Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120550.Seq
(831 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g01840.1 68418.m00103 ovate family protein 59% similar to ova... 32 0.54
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 31 0.71
At5g57625.1 68418.m07199 allergen V5/Tpx-1-related family protei... 30 1.6
At5g56890.1 68418.m07099 protein kinase family protein contains ... 30 1.6
At5g43100.1 68418.m05261 aspartyl protease family protein low si... 30 1.6
At3g45510.1 68416.m04914 zinc finger (C3HC4-type RING finger) fa... 30 2.2
At2g26640.1 68415.m03196 beta-ketoacyl-CoA synthase, putative si... 30 2.2
At1g62660.1 68414.m07071 beta-fructosidase (BFRUCT3) / beta-fruc... 29 2.9
At2g24570.1 68415.m02934 WRKY family transcription factor identi... 29 3.8
At4g30680.1 68417.m04349 MA3 domain-containing protein similar t... 29 5.0
At2g44630.1 68415.m05555 kelch repeat-containing F-box family pr... 29 5.0
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 29 5.0
At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin fa... 29 5.0
At4g35240.1 68417.m05009 expressed protein contains Pfam domains... 28 6.6
At4g39820.1 68417.m05641 expressed protein 28 8.7
At4g09030.1 68417.m01490 arabinogalactan-protein (AGP10) identic... 28 8.7
At3g53180.1 68416.m05860 glutamine synthetase, putative similar ... 28 8.7
At3g20850.1 68416.m02636 proline-rich family protein contains pr... 28 8.7
>At5g01840.1 68418.m00103 ovate family protein 59% similar to ovate
protein (GI:23429649) [Lycopersicon esculentum];
contains TIGRFAM TIGR01568 : uncharacterized
plant-specific domain TIGR01568
Length = 270
Score = 31.9 bits (69), Expect = 0.54
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +1
Query: 79 RENNIFDAPK-TGGKGRVKSLPTPVANSPLS--PVRQPPKSNIKPPTRISLPTRTFSANP 249
++ N+ P T K + ++PTP + +PLS P R+P S+ PP S P R S N
Sbjct: 28 KKKNLQSQPNSTTSKKKHHAVPTPTSTTPLSPRPPRRPSHSSKAPP---SHPPRKSSGNR 84
Query: 250 L 252
L
Sbjct: 85 L 85
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 31.5 bits (68), Expect = 0.71
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 6/60 (10%)
Frame = +1
Query: 88 NIFDAPKTGGKGRVKSLPTPV------ANSPLSPVRQPPKSNIKPPTRISLPTRTFSANP 249
N+ A + SLPTP A P SP +PP + KPPT + P + + P
Sbjct: 17 NVVFAASNEESNALVSLPTPTLPSPSPATKPPSPALKPPTPSYKPPTLPTTPIKPPTTKP 76
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 145 PVANSPLSPVRQPPKSNIKPPTRISLPTR 231
P N P +PV+ P +KPPT + TR
Sbjct: 185 PTYNPPTTPVKPPTAPPVKPPTPPPVRTR 213
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 5/46 (10%)
Frame = +1
Query: 127 VKSLPTPVANSP--LSPVRQPPKSNIKPPTR---ISLPTRTFSANP 249
VK TP SP P +PP S +KPPT + PT T P
Sbjct: 139 VKPPTTPPVQSPPVQPPTYKPPTSPVKPPTTTPPVKPPTTTPPVQP 184
>At5g57625.1 68418.m07199 allergen V5/Tpx-1-related family protein
low similarity to SP|Q40374 Pathogenesis-related protein
PR-1 precursor {Medicago truncatula}; contains Pfam
profile PF00188: SCP-like extracellular protein
Length = 207
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 139 PTPVANSPLSPVRQP-PKSNIKPPTRISLPTRTFSANPLDAXSA 267
PTP P P+ P PK +PPT SLP + + LD +A
Sbjct: 38 PTPYVPKPRYPLPSPSPKPVYRPPTTPSLPAGSIARLFLDPHNA 81
>At5g56890.1 68418.m07099 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 1113
