Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120556.Seq
         (798 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1976|AAF48332.1|  802|Drosophila melanogaster CG11071-P...    31   1.8  
X56232-1|CAA39689.1|  568|Drosophila melanogaster disco gene pro...    31   2.4  
BT003295-1|AAO25055.1|  568|Drosophila melanogaster GH27656p pro...    31   2.4  
AE014298-2336|ABC67185.1|  568|Drosophila melanogaster CG9908-PB...    31   2.4  
AE014298-2335|AAF48568.1|  568|Drosophila melanogaster CG9908-PA...    31   2.4  
AY075311-1|AAL68178.1|  223|Drosophila melanogaster AT31946p pro...    30   3.2  
AE014297-2353|AAF55419.1|  206|Drosophila melanogaster CG5866-PA...    30   3.2  
AE014134-592|AAS64618.1| 1205|Drosophila melanogaster CG3304-PC,...    30   3.2  
X59772-1|CAB36921.1|  850|Drosophila melanogaster ovo protein pr...    29   5.6  
U11383-1|AAB60216.1| 1028|Drosophila melanogaster Ovo-1028aa pro...    29   5.6  
AJ430589-1|CAD23207.1| 1222|Drosophila melanogaster ovoA protein...    29   5.6  
BT022159-1|AAY51785.1| 1224|Drosophila melanogaster IP01381p pro...    29   9.7  
BT009981-1|AAQ22450.1| 1281|Drosophila melanogaster RE54443p pro...    29   9.7  
AY119525-1|AAM50179.1| 2019|Drosophila melanogaster GH15728p pro...    29   9.7  
AE014298-704|AAS65261.1| 1281|Drosophila melanogaster CG32767-PB...    29   9.7  
AE014298-703|AAF46005.2| 1281|Drosophila melanogaster CG32767-PA...    29   9.7  
AE014296-292|AAF47517.1| 2019|Drosophila melanogaster CG13917-PA...    29   9.7  

>AE014298-1976|AAF48332.1|  802|Drosophila melanogaster CG11071-PA
           protein.
          Length = 802

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +3

Query: 384 SHRIYGQNHRTQFAFVPPQEFYLHVYHHMGHHALSQSHHR 503
           S  I+  N R++   +     Y H +HH  HH   Q HH+
Sbjct: 547 SDGIHSTNKRSRLHHLETDPSYPHHHHHHHHHHHQQQHHQ 586


>X56232-1|CAA39689.1|  568|Drosophila melanogaster disco gene
           protein.
          Length = 568

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +3

Query: 387 HRIYGQNHRTQFAFVPPQEFYLHVYHHMGHHALSQSHH 500
           H++  Q+ + Q   +     +   +HH+GHH +   HH
Sbjct: 507 HQLQQQHQQEQHHHLTLSHHHQEQHHHLGHHHMGHHHH 544


>BT003295-1|AAO25055.1|  568|Drosophila melanogaster GH27656p
           protein.
          Length = 568

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +3

Query: 387 HRIYGQNHRTQFAFVPPQEFYLHVYHHMGHHALSQSHH 500
           H++  Q+ + Q   +     +   +HH+GHH +   HH
Sbjct: 507 HQLQQQHQQEQHHHLTLSHHHQEQHHHLGHHHMGHHHH 544


>AE014298-2336|ABC67185.1|  568|Drosophila melanogaster CG9908-PB,
           isoform B protein.
          Length = 568

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +3

Query: 387 HRIYGQNHRTQFAFVPPQEFYLHVYHHMGHHALSQSHH 500
           H++  Q+ + Q   +     +   +HH+GHH +   HH
Sbjct: 507 HQLQQQHQQEQHHHLTLSHHHQEQHHHLGHHHMGHHHH 544


>AE014298-2335|AAF48568.1|  568|Drosophila melanogaster CG9908-PA,
           isoform A protein.
          Length = 568

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +3

Query: 387 HRIYGQNHRTQFAFVPPQEFYLHVYHHMGHHALSQSHH 500
           H++  Q+ + Q   +     +   +HH+GHH +   HH
Sbjct: 507 HQLQQQHQQEQHHHLTLSHHHQEQHHHLGHHHMGHHHH 544


>AY075311-1|AAL68178.1|  223|Drosophila melanogaster AT31946p
           protein.
          Length = 223

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 453 HVYHHMGHHALSQSHH 500
           HV+HH GHH+   +HH
Sbjct: 12  HVHHHEGHHSPEMTHH 27


>AE014297-2353|AAF55419.1|  206|Drosophila melanogaster CG5866-PA
           protein.
          Length = 206

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 19/55 (34%), Positives = 24/55 (43%)
 Frame = +3

Query: 336 DRMGH*RIPRHGLATVSHRIYGQNHRTQFAFVPPQEFYLHVYHHMGHHALSQSHH 500
           D   H  +P   L+      + + H  QF    P E   H YH  GHH LS+ HH
Sbjct: 43  DASVHQIVPNESLSAGKEHQHQRVHLYQFQS-HPHEHGPH-YHLEGHHHLSEPHH 95


