Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120554.Seq
(822 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 26 0.48
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 26 0.48
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 26 0.48
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 26 0.48
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 26 0.48
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 26 0.48
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 25 0.85
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 6.0
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 22 7.9
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 7.9
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 7.9
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 22 7.9
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 25.8 bits (54), Expect = 0.48
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 558 LSNRFPYIIVNNKNYQKIC 614
LSN + Y NN NY+++C
Sbjct: 85 LSNNYNYSNYNNNNYKQLC 103
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 25.8 bits (54), Expect = 0.48
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 558 LSNRFPYIIVNNKNYQKIC 614
LSN + Y NN NY+++C
Sbjct: 85 LSNNYNYSNYNNNNYKQLC 103
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 25.8 bits (54), Expect = 0.48
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 558 LSNRFPYIIVNNKNYQKIC 614
LSN + Y NN NY+++C
Sbjct: 85 LSNNYNYSNYNNNNYKQLC 103
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 25.8 bits (54), Expect = 0.48
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 558 LSNRFPYIIVNNKNYQKIC 614
LSN + Y NN NY+++C
Sbjct: 85 LSNNYNYSNYNNNNYKQLC 103
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 25.8 bits (54), Expect = 0.48
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 558 LSNRFPYIIVNNKNYQKIC 614
LSN + Y NN NY+++C
Sbjct: 85 LSNNYNYSNYNNNNYKQLC 103
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 25.8 bits (54), Expect = 0.48
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 558 LSNRFPYIIVNNKNYQKIC 614
LSN + Y NN NY+++C
Sbjct: 85 LSNNYNYSNYNNNNYKQLC 103
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 25.0 bits (52), Expect = 0.85
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 267 TQIAAPAMAYLINLPIVSFFSTYKNISS 184
T I + L +P+VSFFST +S+
Sbjct: 223 TSIQVANLLRLFRIPLVSFFSTSPELSN 250
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 22.2 bits (45), Expect = 6.0
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 244 HCGCCNLCLDPLNA 285
H C LCLD +NA
Sbjct: 351 HSDSCCLCLDSMNA 364
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 21.8 bits (44), Expect = 7.9
Identities = 9/45 (20%), Positives = 21/45 (46%)
Frame = +2
Query: 71 VDEYLHSSSYEAKLQVLANLANFAYDPVNYSYIRDVGVLDIFLYV 205
VDEY H+ + L+++ ++ + + I + V ++V
Sbjct: 73 VDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWV 117
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.8 bits (44), Expect = 7.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 376 LIYMYNEKTKTEITDQDVINMMLNLKTTQDLRIVNL 483
L+ YN+ + + DV+ + + LK +Q L VNL
Sbjct: 36 LLSNYNKLVRPVVNTSDVLRVCIKLKLSQ-LIDVNL 70
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.8 bits (44), Expect = 7.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 376 LIYMYNEKTKTEITDQDVINMMLNLKTTQDLRIVNL 483
L+ YN+ + + DV+ + + LK +Q L VNL
Sbjct: 36 LLSNYNKLVRPVVNTSDVLRVCIKLKLSQ-LIDVNL 70
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.8 bits (44), Expect = 7.9
Identities = 11/41 (26%), Positives = 19/41 (46%)
Frame = +1
Query: 238 VCHCGCCNLCLDPLNADYILTHLGLKPLFRLLKSSDTDTVA 360
V CG P N Y+ T +G + L + + + +T+A
Sbjct: 282 VFDCGGLEFTAAPFNGWYMSTEIGSRDLCDVQRYNLLETIA 322
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,094
Number of Sequences: 438
Number of extensions: 4893
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26217432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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