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 97 DAPKTGG-KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTRTFSAN 246
DAPK GRV P PV+ SP+S + P + PPT ++P R S N
Sbjct: 138 DAPKEPPFSGRVT--PAPVS-SPVSDIPPIPSVALPPPTPSNVPPRNASNN 185
>At5g43100.1 68418.m05261 aspartyl protease family protein low
similarity to CND41, chloroplast nucleoid DNA binding
protein [Nicotiana tabacum] GI:2541876; contains Pfam
profile PF00026: Eukaryotic aspartyl protease
Length = 631
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +1
Query: 61 TMNRFFRENNIFDAPKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKP-PTRISLPT 228
T+ + REN+ KT + L P + +P SP+ Q SNI P P PT
Sbjct: 399 TLVTYDRENDKLGFLKTNCSDIWRRLAAPESPAPTSPISQNKSSNISPSPATSESPT 455
>At3g45510.1 68416.m04914 zinc finger (C3HC4-type RING finger)
family protein contains a zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 257
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = +2
Query: 530 KYKKTTEQHMSDSRCTTCNYRFKDNTRAWFLYVVVHIEKPLDDSDRIDICCQKC 691
K ++ EQ + + CN N + W L + + DD R CC KC
Sbjct: 131 KQREMWEQRIKEESIPVCNRFHCPNPKCWALMSKTELTESTDDGVR--RCCSKC 182
>At2g26640.1 68415.m03196 beta-ketoacyl-CoA synthase, putative
similar to beta-ketoacyl-CoA synthase [Simmondsia
chinensis][GI:1045614]
Length = 509
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +2
Query: 71 VFFERITFLTRQRPVARAVSNLCQRLSPTRRC--RLFVSRQNLTSNHLRASL 220
VF I F+TR RPV V+ C + +R+C ++F+ R LT + +L
Sbjct: 86 VFLMTIYFMTRPRPV-YLVNFSCFKPDESRKCTKKIFMDRSKLTGSFTEENL 136
>At1g62660.1 68414.m07071 beta-fructosidase (BFRUCT3) /
beta-fructofuranosidase / invertase, vacuolar identical
to beta-fructosidase GB:CAA67560 GI:1429209 [Arabidopsis
thaliana]; supported by full-length cDNA GI:14517549;
identical to cDNA Beta-fructosidase GI:3115854
Length = 648
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 68 FIVTVG*HSKINTILCTFSHR 6
F VT G HSK+NT+ CT + R
Sbjct: 527 FYVTKGKHSKLNTVFCTDTSR 547
>At2g24570.1 68415.m02934 WRKY family transcription factor identical
to WRKY transcription factor 17 GI:15991743 from
[Arabidopsis thaliana]
Length = 321
Score = 29.1 bits (62), Expect = 3.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 169 PVRQPPKSNIKPPTRISLPTRTFSANP 249
PV PP S++ PP +++ P T + P
Sbjct: 76 PVHSPPSSSVPPPVKVTTPAPTQISAP 102
>At4g30680.1 68417.m04349 MA3 domain-containing protein similar to
SP|Q03387 Eukaryotic initiation factor (iso)4F subunit
P82-34 (eIF-(iso)4F P82-34) {Triticum aestivum};
contains Pfam profile PF02847: MA3 domain
Length = 263
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +1
Query: 115 GKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPT 228
G + K +P+P + P QP + PPT SL T
Sbjct: 64 GSQQPKPVPSPTRQTVEKPKPQPQPQEVAPPTTTSLNT 101
>At2g44630.1 68415.m05555 kelch repeat-containing F-box family
protein similar to SKP1 interacting partner 6
[Arabidopsis thaliana] GI:10716957; contains Pfam
profiles PF00646: F-box domain, PF01344: Kelch motif
Length = 372
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 151 ANSPLSPVRQPPKSNIKPPTRISLP 225
A+ P QPP S++ PP+ SLP
Sbjct: 4 ADEPPQKTNQPPSSSLTPPSLFSLP 28
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +1
Query: 133 SLPTPVANSPLSPVRQPPKSNIKPPTRISLPTRTFSANP 249
S P P SP PV PP + PP P FS P
Sbjct: 566 SPPPPHVYSPPPPVASPPPPSPPPPVHSPPPPPVFSPPP 604
