Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120554.Seq
(822 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64843-13|AAF98228.1| 355|Caenorhabditis elegans Hypothetical p... 30 1.7
AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical ... 30 1.7
Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z29117-8|CAA82380.1| 196|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z30423-1|CAA83003.1| 1681|Caenorhabditis elegans Hypothetical pr... 28 7.0
U64848-3|AAB04882.1| 323|Caenorhabditis elegans Hypothetical pr... 28 9.3
>U64843-13|AAF98228.1| 355|Caenorhabditis elegans Hypothetical
protein K06C4.8 protein.
Length = 355
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 453 FQI*HHIYNVLISYFS-FCFLIVHIYQCRYCISYSVCIT 340
F+I HHI NVL+ ++S F I I+ +Y S C+T
Sbjct: 281 FKIIHHISNVLLVFYSASTFFIYLIFSEKYRNVLSTCVT 319
>AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical
protein Y75B8A.4 protein.
Length = 773
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -2
Query: 218 FHSSAHTRIYLVLQRL*CMSSSQDHMQNLPNWLKLATLLHRNLS 87
F R+Y L RL M++ Q L NWL+L + L N S
Sbjct: 243 FSDEVSDRVYSELHRLKSMNAQQSEYNILMNWLELVSSLPWNTS 286
>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical protein
F16A11.3b protein.
Length = 1364
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +1
Query: 310 LKPLFRLLKSSDTDTVADTITTLIYMYNEKTKTEITDQDVINMMLNLKTTQDLRIVNLST 489
LK +FR L + V +I+ I+ EITD+D++ + +L+ Q+ + N
Sbjct: 864 LKLVFRKLAMDEQARVRQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDVRNGIL 923
Query: 490 LFLQDVLR 513
+ L D ++
Sbjct: 924 IHLYDFVK 931
>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical protein
F16A11.3a protein.
Length = 1490
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +1
Query: 310 LKPLFRLLKSSDTDTVADTITTLIYMYNEKTKTEITDQDVINMMLNLKTTQDLRIVNLST 489
LK +FR L + V +I+ I+ EITD+D++ + +L+ Q+ + N
Sbjct: 990 LKLVFRKLAMDEQARVRQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDVRNGIL 1049
Query: 490 LFLQDVLR 513
+ L D ++
Sbjct: 1050 IHLYDFVK 1057
>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical protein
F16A11.3b protein.
Length = 1364
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +1
Query: 310 LKPLFRLLKSSDTDTVADTITTLIYMYNEKTKTEITDQDVINMMLNLKTTQDLRIVNLST 489
LK +FR L + V +I+ I+ EITD+D++ + +L+ Q+ + N
Sbjct: 864 LKLVFRKLAMDEQARVRQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDVRNGIL 923
Query: 490 LFLQDVLR 513
+ L D ++
Sbjct: 924 IHLYDFVK 931
>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical protein
F16A11.3a protein.
Length = 1490
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +1
Query: 310 LKPLFRLLKSSDTDTVADTITTLIYMYNEKTKTEITDQDVINMMLNLKTTQDLRIVNLST 489
LK +FR L + V +I+ I+ EITD+D++ + +L+ Q+ + N
Sbjct: 990 LKLVFRKLAMDEQARVRQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDVRNGIL 1049
Query: 490 LFLQDVLR 513
+ L D ++
Sbjct: 1050 IHLYDFVK 1057
>Z29117-8|CAA82380.1| 196|Caenorhabditis elegans Hypothetical
protein C48B4.8 protein.
Length = 196
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 441 HHIYNVLISYFSFCFLIVHIYQCRYCISYSVCIT 340
H IY +L FSF F+ Y + C + ++C T
Sbjct: 86 HFIYCLLYIVFSFLFIPTFYYDQKICTNAAICKT 119
>Z30423-1|CAA83003.1| 1681|Caenorhabditis elegans Hypothetical
protein T20G5.1 protein.
Length = 1681
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 68 LVDEYLHSSSYEAKLQVLANLANFAYDP-VNYSYIR 172
L++ + + SYE L ++ NF+ DP V++ YI+
Sbjct: 700 LIEMFENHKSYEGLFYFLGSIVNFSQDPEVHFKYIQ 735
>U64848-3|AAB04882.1| 323|Caenorhabditis elegans Hypothetical
protein C50E3.7 protein.
Length = 323
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = -2
Query: 554 LVHYEVRLCNYSAGLNTSCRKSVDKLTILKSCVVFK 447
LVH V L N S L SC K +DK + K FK
Sbjct: 83 LVHLAVNLFNISVQL--SCVKFIDKRALFKKSTFFK 116
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,333,769
Number of Sequences: 27780
Number of extensions: 385668
Number of successful extensions: 1019
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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