Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120554.Seq
(822 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071699-1|AAL49321.1| 204|Drosophila melanogaster RH16768p pro... 77 2e-14
AE014297-2203|AAN13709.1| 204|Drosophila melanogaster CG14881-P... 77 2e-14
AE014297-2202|AAF55311.2| 286|Drosophila melanogaster CG14881-P... 77 2e-14
X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros... 32 0.82
AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein ... 31 1.4
AE014296-896|AAF47934.1| 99|Drosophila melanogaster CG13713-PA... 31 1.4
X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros... 31 1.9
BT016088-1|AAV36973.1| 690|Drosophila melanogaster LD41913p pro... 31 2.5
BT011178-1|AAR88539.1| 690|Drosophila melanogaster RE44946p pro... 31 2.5
AE014296-3196|AAN11655.2| 600|Drosophila melanogaster CG8765-PB... 31 2.5
AE014296-3195|AAF49125.1| 690|Drosophila melanogaster CG8765-PA... 31 2.5
>AY071699-1|AAL49321.1| 204|Drosophila melanogaster RH16768p
protein.
Length = 204
Score = 77.4 bits (182), Expect = 2e-14
Identities = 41/89 (46%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = +2
Query: 2 SRAHLQKRTPKDGTDREAYLSLLVDEYLHSSSYEAKLQVLANLANFAYDPVNYSYIRDVG 181
S L++RTP G DR Y+ LVDEY +++ EA+ QV ANLANFAYDP+N+S++ +
Sbjct: 4 SHRTLKRRTPAQGIDRREYIGHLVDEYYTTTNIEAQQQVTANLANFAYDPINWSHLLEAD 63
Query: 182 VLDIFLYVLKNETIGRLIRYAIAG-AAIC 265
LD+F+ L ET +L++ + G AA+C
Sbjct: 64 ALDVFVASL--ETQDQLLK--VHGIAALC 88
Score = 30.7 bits (66), Expect = 2.5
Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Frame = +1
Query: 256 CNLCLDPLNADYILTHLGLKPLFRLLKSSDTDTVADTITTLIYMYNEKTKTEITDQDVIN 435
CNLCLD A +I LK L L +D + + +L Y E T++D++
Sbjct: 88 CNLCLDKTAAKFIREQ--LKLLTGLFVRTDHPEI--VLHSLALFYQLLEFGERTERDLLL 143
Query: 436 MMLNLKTTQ-------DLRIVNLSTLFLQD 504
L+T Q D RIV L L LQD
Sbjct: 144 SPAVLRTVQEWRVKAHDERIVKLCQLLLQD 173
>AE014297-2203|AAN13709.1| 204|Drosophila melanogaster CG14881-PB,
isoform B protein.
Length = 204
Score = 77.4 bits (182), Expect = 2e-14
Identities = 41/89 (46%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = +2
Query: 2 SRAHLQKRTPKDGTDREAYLSLLVDEYLHSSSYEAKLQVLANLANFAYDPVNYSYIRDVG 181
S L++RTP G DR Y+ LVDEY +++ EA+ QV ANLANFAYDP+N+S++ +
Sbjct: 4 SHRTLKRRTPAQGIDRREYIGHLVDEYYTTTNIEAQQQVTANLANFAYDPINWSHLLEAD 63
Query: 182 VLDIFLYVLKNETIGRLIRYAIAG-AAIC 265
LD+F+ L ET +L++ + G AA+C
Sbjct: 64 ALDVFVASL--ETQDQLLK--VHGIAALC 88
Score = 30.7 bits (66), Expect = 2.5
Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Frame = +1
Query: 256 CNLCLDPLNADYILTHLGLKPLFRLLKSSDTDTVADTITTLIYMYNEKTKTEITDQDVIN 435
CNLCLD A +I LK L L +D + + +L Y E T++D++
Sbjct: 88 CNLCLDKTAAKFIREQ--LKLLTGLFVRTDHPEI--VLHSLALFYQLLEFGERTERDLLL 143
Query: 436 MMLNLKTTQ-------DLRIVNLSTLFLQD 504
L+T Q D RIV L L LQD
Sbjct: 144 SPAVLRTVQEWRVKAHDERIVKLCQLLLQD 173
>AE014297-2202|AAF55311.2| 286|Drosophila melanogaster CG14881-PA,
isoform A protein.