Score = 28.3 bits (60), Expect = 6.6
Identities = 20/43 (46%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 127 VKSLPTPVANSPL-SPV-RQPPKSNIKPPTRISLPTRTFSANP 249
V S P PV + P SPV PP S+ PP S P TFS P
Sbjct: 599 VFSPPPPVFSPPPPSPVYSPPPPSHSPPPPVYSPPPPTFSPPP 641
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/41 (43%), Positives = 19/41 (46%)
Frame = +1
Query: 127 VKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTRTFSANP 249
V S P PVA SP P PP + PP S P FS P
Sbjct: 572 VYSPPPPVA-SPPPPSPPPPVHSPPPPPVFSPPPPVFSPPP 611
>At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin
family protein similar to arabinogalactan protein
[Daucus carota] GI:11322245; contains Pfam profile
PF01190: Pollen proteins Ole e I family
Length = 359
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 106 KTGGKGRVKSLPTPVANSPLSPVRQPP-KSNIKPPTR 213
K+ K VK+ +P A P+ P PP K+ +KPPT+
Sbjct: 69 KSPVKPPVKAPVSPPAKPPVKPPVYPPTKAPVKPPTK 105
>At4g35240.1 68417.m05009 expressed protein contains Pfam domains,
PF04782: Protein of unknown function (DUF632) and
PF04783: Protein of unknown function (DUF630)
Length = 828
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +1
Query: 52 PTVTMNRFFRENNIFDAPKTGGKGRVKSLPTPVANSPLSPVRQPPKSN 195
P N +F +N P G G + T A P P PP+SN
Sbjct: 229 PYPPQNSYFGYSNPVPGPGPGYYGSSSASTTAAATKPPPPPPSPPRSN 276
>At4g39820.1 68417.m05641 expressed protein
Length = 408
Score = 27.9 bits (59), Expect = 8.7
Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 3/116 (2%)
Frame = +3
Query: 195 HQTTYAHLFAYAHFFGQSVGRXFSSSIVSKKPVVNRKDGYFVPPEFGNKLESLPAYSDKL 374
H+ H F H+ +S + + S P R +P + GN+ E L L
Sbjct: 128 HELNSLHDFDGTHYRYESFPEIYPNRRGSMVPFSLRWLYALIPTKLGNRQEGLDRLYVLL 187
Query: 375 DFKQERDLRMHFMSDLERNI--MKATLKFSTNYIMGY-INSKDMRMTGNLQAVL*N 533
DF ++R +R LE ++ K F N ++G+ + K+ ++ +L L N
Sbjct: 188 DFVRDR-IREKESQSLESSVELWKKRETFVMNCLLGFHLGHKEFGVSLDLMKELIN 242
>At4g09030.1 68417.m01490 arabinogalactan-protein (AGP10) identical
to gi|10880497|gb|AAG24278; supported by Ceres cDNA
265772
Length = 127
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +1
Query: 139 PTPVANSPLSPVRQPPKSNIKPPTRISLPTRTFSANPLDA 258
P P SPL QPP++ P+ PT T SA P A
Sbjct: 26 PAPT-RSPLPSPAQPPRTAAPTPSITPTPTPTPSATPTAA 64
>At3g53180.1 68416.m05860 glutamine synthetase, putative similar to
glutamine synthetase (glutamate--ammonia ligase)
[Bacillus subtilis] SWISS-PROT:P12425
Length = 845
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2
Query: 281 TYNAAAEXASNGLAEKVRVGKEMRVG 204
TY + E A NGL E +R GK +R+G
Sbjct: 186 TY-VSKEVAENGLVEVLRAGKPVRIG 210
>At3g20850.1 68416.m02636 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 134
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = +1
Query: 61 TMNRFFRENNIFDAPKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPT 228
T N + +++ +P + PTPV + P + + PP PP + PT
Sbjct: 32 TYNNYQPQHSPLPSPVYSSPADLPPPPTPVYSPPPADLPPPPTPYYSPPADLPPPT 87
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,310,778
Number of Sequences: 28952
Number of extensions: 395824
Number of successful extensions: 1469
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1424
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1911862400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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