Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120550.Seq
(831 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13642-4|AAG00043.2| 687|Caenorhabditis elegans Hypothetical pr... 35 0.082
Z11126-7|CAO82061.1| 522|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z11126-6|CAA77471.2| 480|Caenorhabditis elegans Hypothetical pr... 30 2.3
U41557-7|AAQ01534.1| 381|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 29 3.1
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 29 3.1
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 4.1
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 29 4.1
AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical... 29 4.1
Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical p... 28 7.1
AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical... 28 7.1
AF068713-6|AAC17797.1| 282|Caenorhabditis elegans Serpentine re... 28 7.1
Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical pr... 28 9.4
AF003390-3|AAB54272.1| 1308|Caenorhabditis elegans Hypothetical ... 28 9.4
>U13642-4|AAG00043.2| 687|Caenorhabditis elegans Hypothetical
protein ZC395.8 protein.
Length = 687
Score = 34.7 bits (76), Expect = 0.082
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +1
Query: 79 RENNIFDAPKTGGKGRVKSLPTPVANSPLSPVRQPPKSN---IKPPTRISLPTRTFSA 243
+E + PK + S+P P SP P+ PP ++ + PP LPTR SA
Sbjct: 518 KEETEEEQPKEENNSTLPSIPIPSIFSPYEPIVPPPATSPDPMNPPIASLLPTRILSA 575
>Z11126-7|CAO82061.1| 522|Caenorhabditis elegans Hypothetical
protein ZK643.3b protein.
Length = 522
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 564 IRDAPLAIIDSKTTRAHGFCMLWFTSKSRWTILTA*TYAVKNAIYI 701
+ DAPL+ S+ + H FC L F+ + R+ LT T+ + A+Y+
Sbjct: 282 VNDAPLS---SQVFQNHLFCRLLFSIQLRYLRLTNFTWMLAEAVYL 324
>Z11126-6|CAA77471.2| 480|Caenorhabditis elegans Hypothetical
protein ZK643.3a protein.
Length = 480
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 564 IRDAPLAIIDSKTTRAHGFCMLWFTSKSRWTILTA*TYAVKNAIYI 701
+ DAPL+ S+ + H FC L F+ + R+ LT T+ + A+Y+
Sbjct: 282 VNDAPLS---SQVFQNHLFCRLLFSIQLRYLRLTNFTWMLAEAVYL 324
>U41557-7|AAQ01534.1| 381|Caenorhabditis elegans Hypothetical
protein C50F7.1b protein.
Length = 381
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 696 YITTFQRPRTKYILLSIWSTSAISQREVFYQYIFL*VW 809
Y T++ R TKY++ ++W +AI +Y Y + VW
Sbjct: 137 YNTSWDREYTKYVIFAVWLVAAIFGIPNWYNYDLI-VW 173
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +1
Query: 79 RENNIFDAPKTGGKGRVKSLPTPVANSPLSP--VRQPPKSNIKPPTRISLPTRTFSANPL 252
+E + + PK K V ++ + +P S V PP+ NI PPT P + +A +
Sbjct: 170 KEEKVKEDPKKDDKSGVDTIKKEGSTAPASTALVPPPPRQNIPPPTPRRPPPKKKNACCV 229
Query: 253 D 255
D
Sbjct: 230 D 230
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 29.5 bits (63), Expect = 3.1
Identities = 24/100 (24%), Positives = 35/100 (35%)
Frame = +1
Query: 70 RFFRENNIFDAPKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTRTFSANP 249
RFF N + G S T + S LSP + PT S T T SA+P
Sbjct: 130 RFFCRNKCDSGLEQDGSATSTST-TSITTSTLSPPSTVQSTTTAKPTTTSTITPTTSADP 188
Query: 250 LDAXSAAAL*VKNQSSTEKMDILCRPSLVTNWKVCPRTAT 369
+ + + ST + P+ P ++T
Sbjct: 189 TSTITTSTTPNPSSPSTVQSTTTAEPTSTITSTTVPESST 228
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 118 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 231
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 118 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 231
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 118 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 231
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 118 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 231
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical
protein ZC101.2b protein.
Length = 1160
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 118 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 231
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 118 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 231
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 118 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 231
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 118 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 231
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 118 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 231
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 118 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 231
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical
protein Y69A2AR.14 protein.
Length = 555
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +1
Query: 118 KGRVKSLPTPVANSPL-SPVR--QPPKSNIKPPT 210
+ R K P V +PL +P+R QPP NIKP T
Sbjct: 384 RNRKKEKPKVVRKAPLRAPIRPRQPPNQNIKPIT 417
>Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical
protein H38K22.1 protein.
Length = 1570
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 100 APKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRIS 219
+PK GR +S PTP NS +PV K+ IK +S
Sbjct: 1498 SPKKRVSGR-RSAPTPTKNSKKAPVSPKKKTLIKETNGVS 1536
>AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical
protein H38K22.1 protein.
Length = 1570
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 100 APKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRIS 219
+PK GR +S PTP NS +PV K+ IK +S
Sbjct: 1498 SPKKRVSGR-RSAPTPTKNSKKAPVSPKKKTLIKETNGVS 1536
>AF068713-6|AAC17797.1| 282|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 67 protein.
Length = 282
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = -3
Query: 613 CARVVFESIIASGASRIAHVLLRSLFVFYRTACKFPVMRISLLFI*PIM*LVENFSVAF 437
C+ +VF+ + +G +L +F R ++R SLLFI + ++ FS F
Sbjct: 57 CSIIVFKLYVLAGMISKTFILKNIIFFVIRATVILGIIRTSLLFIISLDRIIALFSSQF 115
>Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical
protein R09E10.9 protein.
Length = 443
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 130 KSLPTPVANSPLSPVRQPPK-SNIKPPTRISLPTRTFSANPLDAXSAA 270
K +P P S ++P P + PPT +LP+ + S P+ S A
Sbjct: 357 KVVPNPPQKSLITPTVPPSMIQTVNPPTVSALPSPSVSPAPVPTTSCA 404
>AF003390-3|AAB54272.1| 1308|Caenorhabditis elegans Hypothetical
protein R155.2 protein.
Length = 1308
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 620 LYVVVHIEKPLDDSDRIDICCQKCYLYHNVPKTSYEIYPSINLV 751
L+ VH + L D DI YL+H +P+ + + P ++L+
Sbjct: 22 LWNTVHGAQLLPDLGTDDIGKNNEYLFHRIPRATDNLIPIVSLI 65
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,759,425
Number of Sequences: 27780
Number of extensions: 441846
Number of successful extensions: 1453
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1448
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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