY117678-1|AAM51565.1| 172|Homo sapiens p02 protein protein. 95 3e-19
AL138963-4|CAH72035.1| 188|Homo sapiens tumor protein, translat... 95 3e-19
AL138963-3|CAH72034.1| 172|Homo sapiens tumor protein, translat... 95 3e-19
AJ400717-1|CAB87812.1| 172|Homo sapiens translationally control... 95 3e-19
BC022436-1|AAH22436.1| 138|Homo sapiens TPT1 protein protein. 73 1e-12
AL138963-2|CAH72033.1| 138|Homo sapiens tumor protein, translat... 73 1e-12
AY572224-1|AAS76644.1| 140|Homo sapiens TPT1-like protein protein. 62 2e-09
AK126598-1|BAC86606.1| 140|Homo sapiens protein ( Homo sapiens ... 60 8e-09
AY121805-1|AAM82753.1| 412|Homo sapiens BJ-HCC-24 tumor antigen... 48 3e-05
AK000037-1|BAA90897.1| 412|Homo sapiens protein ( Homo sapiens ... 48 3e-05
AF072098-1|AAD48084.1| 114|Homo sapiens HDCMB21P protein. 46 2e-04
BC117259-1|AAI17260.1| 1581|Homo sapiens LOC200383 protein protein. 31 5.9
AK027182-1|BAB15685.1| 366|Homo sapiens protein ( Homo sapiens ... 31 5.9
AB051484-1|BAB21788.2| 2182|Homo sapiens KIAA1697 protein protein. 31 5.9
>X16064-1|CAA34200.1| 172|Homo sapiens protein ( Human mRNA for
translationally controlled tumor protein. ).
Length = 172
Score = 94.7 bits (225), Expect = 3e-19
Identities = 53/150 (35%), Positives = 85/150 (56%), Gaps = 3/150 (2%)
Frame = -3
Query: 692 MKIYKDIITGDEMFSDTYKMK-LVDEVIYEVTGRLVTRAQGDIQIEGFNXXXXXXXXXXX 516
M IY+D+I+ DEMFSD YK++ + D + EV G++V+R +G+I
Sbjct: 1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60
Query: 515 RP*ERS*HSPEPQASRNIRFGD--KKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNK 342
+ + +++ K++Y Y+KDYMK + KLEE+ P++V+ F T +
Sbjct: 61 GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120
Query: 341 VMKDILGRFKELQFFTGESMDCDGMVAMMN 252
+K IL FK QFF GE+M+ DGMVA+++
Sbjct: 121 QIKHILANFKNYQFFIGENMNPDGMVALLD 150
>CR457036-1|CAG33317.1| 172|Homo sapiens TPT1 protein.
Length = 172
Score = 94.7 bits (225), Expect = 3e-19
Identities = 53/150 (35%), Positives = 85/150 (56%), Gaps = 3/150 (2%)
Frame = -3
Query: 692 MKIYKDIITGDEMFSDTYKMK-LVDEVIYEVTGRLVTRAQGDIQIEGFNXXXXXXXXXXX 516
M IY+D+I+ DEMFSD YK++ + D + EV G++V+R +G+I
Sbjct: 1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60
Query: 515 RP*ERS*HSPEPQASRNIRFGD--KKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNK 342
+ + +++ K++Y Y+KDYMK + KLEE+ P++V+ F T +
Sbjct: 61 GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120
Query: 341 VMKDILGRFKELQFFTGESMDCDGMVAMMN 252
+K IL FK QFF GE+M+ DGMVA+++
Sbjct: 121 QIKHILANFKNYQFFIGENMNPDGMVALLD 150
>BC052333-1|AAH52333.1| 172|Homo sapiens tumor protein,
translationally-controlled 1 protein.
Length = 172
Score = 94.7 bits (225), Expect = 3e-19
Identities = 53/150 (35%), Positives = 85/150 (56%), Gaps = 3/150 (2%)
Frame = -3
Query: 692 MKIYKDIITGDEMFSDTYKMK-LVDEVIYEVTGRLVTRAQGDIQIEGFNXXXXXXXXXXX 516
M IY+D+I+ DEMFSD YK++ + D + EV G++V+R +G+I
Sbjct: 1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60
Query: 515 RP*ERS*HSPEPQASRNIRFGD--KKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNK 342
+ + +++ K++Y Y+KDYMK + KLEE+ P++V+ F T +
Sbjct: 61 GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120
Query: 341 VMKDILGRFKELQFFTGESMDCDGMVAMMN 252
+K IL FK QFF GE+M+ DGMVA+++
Sbjct: 121 QIKHILANFKNYQFFIGENMNPDGMVALLD 150
>BC012431-1|AAH12431.1| 172|Homo sapiens tumor protein,
translationally-controlled 1 protein.
