Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120555.Seq
         (783 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    30   0.018
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    26   0.30 
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    25   0.52 
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    25   0.52 
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    25   0.52 
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    24   1.2  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   4.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 30.3 bits (65), Expect = 0.018
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -2

Query: 158  GVHFPHPTKCNAFYMCVGINHRLELLCSEGFEFDPNVKDC 39
            G + P P  CNA+Y CV +    +  C+ G  ++   K C
Sbjct: 1106 GQYVPDPHNCNAYYRCV-LGELRKQYCAGGLHWNKERKIC 1144



 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -2

Query: 743  KPAGVLVKRRVLSARKLA*LGYNLLTLRRFV 651
            KP G L+   V  +R++   GY++ TL +++
Sbjct: 1977 KPKGWLLSAAVSPSRRVVDAGYDVPTLSKYL 2007


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 protein.
          Length = 980

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
 Frame = -2

Query: 143  HPTK--CNAFYMCVGINHRLELLCSEGFEFDPNVKDC-VPISDYGC 15
            HP K  C  +YMC G   +  + C     F+P+   C  P +  GC
Sbjct: 925  HPDKADCRMYYMCEG-ERKHHMPCPSNLVFNPDQNVCDWPENVEGC 969


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -2

Query: 149 FPHPTKCNAFYMCVGINHRLEL-LCSEGFEFD 57
           +PH T C+ ++ C   N+  EL  C  G  FD
Sbjct: 32  YPHHTSCDKYWKC--DNNVAELKTCGNGLAFD 61


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -2

Query: 149 FPHPTKCNAFYMCVGINHRLEL-LCSEGFEFD 57
           +PH T C+ ++ C   N+  EL  C  G  FD
Sbjct: 32  YPHHTSCDKYWKC--DNNVAELKTCGNGLAFD 61


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 16/54 (29%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
 Frame = -2

Query: 185 EFSC--VNRPIGVHFPH---PTKCNAFYMCVGINHRLELLCSEGFEFDPNVKDC 39
           +F C  VN  +    P    P  C  FY+C+  +      C  G  FD   K C
Sbjct: 169 QFECPKVNETVAATHPRYADPDDCQYFYVCINGDTPRRSGCKLGQVFDDVGKKC 222


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 339 YNFSDHTMERYHPYQRAP 392
           YNF +H  +R++   RAP
Sbjct: 402 YNFLNHNFDRHYEENRAP 419


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = -2

Query: 119 YMCVGINHRLELLCSEGFEFDPNVKDCVPISDYGCTAN 6
           YM  G+  R    C   F+  PN K  +PI     TAN
Sbjct: 414 YMPFGVGPRN---CIAKFDIVPNGKTVIPIKISPSTAN 448


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,353
Number of Sequences: 336
Number of extensions: 3198
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)