Length = 286
Score = 77.4 bits (182), Expect = 2e-14
Identities = 41/89 (46%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = +2
Query: 2 SRAHLQKRTPKDGTDREAYLSLLVDEYLHSSSYEAKLQVLANLANFAYDPVNYSYIRDVG 181
S L++RTP G DR Y+ LVDEY +++ EA+ QV ANLANFAYDP+N+S++ +
Sbjct: 4 SHRTLKRRTPAQGIDRREYIGHLVDEYYTTTNIEAQQQVTANLANFAYDPINWSHLLEAD 63
Query: 182 VLDIFLYVLKNETIGRLIRYAIAG-AAIC 265
LD+F+ L ET +L++ + G AA+C
Sbjct: 64 ALDVFVASL--ETQDQLLK--VHGIAALC 88
Score = 39.1 bits (87), Expect = 0.007
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 651 KAGDKIRIQKTLTQKDLDAFSNLTGDHNYLH 743
KA ++++ K +Q DL+ F+ TGDHNY+H
Sbjct: 167 KAVKQVQVVKRFSQSDLEQFAQFTGDHNYIH 197
Score = 32.7 bits (71), Expect = 0.62
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +2
Query: 737 SPSEQRKRKPIVHGALLNGLVAGLIGT 817
+P+E+R+ VHGALLN +VAG++GT
Sbjct: 201 TPTEERR----VHGALLNAVVAGIMGT 223
>X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein (
Drosophila melanogastertransposable element 297. ).
Length = 1059
Score = 32.3 bits (70), Expect = 0.82
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 283 ADYILTHLGLKPLFRLLKSSDTDTVA-DTITTLIYMYNEKTKTEITDQ 423
AD H + R++ SSD + V I T++Y YN+K K + T Q
Sbjct: 910 ADVERLHKTINEKIRIINSSDDEEVKLSKIETILYTYNQKIKHDTTGQ 957
>AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein
protein.
Length = 1006
Score = 31.5 bits (68), Expect = 1.4
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 283 ADYILTHLGLKPLFRLLKS-SDTDTVADTITTLIYMYNEKTKTEITDQDVINMML 444
AD H + R++ + +T+T I T++Y YN KTK + T Q ++ L
Sbjct: 857 ADIERFHKTINEKIRIINTMKNTETDLSKIETILYTYNHKTKHDTTGQTPAHIFL 911
>AE014296-896|AAF47934.1| 99|Drosophila melanogaster CG13713-PA
protein.
Length = 99
Score = 31.5 bits (68), Expect = 1.4
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +1
Query: 397 KTKTEITDQDVINMMLNLKT--TQDLRIVNLSTLF 495
+TK EITD+ + N + NLKT DL+ VN LF
Sbjct: 34 RTKIEITDELISNTVRNLKTCSLDDLKAVNRELLF 68
>X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein (
Drosophila melanogastercopia-like element 17.6. ).
Length = 1058
Score = 31.1 bits (67), Expect = 1.9
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 283 ADYILTHLGLKPLFRLLKSSDTD-TVADTITTLIYMYNEKTKTEITDQDVINMML 444
AD H + R++K+SD + T + T++ +YN KTK + T Q ++ L
Sbjct: 910 ADIERLHKTINEKIRIIKTSDDEETKLSKMETVLNIYNHKTKHDTTGQTPAHIFL 964
>BT016088-1|AAV36973.1| 690|Drosophila melanogaster LD41913p
protein.
Length = 690
Score = 30.7 bits (66), Expect = 2.5
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +1
Query: 334 KSSDTDTVADTITTLIYMYNEKTKTEITDQDVINMMLNLKTTQDLRIVNL 483
+SS T+ ++T +N+ T E D D I+ LN+++ + ++ L
Sbjct: 273 QSSSAATITSNVSTTSAAHNQSTNAEEEDDDPIHTFLNMESYFEKELITL 322
>BT011178-1|AAR88539.1| 690|Drosophila melanogaster RE44946p
protein.
Length = 690
Score = 30.7 bits (66), Expect = 2.5
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +1
Query: 334 KSSDTDTVADTITTLIYMYNEKTKTEITDQDVINMMLNLKTTQDLRIVNL 483
+SS T+ ++T +N+ T E D D I+ LN+++ + ++ L
Sbjct: 273 QSSSAATITSNVSTTSAAHNQSTNAEEEDDDPIHTFLNMESYFEKELITL 322
>AE014296-3196|AAN11655.2| 600|Drosophila melanogaster CG8765-PB,
isoform B protein.
Length = 600
Score = 30.7 bits (66), Expect = 2.5
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +1
Query: 334 KSSDTDTVADTITTLIYMYNEKTKTEITDQDVINMMLNLKTTQDLRIVNL 483
+SS T+ ++T +N+ T E D D I+ LN+++ + ++ L
Sbjct: 183 QSSSAATITSNVSTTSAAHNQSTNAEEEDDDPIHTFLNMESYFEKELITL 232
>AE014296-3195|AAF49125.1| 690|Drosophila melanogaster CG8765-PA,
isoform A protein.
Length = 690
Score = 30.7 bits (66), Expect = 2.5
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +1
Query: 334 KSSDTDTVADTITTLIYMYNEKTKTEITDQDVINMMLNLKTTQDLRIVNL 483
+SS T+ ++T +N+ T E D D I+ LN+++ + ++ L
Sbjct: 273 QSSSAATITSNVSTTSAAHNQSTNAEEEDDDPIHTFLNMESYFEKELITL 322
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,660,190
Number of Sequences: 53049
Number of extensions: 706432
Number of successful extensions: 1998
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1998
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3880595628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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