Length = 172
Score = 94.7 bits (225), Expect = 3e-19
Identities = 53/150 (35%), Positives = 85/150 (56%), Gaps = 3/150 (2%)
Frame = -3
Query: 692 MKIYKDIITGDEMFSDTYKMK-LVDEVIYEVTGRLVTRAQGDIQIEGFNXXXXXXXXXXX 516
M IY+D+I+ DEMFSD YK++ + D + EV G++V+R +G+I
Sbjct: 1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNAYGEGPEGE 60
Query: 515 RP*ERS*HSPEPQASRNIRFGD--KKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNK 342
+ + +++ K++Y Y+KDYMK + KLEE+ P++V+ F T +
Sbjct: 61 GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120
Query: 341 VMKDILGRFKELQFFTGESMDCDGMVAMMN 252
+K IL FK QFF GE+M+ DGMVA+++
Sbjct: 121 QIKHILANFKNYQFFIGENMNPDGMVALLD 150
>BC003352-1|AAH03352.1| 172|Homo sapiens tumor protein,
translationally-controlled 1 protein.
Length = 172
Score = 94.7 bits (225), Expect = 3e-19
Identities = 53/150 (35%), Positives = 85/150 (56%), Gaps = 3/150 (2%)
Frame = -3
Query: 692 MKIYKDIITGDEMFSDTYKMK-LVDEVIYEVTGRLVTRAQGDIQIEGFNXXXXXXXXXXX 516
M IY+D+I+ DEMFSD YK++ + D + EV G++V+R +G+I
Sbjct: 1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60
Query: 515 RP*ERS*HSPEPQASRNIRFGD--KKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNK 342
+ + +++ K++Y Y+KDYMK + KLEE+ P++V+ F T +
Sbjct: 61 GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120
Query: 341 VMKDILGRFKELQFFTGESMDCDGMVAMMN 252
+K IL FK QFF GE+M+ DGMVA+++
Sbjct: 121 QIKHILANFKNYQFFIGENMNPDGMVALLD 150
>AY334563-1|AAQ01550.1| 172|Homo sapiens TCTP protein.
Length = 172
Score = 94.7 bits (225), Expect = 3e-19
Identities = 53/150 (35%), Positives = 85/150 (56%), Gaps = 3/150 (2%)
Frame = -3
Query: 692 MKIYKDIITGDEMFSDTYKMK-LVDEVIYEVTGRLVTRAQGDIQIEGFNXXXXXXXXXXX 516
M IY+D+I+ DEMFSD YK++ + D + EV G++V+R +G+I
Sbjct: 1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60
Query: 515 RP*ERS*HSPEPQASRNIRFGD--KKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNK 342
+ + +++ K++Y Y+KDYMK + KLEE+ P++V+ F T +
Sbjct: 61 GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120
Query: 341 VMKDILGRFKELQFFTGESMDCDGMVAMMN 252
+K IL FK QFF GE+M+ DGMVA+++
Sbjct: 121 QIKHILANFKNYQFFIGENMNPDGMVALLD 150
>AY117678-1|AAM51565.1| 172|Homo sapiens p02 protein protein.
Length = 172
Score = 94.7 bits (225), Expect = 3e-19
Identities = 53/150 (35%), Positives = 85/150 (56%), Gaps = 3/150 (2%)
Frame = -3
Query: 692 MKIYKDIITGDEMFSDTYKMK-LVDEVIYEVTGRLVTRAQGDIQIEGFNXXXXXXXXXXX 516
M IY+D+I+ DEMFSD YK++ + D + EV G++V+R +G+I
Sbjct: 1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60
Query: 515 RP*ERS*HSPEPQASRNIRFGD--KKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNK 342
+ + +++ K++Y Y+KDYMK + KLEE+ P++V+ F T +
Sbjct: 61 GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120
Query: 341 VMKDILGRFKELQFFTGESMDCDGMVAMMN 252
+K IL FK QFF GE+M+ DGMVA+++
Sbjct: 121 QIKHILANFKNYQFFIGENMNPDGMVALLD 150
>AL138963-4|CAH72035.1| 188|Homo sapiens tumor protein,
translationally-controlled 1 protein.
Length = 188
Score = 94.7 bits (225), Expect = 3e-19
Identities = 53/150 (35%), Positives = 85/150 (56%), Gaps = 3/150 (2%)
Frame = -3
Query: 692 MKIYKDIITGDEMFSDTYKMK-LVDEVIYEVTGRLVTRAQGDIQIEGFNXXXXXXXXXXX 516
M IY+D+I+ DEMFSD YK++ + D + EV G++V+R +G+I
Sbjct: 1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60
Query: 515 RP*ERS*HSPEPQASRNIRFGD--KKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNK 342
+ + +++ K++Y Y+KDYMK + KLEE+ P++V+ F T +
Sbjct: 61 GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120
Query: 341 VMKDILGRFKELQFFTGESMDCDGMVAMMN 252
+K IL FK QFF GE+M+ DGMVA+++
Sbjct: 121 QIKHILANFKNYQFFIGENMNPDGMVALLD 150
>AL138963-3|CAH72034.1| 172|Homo sapiens tumor protein,
translationally-controlled 1 protein.
