Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120556.Seq
         (798 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    24   1.6  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    24   1.6  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    24   1.6  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    23   2.1  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   2.1  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   2.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.8  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   6.5  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   8.6  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   8.6  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -1

Query: 519 AYTPIVDDETEKVHGVP 469
           A+TP+ DD  EK +GVP
Sbjct: 192 AHTPLTDDHDEK-YGVP 207


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/16 (56%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
 Frame = +3

Query: 462 HHMGHHALSQ--SHHR 503
           HHMGHH   Q   HH+
Sbjct: 165 HHMGHHMQEQHPQHHQ 180


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/16 (56%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
 Frame = +3

Query: 462 HHMGHHALSQ--SHHR 503
           HHMGHH   Q   HH+
Sbjct: 167 HHMGHHMQEQHPQHHQ 182


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 555 LKTMKVLFYNVFFIL 599
           +KT  +LF+ VFFI+
Sbjct: 1   MKTFVILFFGVFFII 15


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 459 YHHMGHHALSQSH 497
           +HH GHH  +Q H
Sbjct: 323 HHHAGHHIHAQHH 335


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = +3

Query: 531 SLDFVMQQLKT-MKVLFYNVFFILQCAMCRDHYMNVKGFLIYHIELIEIALDKEKYGTDI 707
           S D V + L+T +  +F +    L   + ++   +++ FL  H E I++    +KY  DI
Sbjct: 118 SKDAVWRNLRTKLSPVFTSGKMKLMFPLMQECVDDLRRFLEDHTEEIDVKTAMKKYSVDI 177


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 155 TPLFSRYKDSYLLYSFRLIDLLRASKSAHLTKLC 256
           T L    K+ Y++ + RLI +   ++S  L K+C
Sbjct: 822 TELVLMLKNRYIILNGRLIKMETKAQSVALGKIC 855


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 577 FTTYFSYYSAPCAAII 624
           FT Y+ YYS   A+II
Sbjct: 154 FTVYYIYYSVHEASII 169


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 570 VLFYNVFFILQCAMCRDHYMNVKGFLIYHIELIEI 674
           V+F  V+FIL  A     Y NV     ++  LI+I
Sbjct: 162 VVFDLVYFILAFACISIAYTNVSTDAFFYTCLIQI 196


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 366 HGLATVSHRIYGQNH 410
           HG  T SH  Y QN+
Sbjct: 291 HGHNTSSHNYYAQNY 305


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,866
Number of Sequences: 336
Number of extensions: 4588
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)