>AE014134-592|AAS64618.1| 1205|Drosophila melanogaster CG3304-PC,
           isoform C protein.
          Length = 1205

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 438 QEFYLHVYHHMGHHALSQSHH 500
           Q  +LH++HH  HH  SQ HH
Sbjct: 929 QHQHLHMHHHHHHHHGSQHHH 949


>X59772-1|CAB36921.1|  850|Drosophila melanogaster ovo protein
           protein.
          Length = 850

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 14/46 (30%), Positives = 19/46 (41%)
 Frame = +3

Query: 363 RHGLATVSHRIYGQNHRTQFAFVPPQEFYLHVYHHMGHHALSQSHH 500
           +H  A   H IY Q  + Q      Q+ + H +H        QSHH
Sbjct: 432 QHAAAYQQHNIYAQQQQQQQQQHHQQQQHHHFHHQQQQQPQPQSHH 477


>U11383-1|AAB60216.1| 1028|Drosophila melanogaster Ovo-1028aa
           protein.
          Length = 1028

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 14/46 (30%), Positives = 19/46 (41%)
 Frame = +3

Query: 363 RHGLATVSHRIYGQNHRTQFAFVPPQEFYLHVYHHMGHHALSQSHH 500
           +H  A   H IY Q  + Q      Q+ + H +H        QSHH
Sbjct: 432 QHAAAYQQHNIYAQQQQQQQQQHHQQQQHHHFHHQQQQQPQPQSHH 477


>AJ430589-1|CAD23207.1| 1222|Drosophila melanogaster ovoA protein
           protein.
          Length = 1222

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 14/46 (30%), Positives = 19/46 (41%)
 Frame = +3

Query: 363 RHGLATVSHRIYGQNHRTQFAFVPPQEFYLHVYHHMGHHALSQSHH 500
           +H  A   H IY Q  + Q      Q+ + H +H        QSHH
Sbjct: 804 QHAAAYQQHNIYAQQQQQQQQQHHQQQQHHHFHHQQQQQPQPQSHH 849


>BT022159-1|AAY51785.1| 1224|Drosophila melanogaster IP01381p
           protein.
          Length = 1224

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 432 PPQEFYLHVYHHMGHHALSQSHHRR 506
           P Q  ++H +HH  HH  S SH ++
Sbjct: 7   PHQHTHVHHHHHSQHHPHSHSHQQQ 31


>BT009981-1|AAQ22450.1| 1281|Drosophila melanogaster RE54443p
           protein.
          Length = 1281

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 432 PPQEFYLHVYHHMGHHALSQSHHRR 506
           P Q  ++H +HH  HH  S SH ++
Sbjct: 64  PHQHTHVHHHHHSQHHPHSHSHQQQ 88


>AY119525-1|AAM50179.1| 2019|Drosophila melanogaster GH15728p
           protein.
          Length = 2019

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 17/46 (36%), Positives = 17/46 (36%)
 Frame = +3

Query: 396 YGQNHRTQFAFVPPQEFYLHVYHHMGHHALSQSHHRR*VYTRDKSS 533
           Y   H  Q   V P        HH   H  SQ HH    YT D SS
Sbjct: 323 YSFQHNAQHFSVLPLGSSPKFTHHQHQHNQSQQHHPDLSYTTDYSS 368


>AE014298-704|AAS65261.1| 1281|Drosophila melanogaster CG32767-PB,
           isoform B protein.
          Length = 1281

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 432 PPQEFYLHVYHHMGHHALSQSHHRR 506
           P Q  ++H +HH  HH  S SH ++
Sbjct: 64  PHQHTHVHHHHHSQHHPHSHSHQQQ 88


>AE014298-703|AAF46005.2| 1281|Drosophila melanogaster CG32767-PA,
           isoform A protein.
          Length = 1281

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 432 PPQEFYLHVYHHMGHHALSQSHHRR 506
           P Q  ++H +HH  HH  S SH ++
Sbjct: 64  PHQHTHVHHHHHSQHHPHSHSHQQQ 88


>AE014296-292|AAF47517.1| 2019|Drosophila melanogaster CG13917-PA
           protein.
          Length = 2019

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 17/46 (36%), Positives = 17/46 (36%)
 Frame = +3

Query: 396 YGQNHRTQFAFVPPQEFYLHVYHHMGHHALSQSHHRR*VYTRDKSS 533
           Y   H  Q   V P        HH   H  SQ HH    YT D SS
Sbjct: 323 YSFQHNAQHFSVLPLGSSPKFTHHQHQHNQSQQHHPDLSYTTDYSS 368


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,338,051
Number of Sequences: 53049
Number of extensions: 819886
Number of successful extensions: 2895
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2835
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)