Length = 172
Score = 94.7 bits (225), Expect = 3e-19
Identities = 53/150 (35%), Positives = 85/150 (56%), Gaps = 3/150 (2%)
Frame = -3
Query: 692 MKIYKDIITGDEMFSDTYKMK-LVDEVIYEVTGRLVTRAQGDIQIEGFNXXXXXXXXXXX 516
M IY+D+I+ DEMFSD YK++ + D + EV G++V+R +G+I
Sbjct: 1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60
Query: 515 RP*ERS*HSPEPQASRNIRFGD--KKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNK 342
+ + +++ K++Y Y+KDYMK + KLEE+ P++V+ F T +
Sbjct: 61 GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120
Query: 341 VMKDILGRFKELQFFTGESMDCDGMVAMMN 252
+K IL FK QFF GE+M+ DGMVA+++
Sbjct: 121 QIKHILANFKNYQFFIGENMNPDGMVALLD 150
>AJ400717-1|CAB87812.1| 172|Homo sapiens translationally controlled
tumor protein (TCTP) protein.
Length = 172
Score = 94.7 bits (225), Expect = 3e-19
Identities = 53/150 (35%), Positives = 85/150 (56%), Gaps = 3/150 (2%)
Frame = -3
Query: 692 MKIYKDIITGDEMFSDTYKMK-LVDEVIYEVTGRLVTRAQGDIQIEGFNXXXXXXXXXXX 516
M IY+D+I+ DEMFSD YK++ + D + EV G++V+R +G+I
Sbjct: 1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60
Query: 515 RP*ERS*HSPEPQASRNIRFGD--KKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNK 342
+ + +++ K++Y Y+KDYMK + KLEE+ P++V+ F T +
Sbjct: 61 GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120
Query: 341 VMKDILGRFKELQFFTGESMDCDGMVAMMN 252
+K IL FK QFF GE+M+ DGMVA+++
Sbjct: 121 QIKHILANFKNYQFFIGENMNPDGMVALLD 150
>BC022436-1|AAH22436.1| 138|Homo sapiens TPT1 protein protein.
Length = 138
Score = 72.5 bits (170), Expect = 1e-12
Identities = 32/66 (48%), Positives = 47/66 (71%)
Frame = -3
Query: 449 KKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKELQFFTGESMDCDG 270
K++Y Y+KDYMK + KLEE+ P++V+ F T + +K IL FK QFF GE+M+ DG
Sbjct: 51 KEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDG 110
Query: 269 MVAMMN 252
MVA+++
Sbjct: 111 MVALLD 116
>AL138963-2|CAH72033.1| 138|Homo sapiens tumor protein,
translationally-controlled 1 protein.
Length = 138
Score = 72.5 bits (170), Expect = 1e-12
Identities = 32/66 (48%), Positives = 47/66 (71%)
Frame = -3
Query: 449 KKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKELQFFTGESMDCDG 270
K++Y Y+KDYMK + KLEE+ P++V+ F T + +K IL FK QFF GE+M+ DG
Sbjct: 51 KEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDG 110
Query: 269 MVAMMN 252
MVA+++
Sbjct: 111 MVALLD 116
>AY572224-1|AAS76644.1| 140|Homo sapiens TPT1-like protein protein.
Length = 140
Score = 62.1 bits (144), Expect = 2e-09
Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 3/138 (2%)
Frame = -3
Query: 707 LQSIKMKIYKDIITGDEMFSDTY-KMKLVDEVIYEVTGRLVTRAQGDIQIEGFNXXXXXX 531
++++ M IY D+I+ EMFSD+Y ++ D + EV G++V+R +G+I
Sbjct: 1 METVIMIIYWDLISHSEMFSDSYMSQEIADGLRLEVEGKIVSRTEGNIFDSLIGGNASAE 60
Query: 530 XXXXXRP*ERS*HSPEPQASRNIRFGD--KKSYTLYLKDYMKKLVAKLEEKAPDQVEVFK 357
+ + +++ K++Y +KDYMK + KLEE+ P +V+ F
Sbjct: 61 GPEGKGTESTVITGVDSVMNHHLQETSFTKEAYNKCIKDYMKSIKGKLEEQRPKRVKPFM 120
Query: 356 TNMNKVMKDILGRFKELQ 303
T + +K IL FK Q
Sbjct: 121 TGAAEQIKHILANFKNYQ 138
>AK126598-1|BAC86606.1| 140|Homo sapiens protein ( Homo sapiens
cDNA FLJ44635 fis, clone BRACE2023744, highly similar
to Translationally controlled tumor protein. ).
Length = 140
Score = 60.1 bits (139), Expect = 8e-09
Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 3/138 (2%)
Frame = -3
Query: 707 LQSIKMKIYKDIITGDEMFSDTY-KMKLVDEVIYEVTGRLVTRAQGDIQIEGFNXXXXXX 531
++++ M Y D+I+ EMFSD+Y ++ D + EV G++V+R +G+I
Sbjct: 1 METVIMITYWDLISHSEMFSDSYMSQEIADGLRLEVEGKIVSRTEGNIFDSLIGGNASAE 60
Query: 530 XXXXXRP*ERS*HSPEPQASRNIRFGD--KKSYTLYLKDYMKKLVAKLEEKAPDQVEVFK 357
+ + +++ K++Y +KDYMK + KLEE+ P +V+ F
Sbjct: 61 GPEGKGTESTVITGVDSVMNHHLQETSFTKEAYNKCIKDYMKSIKGKLEEQRPKRVKPFM 120
Query: 356 TNMNKVMKDILGRFKELQ 303
T + +K IL FK Q
Sbjct: 121 TGAAEQIKHILANFKNYQ 138
>AY121805-1|AAM82753.1| 412|Homo sapiens BJ-HCC-24 tumor antigen
protein.
Length = 412
Score = 48.4 bits (110), Expect = 3e-05
Identities = 21/47 (44%), Positives = 33/47 (70%)
Frame = -3
Query: 392 EEKAPDQVEVFKTNMNKVMKDILGRFKELQFFTGESMDCDGMVAMMN 252
+E+ P++V+ F T + +K IL FK QFF GE+M+ DGMVA+++
Sbjct: 344 DEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLD 390
>AK000037-1|BAA90897.1| 412|Homo sapiens protein ( Homo sapiens
cDNA FLJ20030 fis, clone ADSU02156. ).
Length = 412
Score = 48.4 bits (110), Expect = 3e-05
Identities = 21/47 (44%), Positives = 33/47 (70%)
Frame = -3
Query: 392 EEKAPDQVEVFKTNMNKVMKDILGRFKELQFFTGESMDCDGMVAMMN 252
+E+ P++V+ F T + +K IL FK QFF GE+M+ DGMVA+++
Sbjct: 344 DEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLD 390
>AF072098-1|AAD48084.1| 114|Homo sapiens HDCMB21P protein.
Length = 114
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/42 (47%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = -3
Query: 692 MKIYKDIITGDEMFSDTYKMK-LVDEVIYEVTGRLVTRAQGD 570
M IY+D+I+ DEMFSD YK++ + D + EV G++V+R +G+
Sbjct: 1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGN 42
>BC117259-1|AAI17260.1| 1581|Homo sapiens LOC200383 protein protein.
Length = 1581
Score = 30.7 bits (66), Expect = 5.9
Identities = 12/48 (25%), Positives = 29/48 (60%)
Frame = -3
Query: 422 DYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKELQFFTGESMD 279
+ +++LVA ++ + P+++E+ + + +KD+ GR L G+ +D
Sbjct: 1279 EIVQELVASVQTRVPEKLEMEGASESLFVKDLQGRLNSLTTVLGQEVD 1326
>AK027182-1|BAB15685.1| 366|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23529 fis, clone LNG06042. ).
Length = 366
Score = 30.7 bits (66), Expect = 5.9
Identities = 12/48 (25%), Positives = 29/48 (60%)
Frame = -3
Query: 422 DYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKELQFFTGESMD 279
+ +++LVA ++ + P+++E+ + + +KD+ GR L G+ +D
Sbjct: 64 EIVQELVASVQTRVPEKLEMEGASESLFVKDLQGRLNSLTTVLGQEVD 111
>AB051484-1|BAB21788.2| 2182|Homo sapiens KIAA1697 protein protein.
Length = 2182
Score = 30.7 bits (66), Expect = 5.9
Identities = 12/48 (25%), Positives = 29/48 (60%)
Frame = -3
Query: 422 DYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKELQFFTGESMD 279
+ +++LVA ++ + P+++E+ + + +KD+ GR L G+ +D
Sbjct: 1880 EIVQELVASVQTRVPEKLEMEGASESLFVKDLQGRLNSLTTVLGQEVD 1927
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,791,810
Number of Sequences: 237096
Number of extensions: 2218927
Number of successful extensions: 4286
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4283
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -